RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 BAG4O95429 457 aaKnown RBP12.76□□□□□ -0.37
CLCN6-208ENST00000494028 RXRBP28702 533 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 MCAMP43121 646 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 ZAP70P43403 619 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 PUM3Q15397 648 aaKnown RBP12.76□□□□□ -0.37
CLCN6-208ENST00000494028 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 CCDC152Q4G0S7 254 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 DSCC1Q9BVC3 393 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 SEC31BQ9NQW1 1179 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 CCNL1Q9UK58 526 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-208ENST00000494028 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 COL1A1P02452 1464 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-208ENST00000494028 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-208ENST00000494028 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
CLCN6-208ENST00000494028 GNPATO15228 680 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 BRD1O95696 1058 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 LAMB1P07942 1786 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 RPS6KB1P23443 525 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 PHKA1P46020 1223 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 CACNA1SQ13698 1873 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 SMIM5Q71RC9 77 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 AMIGO3Q86WK7 504 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
CLCN6-208ENST00000494028 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
CLCN6-208ENST00000494028 FOXP2O15409 715 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-208ENST00000494028 SLC5A1P13866 664 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
CLCN6-208ENST00000494028 PTMSP20962 102 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 PSMA5P28066 241 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 KRT32Q14532 448 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 TBC1D9BQ66K14 1250 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 LPIN2Q92539 896 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 APPBP2Q92624 585 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 NARFQ9UHQ1 456 aa12.74□□□□□ -0.37
CLCN6-208ENST00000494028 TRAK2O60296 914 aa12.73□□□□□ -0.37
CLCN6-208ENST00000494028 CYP21A2P08686 494 aa12.73□□□□□ -0.37
CLCN6-208ENST00000494028 UQCRFS1P1P0C7P4 283 aa12.73□□□□□ -0.37
CLCN6-208ENST00000494028 IGHMBP2P38935 993 aaKnown RBP12.73□□□□□ -0.37
CLCN6-208ENST00000494028 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLCN6-208ENST00000494028 LRRFIP1Q32MZ4 808 aaKnown RBP12.73□□□□□ -0.37
CLCN6-208ENST00000494028 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
CLCN6-208ENST00000494028 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
CLCN6-208ENST00000494028 PIH1D3Q9NQM4 214 aaKnown RBP12.73□□□□□ -0.37
CLCN6-208ENST00000494028 SH2B1Q9NRF2 756 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-208ENST00000494028 TCHHQ07283 1943 aa12.72□□□□□ -0.37
CLCN6-208ENST00000494028 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
CLCN6-208ENST00000494028 NRXN2Q9P2S2 1712 aa12.72□□□□□ -0.37
CLCN6-208ENST00000494028 ADD2P35612 726 aa12.72□□□□□ -0.37
CLCN6-208ENST00000494028 TOB2Q14106 344 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-208ENST00000494028 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
CLCN6-208ENST00000494028 CCDC83Q8IWF9 413 aa12.72□□□□□ -0.37
CLCN6-208ENST00000494028 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-208ENST00000494028 ZSCAN31Q96LW9 406 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-208ENST00000494028 TCEANC2Q96MN5 208 aa12.72□□□□□ -0.37
CLCN6-208ENST00000494028 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
CLCN6-208ENST00000494028 ALDH8A1Q9H2A2 487 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-208ENST00000494028 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
CLCN6-208ENST00000494028 LTBP1Q14766 1721 aa12.71□□□□□ -0.37
CLCN6-208ENST00000494028 A0A0G2JLW4 131 aa12.71□□□□□ -0.37
CLCN6-208ENST00000494028 HSPD1P10809 573 aaKnown RBP12.71□□□□□ -0.37
CLCN6-208ENST00000494028 ME3Q16798 604 aa12.71□□□□□ -0.37
CLCN6-208ENST00000494028 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
CLCN6-208ENST00000494028 MPHOSPH8Q99549 860 aa12.71□□□□□ -0.37
CLCN6-208ENST00000494028 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.37
CLCN6-208ENST00000494028 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 ZNF804BA4D1E1 1349 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 GOLGA6L22H0YM25 854 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 SNAP23O00161 211 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 CHRNDQ07001 517 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 RASGRF1Q13972 1273 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-208ENST00000494028 BICDL1Q6ZP65 573 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 NYXQ9GZU5 481 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
CLCN6-208ENST00000494028 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-208ENST00000494028 COL11A2P13942 1736 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-208ENST00000494028 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
CLCN6-208ENST00000494028 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
CLCN6-208ENST00000494028 GPAA1O43292 621 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 PDE6AP16499 860 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-208ENST00000494028 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLCN6-208ENST00000494028 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
CLCN6-208ENST00000494028 SMC3Q9UQE7 1217 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms