RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 TNNQ9UQP3 1299 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 HRH3Q9Y5N1 445 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 MAPK8IP3Q9UPT6 1336 aa7.72□□□□□ -1.17
CPSF7-213ENST00000494016 PIK3R4Q99570 1358 aa7.71□□□□□ -1.17
CPSF7-213ENST00000494016 PTCH1Q13635 1447 aa7.71□□□□□ -1.17
CPSF7-213ENST00000494016 CDK12Q9NYV4 1490 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-213ENST00000494016 MEN1O00255 615 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 ZBTB7BO15156 539 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-213ENST00000494016 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
CPSF7-213ENST00000494016 IGHDP01880 384 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 HMOX1P09601 288 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 CT47B1P0C2W7 299 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-213ENST00000494016 PDIA4P13667 645 aaKnown RBP7.71□□□□□ -1.18
CPSF7-213ENST00000494016 GPC1P35052 558 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 ATP1A2P50993 1020 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 CLDN10P78369 228 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 NFE2L2Q16236 605 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 SKAP1Q86WV1 359 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 CCDC82Q8N4S0 544 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 ZSCAN1Q8NBB4 408 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 TSR2Q969E8 191 aaKnown RBP7.71□□□□□ -1.18
CPSF7-213ENST00000494016 CNKSR1Q969H4 720 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 ESYT1Q9BSJ8 1104 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 USP31Q70CQ4 1352 aa7.71□□□□□ -1.18
CPSF7-213ENST00000494016 USP6P35125 1406 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 RLBP1P12271 317 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 GDF10P55107 478 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 CENPQQ7L2Z9 268 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-213ENST00000494016 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 PMFBP1Q8TBY8 1022 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 RNF217Q8TC41 542 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 NLRP3Q96P20 1036 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 DNAAF2Q9NVR5 837 aaKnown RBP7.7□□□□□ -1.18
CPSF7-213ENST00000494016 DNMT3LQ9UJW3 386 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 LRP6O75581 1613 aa7.7□□□□□ -1.18
CPSF7-213ENST00000494016 OVOS2A0A0J9YW53 1432 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 MST1RQ04912 1400 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 OVOS2Q6IE36 1432 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 ADGRL3Q9HAR2 1447 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 NCOA3Q9Y6Q9 1424 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 MAN1A2O60476 641 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 INHAP05111 366 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 ZNF853P0CG23 659 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 EIF4A2Q14240 407 aaKnown RBP7.69□□□□□ -1.18
CPSF7-213ENST00000494016 LARGE2Q8N3Y3 721 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 FRAT1Q92837 279 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-213ENST00000494016 BACH2Q9BYV9 841 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 VRTNQ9H8Y1 702 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 DLG5Q8TDM6 1919 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 TTC21AQ8NDW8 1320 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 PEAK1Q9H792 1746 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 DCCP43146 1447 aa7.69□□□□□ -1.18
CPSF7-213ENST00000494016 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 SOBPA7XYQ1 873 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 RFX1P22670 979 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 GMPRP36959 345 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 CENPCQ03188 943 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 PSME1Q06323 249 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.68□□□□□ -1.18
CPSF7-213ENST00000494016 NGDNQ8NEJ9 315 aaKnown RBP7.68□□□□□ -1.18
CPSF7-213ENST00000494016 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 FMN2Q9NZ56 1722 aa7.68□□□□□ -1.18
CPSF7-213ENST00000494016 FAM196BA6NMK8 535 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 DKK1O94907 266 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 RASA1P20936 1047 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 AAMPQ13685 434 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 HSP90AB2PQ58FF8 381 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 ZKSCAN2Q63HK3 967 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 CCDC102BQ68D86 513 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 SIX5Q8N196 739 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 TPCN2Q8NHX9 752 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 SLC4A9Q96Q91 983 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 THUMPD2Q9BTF0 503 aaKnown RBP7.67□□□□□ -1.18
CPSF7-213ENST00000494016 BCL2L13Q9BXK5 485 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 FHDC1Q9C0D6 1143 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-213ENST00000494016 ANKARQ7Z5J8 1434 aa7.67□□□□□ -1.18
CPSF7-213ENST00000494016 RGPD1P0DJD0 1748 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 VAMP4O75379 141 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 NEFMP07197 916 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 CANXP27824 592 aaKnown RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 PTK7Q13308 1070 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 ALDH1L2Q3SY69 923 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 ZNF772Q68DY9 489 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 LARP1Q6PKG0 1096 aaKnown RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 LYSMD3Q7Z3D4 306 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 AEBP1Q8IUX7 1158 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 ZNF594Q96JF6 807 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 ZNF358Q9NW07 568 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
CPSF7-213ENST00000494016 NXF1Q9UBU9 619 aaKnown RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 NOB1Q9ULX3 412 aaKnown RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 MARF1Q9Y4F3 1742 aaKnown RBP7.66□□□□□ -1.18
CPSF7-213ENST00000494016 SPATA31C2B4DYI2 1134 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms