RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 ZNF609O15014 1411 aa20.22■□□□□ 0.83
SATB1-217ENST00000493952 GNAI3P08754 354 aa20.22■□□□□ 0.83
SATB1-217ENST00000493952 MROH5Q6ZUA9 1318 aa20.22■□□□□ 0.83
SATB1-217ENST00000493952 VIL1P09327 827 aaKnown RBP20.21■□□□□ 0.83
SATB1-217ENST00000493952 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
SATB1-217ENST00000493952 COA1Q9GZY4 146 aa20.21■□□□□ 0.83
SATB1-217ENST00000493952 ADARB2Q9NS39 739 aaKnown RBP20.21■□□□□ 0.83
SATB1-217ENST00000493952 CNOT7Q9UIV1 285 aaKnown RBP20.21■□□□□ 0.83
SATB1-217ENST00000493952 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
SATB1-217ENST00000493952 CLEC11AQ9Y240 323 aa20.21■□□□□ 0.83
SATB1-217ENST00000493952 RLBP1P12271 317 aa20.2■□□□□ 0.82
SATB1-217ENST00000493952 PTPN12Q05209 780 aaKnown RBP20.2■□□□□ 0.82
SATB1-217ENST00000493952 C15orf52Q6ZUT6 534 aaKnown RBP20.2■□□□□ 0.82
SATB1-217ENST00000493952 USP50Q70EL3 339 aaPredicted RBP20.2■□□□□ 0.82
SATB1-217ENST00000493952 MICALL2Q8IY33 904 aa20.2■□□□□ 0.82
SATB1-217ENST00000493952 DZIP1LQ8IYY4 767 aaKnown RBP20.2■□□□□ 0.82
SATB1-217ENST00000493952 DPF2Q92785 391 aa20.2■□□□□ 0.82
SATB1-217ENST00000493952 ECM29Q5VYK3 1845 aa20.2■□□□□ 0.82
SATB1-217ENST00000493952 USP17L3A6NCW0 530 aa20.19■□□□□ 0.82
SATB1-217ENST00000493952 USP17L4A6NCW7 530 aa20.19■□□□□ 0.82
SATB1-217ENST00000493952 RPS12P25398 132 aaKnown RBP20.19■□□□□ 0.82
SATB1-217ENST00000493952 RSBN1LQ6PCB5 846 aaPredicted RBP20.19■□□□□ 0.82
SATB1-217ENST00000493952 USP17L1Q7RTZ2 530 aa20.19■□□□□ 0.82
SATB1-217ENST00000493952 VGLL2Q8N8G2 317 aa20.19■□□□□ 0.82
SATB1-217ENST00000493952 EYA2O00167 538 aa20.18■□□□□ 0.82
SATB1-217ENST00000493952 METTL24Q5JXM2 366 aa20.18■□□□□ 0.82
SATB1-217ENST00000493952 TRPM4Q8TD43 1214 aa20.18■□□□□ 0.82
SATB1-217ENST00000493952 RCAN3Q9UKA8 241 aa20.18■□□□□ 0.82
SATB1-217ENST00000493952 H7C1D1 291 aa20.17■□□□□ 0.82
SATB1-217ENST00000493952 APLP1P51693 650 aa20.17■□□□□ 0.82
SATB1-217ENST00000493952 UBE4AQ14139 1066 aa20.17■□□□□ 0.82
SATB1-217ENST00000493952 MAP1SQ66K74 1059 aaPredicted RBP20.17■□□□□ 0.82
SATB1-217ENST00000493952 ITPRIPQ8IWB1 547 aa20.17■□□□□ 0.82
SATB1-217ENST00000493952 CD209Q9NNX6 404 aa20.17■□□□□ 0.82
SATB1-217ENST00000493952 PDE8BO95263 885 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
SATB1-217ENST00000493952 GNAI2P04899 355 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 HIRAP54198 1017 aaPredicted RBP20.16■□□□□ 0.82
SATB1-217ENST00000493952 MTX1Q13505 466 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 DACT2Q5SW24 774 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 ATG9AQ7Z3C6 839 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 SAMD7Q7Z3H4 446 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 ZNF804AQ7Z570 1209 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 AGBL3Q8NEM8 1001 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 FBXW7Q969H0 707 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 GMLQ99445 158 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 MXD3Q9BW11 206 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 SIL1Q9H173 461 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 PA2G4Q9UQ80 394 aaKnown RBP20.16■□□□□ 0.82
SATB1-217ENST00000493952 PASKQ96RG2 1323 aa20.16■□□□□ 0.82
SATB1-217ENST00000493952 EGFRP00533 1210 aa20.15■□□□□ 0.82
SATB1-217ENST00000493952 STRIP1Q5VSL9 837 aa20.15■□□□□ 0.82
SATB1-217ENST00000493952 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
SATB1-217ENST00000493952 PANK1Q8TE04 598 aa20.15■□□□□ 0.82
SATB1-217ENST00000493952 SRGAP3O43295 1099 aa20.14■□□□□ 0.81
SATB1-217ENST00000493952 IL1R1P14778 569 aa20.14■□□□□ 0.81
SATB1-217ENST00000493952 HTRA3P83110 453 aa20.14■□□□□ 0.81
SATB1-217ENST00000493952 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.81
SATB1-217ENST00000493952 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.81
SATB1-217ENST00000493952 COPRSQ9NQ92 184 aa20.14■□□□□ 0.81
SATB1-217ENST00000493952 FBXO3Q9UK99 471 aa20.14■□□□□ 0.81
SATB1-217ENST00000493952 CIAO1O76071 339 aa20.13■□□□□ 0.81
SATB1-217ENST00000493952 GYG1P46976 350 aa20.13■□□□□ 0.81
SATB1-217ENST00000493952 GTF2IP78347 998 aa20.13■□□□□ 0.81
SATB1-217ENST00000493952 TTLL5Q6EMB2 1281 aa20.13■□□□□ 0.81
SATB1-217ENST00000493952 FAM84BQ96KN1 310 aaPredicted RBP20.13■□□□□ 0.81
SATB1-217ENST00000493952 MYO3BQ8WXR4 1341 aa20.12■□□□□ 0.81
SATB1-217ENST00000493952 ZBTB7BO15156 539 aaPredicted RBP20.12■□□□□ 0.81
SATB1-217ENST00000493952 FGFR2P21802 821 aa20.12■□□□□ 0.81
SATB1-217ENST00000493952 ZNF280AP59817 542 aaPredicted RBP20.12■□□□□ 0.81
SATB1-217ENST00000493952 C1orf115Q9H7X2 142 aa20.12■□□□□ 0.81
SATB1-217ENST00000493952 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
SATB1-217ENST00000493952 USP17L8P0C7I0 530 aa20.11■□□□□ 0.81
SATB1-217ENST00000493952 PUM3Q15397 648 aaKnown RBP20.11■□□□□ 0.81
SATB1-217ENST00000493952 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
SATB1-217ENST00000493952 RBM26Q5T8P6 1007 aaKnown RBP20.11■□□□□ 0.81
SATB1-217ENST00000493952 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
SATB1-217ENST00000493952 MS4A1P11836 297 aa20.1■□□□□ 0.81
SATB1-217ENST00000493952 HIBADHP31937 336 aaKnown RBP20.1■□□□□ 0.81
SATB1-217ENST00000493952 IL15P40933 162 aaPredicted RBP20.1■□□□□ 0.81
SATB1-217ENST00000493952 TDRD7Q8NHU6 1098 aaKnown RBP20.1■□□□□ 0.81
SATB1-217ENST00000493952 ZC3H15Q8WU90 426 aaKnown RBP20.1■□□□□ 0.81
SATB1-217ENST00000493952 FMR1Q06787 632 aaKnown RBP eCLIP20.09■□□□□ 0.81
SATB1-217ENST00000493952 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
SATB1-217ENST00000493952 CERS5Q8N5B7 392 aa20.09■□□□□ 0.81
SATB1-217ENST00000493952 MYOZ2Q9NPC6 264 aa20.09■□□□□ 0.81
SATB1-217ENST00000493952 JAG2Q9Y219 1238 aa20.09■□□□□ 0.81
SATB1-217ENST00000493952 CEP350Q5VT06 3117 aa20.08■□□□□ 0.81
SATB1-217ENST00000493952 KIAA0825Q8IV33 1275 aa20.08■□□□□ 0.81
SATB1-217ENST00000493952 LPIN2Q92539 896 aa20.08■□□□□ 0.81
SATB1-217ENST00000493952 GLIS2Q9BZE0 524 aaPredicted RBP20.08■□□□□ 0.81
SATB1-217ENST00000493952 CEP126Q9P2H0 1117 aa20.08■□□□□ 0.81
SATB1-217ENST00000493952 ASTN2O75129 1339 aaPredicted RBP20.07■□□□□ 0.8
SATB1-217ENST00000493952 FAM205AQ6ZU69 1335 aa20.07■□□□□ 0.8
SATB1-217ENST00000493952 TRAF5O00463 557 aa20.07■□□□□ 0.8
SATB1-217ENST00000493952 SASH1O94885 1247 aa20.07■□□□□ 0.8
SATB1-217ENST00000493952 IFIT1P09914 478 aaKnown RBP20.07■□□□□ 0.8
SATB1-217ENST00000493952 SLC5A1P13866 664 aa20.07■□□□□ 0.8
SATB1-217ENST00000493952 MVPQ14764 893 aaKnown RBP20.07■□□□□ 0.8
SATB1-217ENST00000493952 CAVIN4Q5BKX8 364 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms