RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RNF187Q5TA31 235 aaPredicted RBP6.37□□□□□ -1.39
GTF3A-208ENST00000493903 PRPF40BQ6NWY9 871 aaKnown RBP6.37□□□□□ -1.39
GTF3A-208ENST00000493903 NLRP13Q86W25 1043 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 C3orf58Q8NDZ4 430 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 GMCL1Q96IK5 515 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 NT5C1AQ9BXI3 368 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 ZFYVE1Q9HBF4 777 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 USP20Q9Y2K6 914 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 MRPL42Q9Y6G3 142 aaKnown RBP6.37□□□□□ -1.39
GTF3A-208ENST00000493903 XYLBO75191 536 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 EDN3P14138 238 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 CCDC85BQ15834 202 aaPredicted RBP6.36□□□□□ -1.39
GTF3A-208ENST00000493903 SV2BQ7L1I2 683 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 C1orf127Q8N9H9 656 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 GLIS3Q8NEA6 775 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 CNTNAP3BQ96NU0 1288 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 ZIC5Q96T25 663 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 CHMP4AQ9BY43 222 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 CNTNAP3Q9BZ76 1288 aa6.36□□□□□ -1.39
GTF3A-208ENST00000493903 hCG_2014768A0A024R1R8 64 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 A0A1W2PNR3 127 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 U2SURPO15042 1029 aaKnown RBP6.35□□□□□ -1.39
GTF3A-208ENST00000493903 CES1P23141 567 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 GBP2P32456 591 aaPredicted RBP6.35□□□□□ -1.39
GTF3A-208ENST00000493903 MAP3K10Q02779 954 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 UBAP2LQ14157 1087 aaKnown RBP6.35□□□□□ -1.39
GTF3A-208ENST00000493903 GAS6Q14393 721 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 EFHC2Q5JST6 749 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 TTC39BQ5VTQ0 682 aaPredicted RBP6.35□□□□□ -1.39
GTF3A-208ENST00000493903 FOXR1Q6PIV2 292 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 ANKS3Q6ZW76 656 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 KLRG1Q96E93 195 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 GPATCH3Q96I76 525 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 TRIM55Q9BYV6 548 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 EHD4Q9H223 541 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 METTL14Q9HCE5 456 aaKnown RBP6.35□□□□□ -1.39
GTF3A-208ENST00000493903 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 EFR3BQ9Y2G0 817 aa6.35□□□□□ -1.39
GTF3A-208ENST00000493903 A0A1W2PP55 124 aa6.34□□□□□ -1.39
GTF3A-208ENST00000493903 KLF4O43474 513 aa6.34□□□□□ -1.39
GTF3A-208ENST00000493903 TYRO3Q06418 890 aa6.34□□□□□ -1.39
GTF3A-208ENST00000493903 RAB33AQ14088 237 aa6.34□□□□□ -1.39
GTF3A-208ENST00000493903 LBRQ14739 615 aaKnown RBP6.34□□□□□ -1.39
GTF3A-208ENST00000493903 LRRC69Q6ZNQ3 347 aa6.34□□□□□ -1.39
GTF3A-208ENST00000493903 ZNF296Q8WUU4 475 aaPredicted RBP6.34□□□□□ -1.39
GTF3A-208ENST00000493903 EAF1Q96JC9 268 aaPredicted RBP6.34□□□□□ -1.39
GTF3A-208ENST00000493903 TRERF1Q96PN7 1200 aa6.34□□□□□ -1.39
GTF3A-208ENST00000493903 CWC22Q9HCG8 908 aaKnown RBP6.34□□□□□ -1.39
GTF3A-208ENST00000493903 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
GTF3A-208ENST00000493903 NOP58Q9Y2X3 529 aaKnown RBP6.34□□□□□ -1.39
GTF3A-208ENST00000493903 SUPT16HQ9Y5B9 1047 aaKnown RBP6.34□□□□□ -1.39
GTF3A-208ENST00000493903 MINDY4BA8MYZ0 360 aa6.33□□□□□ -1.4
GTF3A-208ENST00000493903 GRNP28799 593 aaKnown RBP6.33□□□□□ -1.4
GTF3A-208ENST00000493903 RHOVQ96L33 236 aa6.33□□□□□ -1.4
GTF3A-208ENST00000493903 SRPK1Q96SB4 655 aaKnown RBP6.33□□□□□ -1.4
GTF3A-208ENST00000493903 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 BNIP3LO60238 219 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 GREM1O60565 184 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 ETFBP38117 255 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 FCGRTP55899 365 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 ANAPC15P60006 121 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 PLEKHG4Q58EX7 1191 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 NLRP8Q86W28 1048 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 PHC3Q8NDX5 983 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 ABHD17AQ96GS6 310 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 RNPC3Q96LT9 517 aaKnown RBP6.32□□□□□ -1.4
GTF3A-208ENST00000493903 CEP63Q96MT8 703 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 OXCT2Q9BYC2 517 aaPredicted RBP6.32□□□□□ -1.4
GTF3A-208ENST00000493903 ZCCHC2Q9C0B9 1178 aaKnown RBP6.32□□□□□ -1.4
GTF3A-208ENST00000493903 CEP44Q9C0F1 390 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 PRKAG3Q9UGI9 489 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
GTF3A-208ENST00000493903 PRKAB1Q9Y478 270 aa6.32□□□□□ -1.4
GTF3A-208ENST00000493903 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 MARCH6O60337 910 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 RAB11FIP3O75154 756 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
GTF3A-208ENST00000493903 INSM1Q01101 510 aaPredicted RBP6.31□□□□□ -1.4
GTF3A-208ENST00000493903 LMNB2Q03252 620 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 TNNI3KQ59H18 835 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 SAMD5Q5TGI4 173 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 PEAR1Q5VY43 1037 aaPredicted RBP6.31□□□□□ -1.4
GTF3A-208ENST00000493903 PCNX4Q63HM2 1172 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 FBXL19Q6PCT2 694 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 FIGNL1Q6PIW4 674 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 DTHD1Q6ZMT9 781 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 MICAL1Q8TDZ2 1067 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 CPLX3Q8WVH0 158 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 DEPDC7Q96QD5 511 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 SRRTQ9BXP5 876 aaKnown RBP6.31□□□□□ -1.4
GTF3A-208ENST00000493903 ABCB6Q9NP58 842 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 MBIPQ9NS73 344 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 NDFIP2Q9NV92 336 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 GJA3Q9Y6H8 435 aa6.31□□□□□ -1.4
GTF3A-208ENST00000493903 DCDC2BA2VCK2 349 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 PHF20L1A8MW92 1017 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 ATXN7O15265 892 aaPredicted RBP6.3□□□□□ -1.4
GTF3A-208ENST00000493903 GARTP22102 1010 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms