RNA–Protein interactions for RNA: ENST00000493855.1

CCT6A-208, Transcript of chaperonin containing TCP1 subunit 6A, human

TSL 2

Gene CCT6A, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT6A-208	ENST00000493855	HOXD8	P13378	290 aa	Predicted RBP	4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	CPB1	P15086	417 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	PTPRA	P18433	802 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	GBP2	P32456	591 aa	Predicted RBP	4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	PCBP4	P57723	403 aa	Known RBP	4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	CTBS	Q01459	385 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	UBAP2L	Q14157	1087 aa	Known RBP	4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	CEP135	Q66GS9	1140 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	TPTE2	Q6XPS3	522 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	METTL16	Q86W50	562 aa	Known RBP	4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	CCNJL	Q8IV13	435 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	TRPM4	Q8TD43	1214 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	SLC16A10	Q8TF71	515 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	UBXN4	Q92575	508 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	PBX4	Q9BYU1	374 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	DZANK1	Q9NVP4	752 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855	PCDHGB7	Q9Y5F8	929 aa		4.63	□□□□□ -1.67
CCT6A-208	ENST00000493855		A0A096LPE4	126 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855		A0A1W2PPZ6	126 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855		J3QW42	95 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	ARAF	P10398	606 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	ATP2B1	P20020	1258 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	DNAJA1	P31689	397 aa	Known RBP	4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	ADH7	P40394	386 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	ARID5A	Q03989	594 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	PTPN12	Q05209	780 aa	Known RBP	4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	GRIN2C	Q14957	1233 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	MAP3K11	Q16584	847 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	ZNF394	Q53GI3	561 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	FAM117B	Q6P1L5	589 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	SV2B	Q7L1I2	683 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	CEP120	Q8N960	986 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	NANOS1	Q8WY41	292 aa	Known RBP	4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	RASSF4	Q9H2L5	321 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	ACBD3	Q9H3P7	528 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	ABCB6	Q9NP58	842 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	MBIP	Q9NS73	344 aa		4.62	□□□□□ -1.67
CCT6A-208	ENST00000493855	EIF4EBP3	O60516	100 aa	Predicted RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	IGSF3	O75054	1194 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	FBXO24	O75426	580 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	ACPP	P15309	386 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	ARL4D	P49703	201 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	ATP11A	P98196	1134 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	SNAP47	Q5SQN1	464 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	LDLRAD1	Q5T700	205 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	COL13A1	Q5TAT6	717 aa	Predicted RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	KIAA0825	Q8IV33	1275 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	CACTIN-AS1	Q8N1I8	211 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	GOLGA6L1	Q8N7Z2	621 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	BSND	Q8WZ55	320 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	PLD4	Q96BZ4	506 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	SPATA32	Q96LK8	384 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	TCF12	Q99081	682 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	SPON2	Q9BUD6	331 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	SMG9	Q9H0W8	520 aa	Known RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	NXF1	Q9UBU9	619 aa	Known RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	DDX41	Q9UJV9	622 aa	Known RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	GDF2	Q9UK05	429 aa	Predicted RBP	4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	SLC6A14	Q9UN76	642 aa		4.61	□□□□□ -1.67
CCT6A-208	ENST00000493855	NEURL1B	A8MQ27	555 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	MINDY4B	A8MYZ0	360 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	TRPA1	O75762	1119 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	RGS9	O75916	674 aa	Predicted RBP	4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	RAD51AP2	Q09MP3	1159 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	GDF6	Q6KF10	455 aa	Predicted RBP	4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	NPAS3	Q8IXF0	933 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	GLIS3	Q8NEA6	775 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	TNFRSF25	Q93038	417 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	NXPE3	Q969Y0	559 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	CNTNAP3B	Q96NU0	1288 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	RSRP1	Q9BUV0	290 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	CNTNAP3	Q9BZ76	1288 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	LACRT	Q9GZZ8	138 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	CBX8	Q9HC52	389 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	TMEM39A	Q9NV64	488 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	KBTBD4	Q9NVX7	518 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	PRKAG2	Q9UGJ0	569 aa		4.6	□□□□□ -1.67
CCT6A-208	ENST00000493855	ELOA3C	A0A087WX78	387 aa	Predicted RBP	4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	ELOA3D	A6NLF2	546 aa	Predicted RBP	4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	METTL12	A8MUP2	240 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	SSB	P05455	408 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	ITPKA	P23677	461 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	CDC27	P30260	824 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	GRIA4	P48058	902 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	LIG3	P49916	1009 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	LRRC14	Q15048	493 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	SPRED3	Q2MJR0	410 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	ELOA3B	Q3SY89	546 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	TTBK2	Q6IQ55	1244 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	PSAPL1	Q6NUJ1	521 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	SLC43A3	Q8NBI5	491 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	C3orf58	Q8NDZ4	430 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	ELOA3	Q8NG57	546 aa		4.59	□□□□□ -1.67
CCT6A-208	ENST00000493855	ANKRD24	Q8TF21	1146 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms