RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 G3V3G9 751 aa22.1■■□□□ 1.13
PDLIM7-208ENST00000493815 DCAF8Q5TAQ9 597 aa22.1■■□□□ 1.13
PDLIM7-208ENST00000493815 KCNQ5Q9NR82 932 aa22.1■■□□□ 1.13
PDLIM7-208ENST00000493815 YDJCA8MPS7 323 aa22.09■■□□□ 1.13
PDLIM7-208ENST00000493815 ECE2O60344 883 aa22.09■■□□□ 1.13
PDLIM7-208ENST00000493815 LPIN2Q92539 896 aa22.08■■□□□ 1.13
PDLIM7-208ENST00000493815 IL1RAPL2Q9NP60 686 aa22.08■■□□□ 1.13
PDLIM7-208ENST00000493815 ZNF541Q9H0D2 1346 aa22.08■■□□□ 1.12
PDLIM7-208ENST00000493815 A0A1B0GUL7 405 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 IGHDP01880 384 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 IFIT1P09914 478 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 SLC5A1P13866 664 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 ADORA1P30542 326 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 HSP90AB4PQ58FF6 505 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 RHPN1Q8TCX5 695 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 FAM84BQ96KN1 310 aaPredicted RBP22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 NEUROD6Q96NK8 337 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 DCTPP1Q9H773 170 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 ZNRF3Q9ULT6 936 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 FZD9O00144 591 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 NEFLP07196 543 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 BCAMP50895 628 aa22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 HDAC1Q13547 482 aaPredicted RBP22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 C15orf52Q6ZUT6 534 aaKnown RBP22.07■■□□□ 1.12
PDLIM7-208ENST00000493815 CHD4Q14839 1912 aa22.06■■□□□ 1.12
PDLIM7-208ENST00000493815 RAD17O75943 681 aa22.06■■□□□ 1.12
PDLIM7-208ENST00000493815 ERC1Q8IUD2 1116 aa22.06■■□□□ 1.12
PDLIM7-208ENST00000493815 AKAP2Q9Y2D5 859 aa22.06■■□□□ 1.12
PDLIM7-208ENST00000493815 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 SMARCA5O60264 1052 aaPredicted RBP22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 TNNI3KQ59H18 835 aa22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 CD209Q9NNX6 404 aa22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 IQSEC3Q9UPP2 1182 aaPredicted RBP22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 FPGT-TNNI3KV9GXZ4 949 aa22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 DICER1Q9UPY3 1922 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 ZNF609O15014 1411 aa22.05■■□□□ 1.12
PDLIM7-208ENST00000493815 HIBADHP31937 336 aaKnown RBP22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 ZNF804AQ7Z570 1209 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 KIF1BPQ96EK5 621 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 COA1Q9GZY4 146 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 RAB11FIP3O75154 756 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 CXCL9Q07325 125 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 CAVIN4Q5BKX8 364 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 VPS37DQ86XT2 251 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 ZNF526Q8TF50 670 aaPredicted RBP22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 EAF2Q96CJ1 260 aaPredicted RBP22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 XAGE2Q96GT9 111 aa22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 RWDD1Q9H446 243 aaPredicted RBP22.04■■□□□ 1.12
PDLIM7-208ENST00000493815 EIF6P56537 245 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-208ENST00000493815 FBXO33Q7Z6M2 555 aa22.03■■□□□ 1.12
PDLIM7-208ENST00000493815 CCDC8Q9H0W5 538 aaPredicted RBP22.03■■□□□ 1.12
PDLIM7-208ENST00000493815 TLR7Q9NYK1 1049 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-208ENST00000493815 JAG2Q9Y219 1238 aa22.03■■□□□ 1.12
PDLIM7-208ENST00000493815 DDNO94850 711 aaPredicted RBP22.02■■□□□ 1.12
PDLIM7-208ENST00000493815 YY1P25490 414 aa22.02■■□□□ 1.12
PDLIM7-208ENST00000493815 AACSQ86V21 672 aa22.02■■□□□ 1.12
PDLIM7-208ENST00000493815 FBXW7Q969H0 707 aa22.02■■□□□ 1.12
PDLIM7-208ENST00000493815 DBNDD2Q9BQY9 259 aa22.02■■□□□ 1.12
PDLIM7-208ENST00000493815 LRRCC1Q9C099 1032 aa22.02■■□□□ 1.12
PDLIM7-208ENST00000493815 GJA3Q9Y6H8 435 aa22.02■■□□□ 1.12
PDLIM7-208ENST00000493815 PHKA1P46020 1223 aa22.01■■□□□ 1.11
PDLIM7-208ENST00000493815 PODNQ7Z5L7 613 aa22.01■■□□□ 1.11
PDLIM7-208ENST00000493815 GPR108Q9NPR9 543 aa22.01■■□□□ 1.11
PDLIM7-208ENST00000493815 PSMD14O00487 310 aa22.01■■□□□ 1.11
PDLIM7-208ENST00000493815 ZC3H4Q9UPT8 1303 aaKnown RBP22■■□□□ 1.11
PDLIM7-208ENST00000493815 SCN9AQ15858 1988 aa22■■□□□ 1.11
PDLIM7-208ENST00000493815 IL1R1P14778 569 aa22■■□□□ 1.11
PDLIM7-208ENST00000493815 CCDC102BQ68D86 513 aa22■■□□□ 1.11
PDLIM7-208ENST00000493815 CIAPIN1Q6FI81 312 aa22■■□□□ 1.11
PDLIM7-208ENST00000493815 CLASRPQ8N2M8 674 aaKnown RBP22■■□□□ 1.11
PDLIM7-208ENST00000493815 MXD3Q9BW11 206 aa22■■□□□ 1.11
PDLIM7-208ENST00000493815 DBNLQ9UJU6 430 aaKnown RBP22■■□□□ 1.11
PDLIM7-208ENST00000493815 GLTPD2A6NH11 291 aa21.99■■□□□ 1.11
PDLIM7-208ENST00000493815 GTF2IP78347 998 aa21.99■■□□□ 1.11
PDLIM7-208ENST00000493815 GORABQ5T7V8 394 aa21.99■■□□□ 1.11
PDLIM7-208ENST00000493815 DPY19L2Q6NUT2 758 aa21.99■■□□□ 1.11
PDLIM7-208ENST00000493815 TDRD7Q8NHU6 1098 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-208ENST00000493815 ZBTB12Q9Y330 459 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-208ENST00000493815 FRAT2O75474 233 aaPredicted RBP21.98■■□□□ 1.11
PDLIM7-208ENST00000493815 B4GALNT3Q6L9W6 998 aa21.98■■□□□ 1.11
PDLIM7-208ENST00000493815 ANKRD45Q5TZF3 282 aa21.98■■□□□ 1.11
PDLIM7-208ENST00000493815 TTLL5Q6EMB2 1281 aa21.98■■□□□ 1.11
PDLIM7-208ENST00000493815 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
PDLIM7-208ENST00000493815 USP17L3A6NCW0 530 aa21.97■■□□□ 1.11
PDLIM7-208ENST00000493815 USP17L4A6NCW7 530 aa21.97■■□□□ 1.11
PDLIM7-208ENST00000493815 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-208ENST00000493815 TNIP1Q15025 636 aa21.97■■□□□ 1.11
PDLIM7-208ENST00000493815 USP17L1Q7RTZ2 530 aa21.97■■□□□ 1.11
PDLIM7-208ENST00000493815 GPC2Q8N158 579 aa21.97■■□□□ 1.11
PDLIM7-208ENST00000493815 IFIT2P09913 472 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-208ENST00000493815 ARAP2Q8WZ64 1704 aa21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 DACT2Q5SW24 774 aa21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 SMC5Q8IY18 1101 aa21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 VIL1P09327 827 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 GMPSP49915 693 aaPredicted RBP21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 STRIP1Q5VSL9 837 aa21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 PI16Q6UXB8 463 aa21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 GNL3LQ9NVN8 582 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-208ENST00000493815 COL1A1P02452 1464 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms