RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 BECN2A8MW95 431 aa16.49■□□□□ 0.23
ZIC4-215ENST00000493664 CSB-PGBD3P0DP91 1061 aa16.49■□□□□ 0.23
ZIC4-215ENST00000493664 ILDR1Q86SU0 546 aaPredicted RBP16.49■□□□□ 0.23
ZIC4-215ENST00000493664 LRRC8AQ8IWT6 810 aa16.49■□□□□ 0.23
ZIC4-215ENST00000493664 SLIT3O75094 1523 aa16.49■□□□□ 0.23
ZIC4-215ENST00000493664 E7EWF7 191 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 CYP27B1O15528 508 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
ZIC4-215ENST00000493664 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
ZIC4-215ENST00000493664 CASP7P55210 303 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 STX1AQ16623 288 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 ATG9AQ7Z3C6 839 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
ZIC4-215ENST00000493664 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 NAA16Q6N069 864 aaPredicted RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 MEGF6O75095 1541 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 SH3TC1Q8TE82 1336 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 FOXO4P98177 505 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 TRMT1Q9NXH9 659 aaKnown RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 TAOK2Q9UL54 1235 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 ZNF142P52746 1687 aaPredicted RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 A0A1B0GVL5 298 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 SMTNL1A8MU46 457 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 IGSF3O75054 1194 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
ZIC4-215ENST00000493664 HAND2P61296 217 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
ZIC4-215ENST00000493664 HMGB1P09429 215 aaKnown RBP16.46■□□□□ 0.23
ZIC4-215ENST00000493664 TTLL7Q6ZT98 887 aa16.46■□□□□ 0.23
ZIC4-215ENST00000493664 AOPEPQ8N6M6 819 aa16.46■□□□□ 0.23
ZIC4-215ENST00000493664 ENGASEQ8NFI3 743 aa16.46■□□□□ 0.23
ZIC4-215ENST00000493664 GJB4Q9NTQ9 266 aa16.46■□□□□ 0.23
ZIC4-215ENST00000493664 MAST3O60307 1309 aa16.46■□□□□ 0.23
ZIC4-215ENST00000493664 ADAMTS7Q9UKP4 1686 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 POLR3DP05423 398 aaPredicted RBP16.45■□□□□ 0.22
ZIC4-215ENST00000493664 SKILP12757 684 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 HSP90AB3PQ58FF7 597 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 CCDC112Q8NEF3 446 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 MYH15Q9Y2K3 1946 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 M0R2C6 588 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
ZIC4-215ENST00000493664 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 CEP135Q66GS9 1140 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 PUS3Q9BZE2 481 aaKnown RBP16.45■□□□□ 0.22
ZIC4-215ENST00000493664 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.45■□□□□ 0.22
ZIC4-215ENST00000493664 PCDHA7Q9UN72 937 aa16.45■□□□□ 0.22
ZIC4-215ENST00000493664 V9GYY5 206 aaPredicted RBP16.45■□□□□ 0.22
ZIC4-215ENST00000493664 CCDC69A6NI79 296 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
ZIC4-215ENST00000493664 FKBP4Q02790 459 aaKnown RBP eCLIP16.44■□□□□ 0.22
ZIC4-215ENST00000493664 DMTNQ08495 405 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
ZIC4-215ENST00000493664 SARM1Q6SZW1 724 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 SALL1Q9NSC2 1324 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 RFX7Q2KHR2 1363 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 CARMIL3Q8ND23 1372 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 CAVIN2O95810 425 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 HSPA2P54652 639 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 CABP4P57796 275 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 MRFAP1L1Q96HT8 127 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 SDF4Q9BRK5 362 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 DSCC1Q9BVC3 393 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 CTAGE5O15320 804 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 CDC25BP30305 580 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 ZNF396Q96N95 335 aaPredicted RBP16.44■□□□□ 0.22
ZIC4-215ENST00000493664 ZBTB3Q9H5J0 574 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 CAMTA1Q9Y6Y1 1673 aa16.44■□□□□ 0.22
ZIC4-215ENST00000493664 A0A1B0GUL7 405 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 IPO4Q8TEX9 1081 aaKnown RBP16.43■□□□□ 0.22
ZIC4-215ENST00000493664 OSBP2Q969R2 916 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
ZIC4-215ENST00000493664 AGXT2Q9BYV1 514 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 PALLDQ8WX93 1383 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 NDUFA8P51970 172 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 CLIC4Q9Y696 253 aa16.43■□□□□ 0.22
ZIC4-215ENST00000493664 BIN1O00499 593 aa16.42■□□□□ 0.22
ZIC4-215ENST00000493664 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
ZIC4-215ENST00000493664 H7C1W4 665 aa16.42■□□□□ 0.22
ZIC4-215ENST00000493664 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
ZIC4-215ENST00000493664 CCZ1BP86790 482 aa16.42■□□□□ 0.22
ZIC4-215ENST00000493664 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms