RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 ATP2B4P23634 1241 aa21.64■■□□□ 1.05
NECAB3-214ENST00000493590 CCDC152Q4G0S7 254 aa21.64■■□□□ 1.05
NECAB3-214ENST00000493590 ERO1AQ96HE7 468 aa21.64■■□□□ 1.05
NECAB3-214ENST00000493590 BRCA2P51587 3418 aa21.64■■□□□ 1.05
NECAB3-214ENST00000493590 WTIPA6NIX2 430 aaPredicted RBP21.63■■□□□ 1.05
NECAB3-214ENST00000493590 IGF2BP3O00425 579 aaKnown RBP eCLIP21.63■■□□□ 1.05
NECAB3-214ENST00000493590 DACT2Q5SW24 774 aa21.63■■□□□ 1.05
NECAB3-214ENST00000493590 LDLRAD1Q5T700 205 aa21.63■■□□□ 1.05
NECAB3-214ENST00000493590 ANKRD18AQ8IVF6 992 aa21.63■■□□□ 1.05
NECAB3-214ENST00000493590 ZBTB38Q8NAP3 1195 aaPredicted RBP21.63■■□□□ 1.05
NECAB3-214ENST00000493590 JARID2Q92833 1246 aaPredicted RBP21.63■■□□□ 1.05
NECAB3-214ENST00000493590 SLC10A4Q96EP9 437 aa21.63■■□□□ 1.05
NECAB3-214ENST00000493590 APOBEC3FQ8IUX4 373 aaKnown RBP21.62■■□□□ 1.05
NECAB3-214ENST00000493590 TMEM106CQ9BVX2 250 aa21.62■■□□□ 1.05
NECAB3-214ENST00000493590 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
NECAB3-214ENST00000493590 ZNF646O15015 1829 aaPredicted RBP21.62■■□□□ 1.05
NECAB3-214ENST00000493590 SPEF2Q9C093 1822 aa21.62■■□□□ 1.05
NECAB3-214ENST00000493590 INHBEP58166 350 aa21.61■■□□□ 1.05
NECAB3-214ENST00000493590 LMOD3Q0VAK6 560 aa21.61■■□□□ 1.05
NECAB3-214ENST00000493590 RIC3Q7Z5B4 369 aa21.61■■□□□ 1.05
NECAB3-214ENST00000493590 ARMC5Q96C12 935 aa21.61■■□□□ 1.05
NECAB3-214ENST00000493590 CLMNQ96JQ2 1002 aa21.61■■□□□ 1.05
NECAB3-214ENST00000493590 EFCC1Q9HA90 598 aa21.61■■□□□ 1.05
NECAB3-214ENST00000493590 HSP90B1P14625 803 aaKnown RBP21.6■■□□□ 1.05
NECAB3-214ENST00000493590 NEUROD2Q15784 382 aa21.6■■□□□ 1.05
NECAB3-214ENST00000493590 WNK4Q96J92 1243 aa21.6■■□□□ 1.05
NECAB3-214ENST00000493590 MYO3BQ8WXR4 1341 aa21.59■■□□□ 1.05
NECAB3-214ENST00000493590 MYCP01106 439 aaPredicted RBP21.59■■□□□ 1.05
NECAB3-214ENST00000493590 TRIM28Q13263 835 aaKnown RBP21.59■■□□□ 1.05
NECAB3-214ENST00000493590 CRHR2Q13324 411 aa21.59■■□□□ 1.05
NECAB3-214ENST00000493590 KIAA0825Q8IV33 1275 aa21.59■■□□□ 1.05
NECAB3-214ENST00000493590 MYD88Q99836 296 aa21.59■■□□□ 1.05
NECAB3-214ENST00000493590 HYPKQ9NX55 129 aa21.59■■□□□ 1.05
NECAB3-214ENST00000493590 MED23Q9ULK4 1368 aa21.59■■□□□ 1.05
NECAB3-214ENST00000493590 PDE8AO60658 829 aa21.58■■□□□ 1.05
NECAB3-214ENST00000493590 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.05
NECAB3-214ENST00000493590 GOLGA2Q08379 1002 aa21.58■■□□□ 1.05
NECAB3-214ENST00000493590 ZBTB48P10074 688 aaPredicted RBP21.57■■□□□ 1.04
NECAB3-214ENST00000493590 SLC4A8Q2Y0W8 1093 aa21.57■■□□□ 1.04
NECAB3-214ENST00000493590 STRIP1Q5VSL9 837 aa21.57■■□□□ 1.04
NECAB3-214ENST00000493590 H0YGN5 161 aa21.56■■□□□ 1.04
NECAB3-214ENST00000493590 CHL1O00533 1208 aa21.56■■□□□ 1.04
NECAB3-214ENST00000493590 SP3Q02447 781 aa21.56■■□□□ 1.04
NECAB3-214ENST00000493590 OTUD7BQ6GQQ9 843 aa21.56■■□□□ 1.04
NECAB3-214ENST00000493590 DEFB129Q9H1M3 183 aa21.56■■□□□ 1.04
NECAB3-214ENST00000493590 TRIOBPQ9H2D6 2365 aa21.55■■□□□ 1.04
NECAB3-214ENST00000493590 CAP1Q01518 475 aa21.55■■□□□ 1.04
NECAB3-214ENST00000493590 ZNF333Q96JL9 665 aa21.55■■□□□ 1.04
NECAB3-214ENST00000493590 LAMB1P07942 1786 aa21.55■■□□□ 1.04
NECAB3-214ENST00000493590 SSC5DA1L4H1 1573 aa21.54■■□□□ 1.04
NECAB3-214ENST00000493590 PPP1R12BO60237 982 aaPredicted RBP21.54■■□□□ 1.04
NECAB3-214ENST00000493590 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
NECAB3-214ENST00000493590 SLC9C1Q4G0N8 1177 aa21.54■■□□□ 1.04
NECAB3-214ENST00000493590 CDC5LQ99459 802 aaKnown RBP21.54■■□□□ 1.04
NECAB3-214ENST00000493590 COA1Q9GZY4 146 aa21.54■■□□□ 1.04
NECAB3-214ENST00000493590 COL1A1P02452 1464 aaPredicted RBP21.53■■□□□ 1.04
NECAB3-214ENST00000493590 DLL1O00548 723 aa21.53■■□□□ 1.04
NECAB3-214ENST00000493590 HOXB7P09629 217 aa21.53■■□□□ 1.04
NECAB3-214ENST00000493590 CCT4P50991 539 aaKnown RBP21.53■■□□□ 1.04
NECAB3-214ENST00000493590 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
NECAB3-214ENST00000493590 CHRDL2Q6WN34 429 aa21.53■■□□□ 1.04
NECAB3-214ENST00000493590 TXNRD3Q86VQ6 643 aa21.53■■□□□ 1.04
NECAB3-214ENST00000493590 CWC25Q9NXE8 425 aaPredicted RBP21.53■■□□□ 1.04
NECAB3-214ENST00000493590 MINPP1Q9UNW1 487 aa21.53■■□□□ 1.04
NECAB3-214ENST00000493590 PTCH2Q9Y6C5 1203 aa21.53■■□□□ 1.04
NECAB3-214ENST00000493590 MAP3K11Q16584 847 aa21.52■■□□□ 1.04
NECAB3-214ENST00000493590 DUSP27Q5VZP5 1158 aa21.52■■□□□ 1.04
NECAB3-214ENST00000493590 NBPF11Q86T75 865 aa21.52■■□□□ 1.04
NECAB3-214ENST00000493590 CCDC146Q8IYE0 955 aa21.52■■□□□ 1.04
NECAB3-214ENST00000493590 CCDC191Q8NCU4 936 aa21.52■■□□□ 1.04
NECAB3-214ENST00000493590 PHAXQ9H814 394 aaKnown RBP21.52■■□□□ 1.04
NECAB3-214ENST00000493590 SZT2Q5T011 3432 aa21.51■■□□□ 1.03
NECAB3-214ENST00000493590 CEP290O15078 2479 aa21.51■■□□□ 1.03
NECAB3-214ENST00000493590 GJA5P36382 358 aa21.51■■□□□ 1.03
NECAB3-214ENST00000493590 GTF2IP78347 998 aa21.51■■□□□ 1.03
NECAB3-214ENST00000493590 DLGAP5Q15398 846 aa21.51■■□□□ 1.03
NECAB3-214ENST00000493590 OTUD5Q96G74 571 aa21.51■■□□□ 1.03
NECAB3-214ENST00000493590 KLRK1P26718 216 aa21.5■■□□□ 1.03
NECAB3-214ENST00000493590 CTSWP56202 376 aa21.5■■□□□ 1.03
NECAB3-214ENST00000493590 ZBED3Q96IU2 234 aaPredicted RBP21.5■■□□□ 1.03
NECAB3-214ENST00000493590 PTPN18Q99952 460 aa21.5■■□□□ 1.03
NECAB3-214ENST00000493590 BSDC1Q9NW68 430 aaPredicted RBP21.5■■□□□ 1.03
NECAB3-214ENST00000493590 CLRN2A0PK11 232 aa21.49■■□□□ 1.03
NECAB3-214ENST00000493590 IREB2P48200 963 aaKnown RBP21.49■■□□□ 1.03
NECAB3-214ENST00000493590 MMP14P50281 582 aa21.49■■□□□ 1.03
NECAB3-214ENST00000493590 SLC17A8Q8NDX2 589 aa21.49■■□□□ 1.03
NECAB3-214ENST00000493590 GREM2Q9H772 168 aa21.49■■□□□ 1.03
NECAB3-214ENST00000493590 PCDHAC2Q9Y5I4 1007 aa21.49■■□□□ 1.03
NECAB3-214ENST00000493590 ECM29Q5VYK3 1845 aa21.48■■□□□ 1.03
NECAB3-214ENST00000493590 SUPT20HL1Q3ZLR7 823 aa21.48■■□□□ 1.03
NECAB3-214ENST00000493590 VEZTQ9HBM0 779 aa21.48■■□□□ 1.03
NECAB3-214ENST00000493590 MYH3P11055 1940 aa21.47■■□□□ 1.03
NECAB3-214ENST00000493590 F8W031 263 aaPredicted RBP21.47■■□□□ 1.03
NECAB3-214ENST00000493590 NBPF12Q5TAG4 269 aaPredicted RBP21.47■■□□□ 1.03
NECAB3-214ENST00000493590 SH3TC2Q8TF17 1288 aa21.47■■□□□ 1.03
NECAB3-214ENST00000493590 ELP3Q9H9T3 547 aa21.47■■□□□ 1.03
NECAB3-214ENST00000493590 PPP2R3BQ9Y5P8 575 aa21.47■■□□□ 1.03
NECAB3-214ENST00000493590 ARHGEF6Q15052 776 aa21.46■■□□□ 1.03
NECAB3-214ENST00000493590 DPF3Q92784 378 aa21.46■■□□□ 1.03
NECAB3-214ENST00000493590 RBM27Q9P2N5 1060 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms