RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-210ENST00000493582 NOM1Q5C9Z4 860 aaKnown RBP13.55□□□□□ -0.24
HDAC4-210ENST00000493582 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-210ENST00000493582 IQUBQ8NA54 791 aa13.55□□□□□ -0.24
HDAC4-210ENST00000493582 MRPS27Q92552 414 aaKnown RBP13.55□□□□□ -0.24
HDAC4-210ENST00000493582 EDC3Q96F86 508 aaKnown RBP13.55□□□□□ -0.24
HDAC4-210ENST00000493582 NEK1Q96PY6 1258 aa13.55□□□□□ -0.24
HDAC4-210ENST00000493582 SLC26A8Q96RN1 970 aa13.55□□□□□ -0.24
HDAC4-210ENST00000493582 NUTM2FA1L443 756 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 EIF3CLB5ME19 914 aaKnown RBP13.54□□□□□ -0.24
HDAC4-210ENST00000493582 ANXA1P04083 346 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 GUCY2CP25092 1073 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 CCT2P78371 535 aaKnown RBP13.54□□□□□ -0.24
HDAC4-210ENST00000493582 PSME1Q06323 249 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 EIF3CQ99613 913 aaKnown RBP13.54□□□□□ -0.24
HDAC4-210ENST00000493582 PPP2R2CQ9Y2T4 447 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 MAGEA9P43362 315 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 GPATCH11Q8N954 259 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 MPHOSPH8Q99549 860 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 SUGCTQ9HAC7 445 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 TLR7Q9NYK1 1049 aaKnown RBP13.54□□□□□ -0.24
HDAC4-210ENST00000493582 MRFAP1Q9Y605 127 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 ALKQ9UM73 1620 aa13.54□□□□□ -0.24
HDAC4-210ENST00000493582 UBASH3AP57075 661 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 CFAP100Q494V2 611 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 ILDR1Q86SU0 546 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-210ENST00000493582 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 DHX58Q96C10 678 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-210ENST00000493582 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-210ENST00000493582 PLEKHA4Q9H4M7 779 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 TMEM232C9JQI7 657 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 MAP2K7O14733 419 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 SERPINC1P01008 464 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 CHGBP05060 677 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 APOBRQ0VD83 1088 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 E2F4Q16254 413 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 SKIDA1Q1XH10 827 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 HSD3B7Q9H2F3 369 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 ZSCAN12O43309 604 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 PHACTR2O75167 634 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 IVLP07476 585 aa13.53□□□□□ -0.24
HDAC4-210ENST00000493582 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
HDAC4-210ENST00000493582 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
HDAC4-210ENST00000493582 NCOA5Q9HCD5 579 aaKnown RBP13.53□□□□□ -0.24
HDAC4-210ENST00000493582 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.24
HDAC4-210ENST00000493582 HIP1O00291 1037 aa13.52□□□□□ -0.24
HDAC4-210ENST00000493582 TAF5LO75529 589 aa13.52□□□□□ -0.24
HDAC4-210ENST00000493582 TXLNAP40222 546 aa13.52□□□□□ -0.24
HDAC4-210ENST00000493582 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.24
HDAC4-210ENST00000493582 BPIFA3Q9BQP9 254 aa13.52□□□□□ -0.24
HDAC4-210ENST00000493582 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.24
HDAC4-210ENST00000493582 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.24
HDAC4-210ENST00000493582 CCDC151A5D8V7 595 aa13.52□□□□□ -0.25
HDAC4-210ENST00000493582 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
HDAC4-210ENST00000493582 HSP90AA4PQ58FG1 418 aa13.52□□□□□ -0.25
HDAC4-210ENST00000493582 NAA16Q6N069 864 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-210ENST00000493582 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
HDAC4-210ENST00000493582 ADALQ6DHV7 355 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 DNAAF4Q8WXU2 420 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 GOLGA1Q92805 767 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 NCAPGQ9BPX3 1015 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 NEDD4P46934 1319 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 NLRP12P59046 1061 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 OTUD7BQ6GQQ9 843 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
HDAC4-210ENST00000493582 CRYBG1Q9Y4K1 1723 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 RAPGEF3O95398 923 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 POLR3DP05423 398 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-210ENST00000493582 TOP1P11387 765 aaKnown RBP13.51□□□□□ -0.25
HDAC4-210ENST00000493582 CCDC129Q6ZRS4 1044 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 TOGARAM2Q6ZUX3 1019 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 TMEM139Q8IV31 216 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 PDILTQ8N807 584 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 MYCBPQ99417 103 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-210ENST00000493582 EYA1Q99502 592 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 NDUFB9Q9Y6M9 179 aa13.51□□□□□ -0.25
HDAC4-210ENST00000493582 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
HDAC4-210ENST00000493582 RIMS1Q86UR5 1692 aaKnown RBP13.5□□□□□ -0.25
HDAC4-210ENST00000493582 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 SASH1O94885 1247 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 DHX8Q14562 1220 aaKnown RBP13.5□□□□□ -0.25
HDAC4-210ENST00000493582 KARSQ15046 597 aaKnown RBP13.5□□□□□ -0.25
HDAC4-210ENST00000493582 BEND6Q5SZJ8 279 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-210ENST00000493582 DESI2Q9BSY9 194 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 SNRKQ9NRH2 765 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 ZNF202O95125 648 aa13.5□□□□□ -0.25
HDAC4-210ENST00000493582 KIFC2Q96AC6 838 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms