RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
PRPF3-206ENST00000493553 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
PRPF3-206ENST00000493553 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 ZNF790Q6PG37 636 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 G2E3Q7L622 706 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 DNAAF4Q8WXU2 420 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRPF3-206ENST00000493553 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 COL18A1P39060 1754 aa12.38□□□□□ -0.43
PRPF3-206ENST00000493553 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
PRPF3-206ENST00000493553 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
PRPF3-206ENST00000493553 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
PRPF3-206ENST00000493553 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
PRPF3-206ENST00000493553 PDXDC2PQ6P474 469 aa12.37□□□□□ -0.43
PRPF3-206ENST00000493553 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
PRPF3-206ENST00000493553 TOM1L2Q6ZVM7 507 aa12.37□□□□□ -0.43
PRPF3-206ENST00000493553 SKAP1Q86WV1 359 aa12.37□□□□□ -0.43
PRPF3-206ENST00000493553 ZCRB1Q8TBF4 217 aaKnown RBP12.37□□□□□ -0.43
PRPF3-206ENST00000493553 MEIS3Q99687 375 aa12.37□□□□□ -0.43
PRPF3-206ENST00000493553 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
PRPF3-206ENST00000493553 POTECB2RU33 542 aa12.36□□□□□ -0.43
PRPF3-206ENST00000493553 ADH1CP00326 375 aa12.36□□□□□ -0.43
PRPF3-206ENST00000493553 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
PRPF3-206ENST00000493553 CABP4P57796 275 aa12.36□□□□□ -0.43
PRPF3-206ENST00000493553 EVA1CP58658 441 aa12.36□□□□□ -0.43
PRPF3-206ENST00000493553 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
PRPF3-206ENST00000493553 FMNL2Q96PY5 1086 aa12.36□□□□□ -0.43
PRPF3-206ENST00000493553 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
PRPF3-206ENST00000493553 MRC1P22897 1456 aa12.35□□□□□ -0.43
PRPF3-206ENST00000493553 XIRP1Q702N8 1843 aaKnown RBP12.35□□□□□ -0.43
PRPF3-206ENST00000493553 F6X3S4 739 aa12.35□□□□□ -0.43
PRPF3-206ENST00000493553 IL2RBP14784 551 aa12.35□□□□□ -0.43
PRPF3-206ENST00000493553 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
PRPF3-206ENST00000493553 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
PRPF3-206ENST00000493553 LARP1Q6PKG0 1096 aaKnown RBP12.35□□□□□ -0.43
PRPF3-206ENST00000493553 TRMT44Q8IYL2 757 aaKnown RBP12.35□□□□□ -0.43
PRPF3-206ENST00000493553 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
PRPF3-206ENST00000493553 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
PRPF3-206ENST00000493553 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
PRPF3-206ENST00000493553 CDC45O75419 566 aa12.34□□□□□ -0.43
PRPF3-206ENST00000493553 NNTQ13423 1086 aa12.34□□□□□ -0.43
PRPF3-206ENST00000493553 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
PRPF3-206ENST00000493553 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
PRPF3-206ENST00000493553 OSBPL3Q9H4L5 887 aa12.34□□□□□ -0.43
PRPF3-206ENST00000493553 ATP13A2Q9NQ11 1180 aa12.34□□□□□ -0.43
PRPF3-206ENST00000493553 CRYBG1Q9Y4K1 1723 aa12.34□□□□□ -0.43
PRPF3-206ENST00000493553 MEGF6O75095 1541 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 PI4KAP2A4QPH2 592 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 BEND3Q5T5X7 828 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 PI4KAP1Q8N8J0 262 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 CDCA7Q9BWT1 371 aaPredicted RBP12.33□□□□□ -0.44
PRPF3-206ENST00000493553 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 MAP4K5Q9Y4K4 846 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 AOX1Q06278 1338 aa12.33□□□□□ -0.44
PRPF3-206ENST00000493553 COL5A2P05997 1499 aaPredicted RBP12.33□□□□□ -0.44
PRPF3-206ENST00000493553 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
PRPF3-206ENST00000493553 CYP27B1O15528 508 aa12.32□□□□□ -0.44
PRPF3-206ENST00000493553 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
PRPF3-206ENST00000493553 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
PRPF3-206ENST00000493553 NFATC2IPQ8NCF5 419 aa12.32□□□□□ -0.44
PRPF3-206ENST00000493553 SSH3Q8TE77 659 aa12.32□□□□□ -0.44
PRPF3-206ENST00000493553 TEX13AQ9BXU3 409 aaPredicted RBP12.32□□□□□ -0.44
PRPF3-206ENST00000493553 USP35Q9P2H5 1018 aa12.32□□□□□ -0.44
PRPF3-206ENST00000493553 GPSM3Q9Y4H4 160 aa12.32□□□□□ -0.44
PRPF3-206ENST00000493553 RGPD2P0DJD1 1756 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
PRPF3-206ENST00000493553 NHSL1Q5SYE7 1610 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 MAGEB6P1A0A0J9YX57 407 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 NR5A1Q13285 461 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 MTX1Q13505 466 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 EPS8L1Q8TE68 723 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 PHAXQ9H814 394 aaKnown RBP12.31□□□□□ -0.44
PRPF3-206ENST00000493553 C9orf78Q9NZ63 289 aaPredicted RBP12.31□□□□□ -0.44
PRPF3-206ENST00000493553 GMPR2Q9P2T1 348 aaKnown RBP12.31□□□□□ -0.44
PRPF3-206ENST00000493553 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
PRPF3-206ENST00000493553 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
PRPF3-206ENST00000493553 CAPN5O15484 640 aaPredicted RBP12.3□□□□□ -0.44
PRPF3-206ENST00000493553 KCNQ3O43525 872 aa12.3□□□□□ -0.44
PRPF3-206ENST00000493553 GRM5P41594 1212 aa12.3□□□□□ -0.44
PRPF3-206ENST00000493553 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
PRPF3-206ENST00000493553 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
PRPF3-206ENST00000493553 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
PRPF3-206ENST00000493553 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
PRPF3-206ENST00000493553 PARP4Q9UKK3 1724 aaKnown RBP12.3□□□□□ -0.44
PRPF3-206ENST00000493553 RBM25P49756 843 aaKnown RBP12.29□□□□□ -0.44
PRPF3-206ENST00000493553 PTK2Q05397 1052 aa12.29□□□□□ -0.44
PRPF3-206ENST00000493553 KIF1BPQ96EK5 621 aa12.29□□□□□ -0.44
PRPF3-206ENST00000493553 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
PRPF3-206ENST00000493553 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
PRPF3-206ENST00000493553 UTYO14607 1347 aa12.29□□□□□ -0.44
PRPF3-206ENST00000493553 AHDC1Q5TGY3 1603 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms