RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 ZNF521Q96K83 1311 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 F8W031 263 aaPredicted RBP7.41□□□□□ -1.22
NF1-215ENST00000493220 MCMDC2Q4G0Z9 681 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 HELLSQ9NRZ9 838 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 MFSD6Q6ZSS7 791 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 NUP133Q8WUM0 1156 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
NF1-215ENST00000493220 SNRKQ9NRH2 765 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 SRP68Q9UHB9 627 aaKnown RBP7.41□□□□□ -1.22
NF1-215ENST00000493220 NUCB2P80303 420 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 UBE4AQ14139 1066 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 HELBQ8NG08 1087 aaPredicted RBP7.41□□□□□ -1.22
NF1-215ENST00000493220 VEZTQ9HBM0 779 aa7.41□□□□□ -1.22
NF1-215ENST00000493220 PDE1AP54750 535 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 PROSER3Q2NL68 480 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 SLC9C2Q5TAH2 1124 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 JAKMIP1Q96N16 626 aaKnown RBP7.4□□□□□ -1.22
NF1-215ENST00000493220 PRDM10Q9NQV6 1147 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 TOPAZ1Q8N9V7 1692 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 TTC6Q86TZ1 520 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 STK11IPQ8N1F8 1099 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 FEZ1Q99689 392 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 SH2D4AQ9H788 454 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 GPR108Q9NPR9 543 aa7.4□□□□□ -1.22
NF1-215ENST00000493220 KIF5BP33176 963 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 CATIPQ7Z7H3 387 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 MAGEB6Q8N7X4 407 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 CEMIPQ8WUJ3 1361 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 DDX11L8A8MPP1 907 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 RGL2O15211 777 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 RANBP6O60518 1105 aaKnown RBP7.4□□□□□ -1.23
NF1-215ENST00000493220 NEK4P51957 841 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 TNFAIP1Q13829 316 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 LINC00116Q8NCU8 138 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 FOXD4L1Q9NU39 408 aa7.4□□□□□ -1.23
NF1-215ENST00000493220 SLC15A2Q16348 729 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 NCOA7Q8NI08 942 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 CTCFLQ8NI51 663 aaPredicted RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 NOL7Q9UMY1 257 aaKnown RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 COL3A1P02461 1466 aaPredicted RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 FAM208AQ9UK61 1670 aaKnown RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 PRAMEF22A3QJZ6 481 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 IGSF3O75054 1194 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 NBPF7P0C2Y1 421 aaPredicted RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 SPATA5Q8NB90 893 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 CUL5Q93034 780 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 KAT14Q9H8E8 782 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 ZNF804BA4D1E1 1349 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 RLBP1P12271 317 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 CHRNDQ07001 517 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 CCDC96Q2M329 555 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 PARP4Q9UKK3 1724 aaKnown RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 TSPY3P0CV98 308 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 TSPY8P0CW00 308 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 SUSD4Q5VX71 490 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 TMTC2Q8N394 836 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 ZNF396Q96N95 335 aaPredicted RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 MAP2P11137 1827 aaKnown RBP7.39□□□□□ -1.23
NF1-215ENST00000493220 PIK3C2AO00443 1686 aa7.39□□□□□ -1.23
NF1-215ENST00000493220 TSPY2A6NKD2 308 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 KCNQ4P56696 695 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 PICALMQ13492 652 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 EZH2Q15910 746 aaKnown RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 TBC1D9BQ66K14 1250 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 PRPF40BQ6NWY9 871 aaKnown RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 BSDC1Q9NW68 430 aaPredicted RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 SLC12A7Q9Y666 1083 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 PXDNLA1KZ92 1463 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 RBM26Q5T8P6 1007 aaKnown RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 CCDC12Q8WUD4 166 aaPredicted RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 ESR2Q92731 530 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 IQSEC3Q9UPP2 1182 aaPredicted RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 RBM10P98175 930 aaKnown RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 DLGAP5Q15398 846 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 TMED8Q6PL24 325 aaPredicted RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 BRIP1Q9BX63 1249 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 TICAM2Q86XR7 235 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 SSH3Q8TE77 659 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 USP44Q9H0E7 712 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 GREM2Q9H772 168 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 NFAT5O94916 1531 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 H7C1W4 665 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 GRIN3BO60391 1043 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 TAF5LO75529 589 aa7.38□□□□□ -1.23
NF1-215ENST00000493220 CASTP20810 708 aaKnown RBP7.38□□□□□ -1.23
NF1-215ENST00000493220 IGHDP01880 384 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 TPM2P07951 284 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 TEX11Q8IYF3 940 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 TEKT1Q969V4 418 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 COPRSQ9NQ92 184 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 PCDHB15Q9Y5E8 787 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 VPS37CA5D8V6 355 aaPredicted RBP7.37□□□□□ -1.23
NF1-215ENST00000493220 ZBTB7AO95365 584 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 SLC4A3P48751 1232 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 R3HDM1Q15032 1099 aaKnown RBP7.37□□□□□ -1.23
NF1-215ENST00000493220 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
NF1-215ENST00000493220 SH2B1Q9NRF2 756 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms