RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 CDCA7LQ96GN5 454 aa14.53□□□□□ -0.08
LRTM1-202ENST00000493075 CACNA1FO60840 1977 aa14.53□□□□□ -0.08
LRTM1-202ENST00000493075 CELF2O95319 508 aaKnown RBP14.52□□□□□ -0.08
LRTM1-202ENST00000493075 USP17L8P0C7I0 530 aa14.52□□□□□ -0.08
LRTM1-202ENST00000493075 KIF4BQ2VIQ3 1234 aa14.52□□□□□ -0.08
LRTM1-202ENST00000493075 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.08
LRTM1-202ENST00000493075 USP48Q86UV5 1035 aa14.52□□□□□ -0.08
LRTM1-202ENST00000493075 TXNRD3Q86VQ6 643 aa14.52□□□□□ -0.08
LRTM1-202ENST00000493075 DCPSQ96C86 337 aaKnown RBP14.52□□□□□ -0.08
LRTM1-202ENST00000493075 HHIPL1Q96JK4 782 aa14.52□□□□□ -0.08
LRTM1-202ENST00000493075 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.08
LRTM1-202ENST00000493075 CHMP3Q9Y3E7 222 aa14.52□□□□□ -0.08
LRTM1-202ENST00000493075 EGFRP00533 1210 aa14.51□□□□□ -0.09
LRTM1-202ENST00000493075 NBPF7P0C2Y1 421 aaPredicted RBP14.51□□□□□ -0.09
LRTM1-202ENST00000493075 ECE1P42892 770 aa14.51□□□□□ -0.09
LRTM1-202ENST00000493075 KCNJ4P48050 445 aa14.51□□□□□ -0.09
LRTM1-202ENST00000493075 DACT2Q5SW24 774 aa14.51□□□□□ -0.09
LRTM1-202ENST00000493075 LDHAL6AQ6ZMR3 332 aa14.51□□□□□ -0.09
LRTM1-202ENST00000493075 MYO3BQ8WXR4 1341 aa14.51□□□□□ -0.09
LRTM1-202ENST00000493075 WDR33Q9C0J8 1336 aaKnown RBP14.51□□□□□ -0.09
LRTM1-202ENST00000493075 BRPF1P55201 1214 aaPredicted RBP14.5□□□□□ -0.09
LRTM1-202ENST00000493075 KRT26Q7Z3Y9 468 aa14.5□□□□□ -0.09
LRTM1-202ENST00000493075 SAPCD2Q86UD0 394 aa14.5□□□□□ -0.09
LRTM1-202ENST00000493075 KAZALD1Q96I82 304 aa14.5□□□□□ -0.09
LRTM1-202ENST00000493075 SUCLG2Q96I99 432 aa14.5□□□□□ -0.09
LRTM1-202ENST00000493075 WBP1LQ9NX94 342 aa14.5□□□□□ -0.09
LRTM1-202ENST00000493075 MAP2K1Q02750 393 aaPredicted RBP14.49□□□□□ -0.09
LRTM1-202ENST00000493075 RABL6Q3YEC7 729 aaPredicted RBP14.49□□□□□ -0.09
LRTM1-202ENST00000493075 TAF7LQ5H9L4 462 aa14.49□□□□□ -0.09
LRTM1-202ENST00000493075 TTLL5Q6EMB2 1281 aa14.49□□□□□ -0.09
LRTM1-202ENST00000493075 CD209Q9NNX6 404 aa14.49□□□□□ -0.09
LRTM1-202ENST00000493075 MYOZ2Q9NPC6 264 aa14.49□□□□□ -0.09
LRTM1-202ENST00000493075 IRS2Q9Y4H2 1338 aa14.49□□□□□ -0.09
LRTM1-202ENST00000493075 TAF5LO75529 589 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 KLRK1P26718 216 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 SCARF1Q14162 830 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 COL13A1Q5TAT6 717 aaPredicted RBP14.48□□□□□ -0.09
LRTM1-202ENST00000493075 SULF1Q8IWU6 871 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 OGFOD1Q8N543 542 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 HELBQ8NG08 1087 aaPredicted RBP14.48□□□□□ -0.09
LRTM1-202ENST00000493075 ZNF594Q96JF6 807 aaPredicted RBP14.48□□□□□ -0.09
LRTM1-202ENST00000493075 CAPNS2Q96L46 248 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 USP44Q9H0E7 712 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 CNNM1Q9NRU3 951 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 SMC4Q9NTJ3 1288 aa14.48□□□□□ -0.09
LRTM1-202ENST00000493075 PITPNM2Q9BZ72 1349 aa14.47□□□□□ -0.09
LRTM1-202ENST00000493075 MAP2K2P36507 400 aa14.47□□□□□ -0.09
LRTM1-202ENST00000493075 AIDAQ96BJ3 306 aa14.47□□□□□ -0.09
LRTM1-202ENST00000493075 GGA3Q9NZ52 723 aa14.47□□□□□ -0.09
LRTM1-202ENST00000493075 SNAP23O00161 211 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 IL1R1P14778 569 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 GTF2IP78347 998 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 UBE4AQ14139 1066 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 CYP4F22Q6NT55 531 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 ZNF804AQ7Z570 1209 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 BICC1Q9H694 974 aaKnown RBP14.46□□□□□ -0.09
LRTM1-202ENST00000493075 ZNF408Q9H9D4 720 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 RIPOR2Q9Y4F9 1068 aa14.46□□□□□ -0.09
LRTM1-202ENST00000493075 MYH3P11055 1940 aa14.46□□□□□ -0.1
LRTM1-202ENST00000493075 PCNTO95613 3336 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 ADM5C9JUS6 153 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 FOXN1O15353 648 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 CTCFP49711 727 aaPredicted RBP14.45□□□□□ -0.1
LRTM1-202ENST00000493075 FKBP1AP62942 108 aaKnown RBP14.45□□□□□ -0.1
LRTM1-202ENST00000493075 ANGEL2Q5VTE6 544 aaKnown RBP14.45□□□□□ -0.1
LRTM1-202ENST00000493075 PAXIP1Q6ZW49 1069 aaPredicted RBP14.45□□□□□ -0.1
LRTM1-202ENST00000493075 ANKRD44Q8N8A2 993 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 C2orf69Q8N8R5 385 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 FBXW7Q969H0 707 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 MXD3Q9BW11 206 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 GBA2Q9HCG7 927 aaPredicted RBP14.45□□□□□ -0.1
LRTM1-202ENST00000493075 PRDM10Q9NQV6 1147 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 HDAC9Q9UKV0 1011 aa14.45□□□□□ -0.1
LRTM1-202ENST00000493075 ASTN2O75129 1339 aaPredicted RBP14.44□□□□□ -0.1
LRTM1-202ENST00000493075 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
LRTM1-202ENST00000493075 PLIN1O60240 522 aa14.44□□□□□ -0.1
LRTM1-202ENST00000493075 DLK2Q6UY11 383 aa14.44□□□□□ -0.1
LRTM1-202ENST00000493075 API5Q9BZZ5 524 aaKnown RBP14.44□□□□□ -0.1
LRTM1-202ENST00000493075 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
LRTM1-202ENST00000493075 SCN9AQ15858 1988 aa14.44□□□□□ -0.1
LRTM1-202ENST00000493075 WNT10BO00744 389 aa14.43□□□□□ -0.1
LRTM1-202ENST00000493075 SASH1O94885 1247 aa14.43□□□□□ -0.1
LRTM1-202ENST00000493075 RARSP54136 660 aaKnown RBP14.43□□□□□ -0.1
LRTM1-202ENST00000493075 HUNKP57058 714 aa14.43□□□□□ -0.1
LRTM1-202ENST00000493075 NBPF9Q3BBW0 867 aa14.43□□□□□ -0.1
LRTM1-202ENST00000493075 ARHGAP45Q92619 1136 aa14.43□□□□□ -0.1
LRTM1-202ENST00000493075 ZBED3Q96IU2 234 aaPredicted RBP14.43□□□□□ -0.1
LRTM1-202ENST00000493075 PUS3Q9BZE2 481 aaKnown RBP14.43□□□□□ -0.1
LRTM1-202ENST00000493075 HDAC5Q9UQL6 1122 aa14.43□□□□□ -0.1
LRTM1-202ENST00000493075 FKBP1BP68106 108 aa14.42□□□□□ -0.1
LRTM1-202ENST00000493075 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
LRTM1-202ENST00000493075 KIAA0825Q8IV33 1275 aa14.42□□□□□ -0.1
LRTM1-202ENST00000493075 MTMR14Q8NCE2 650 aa14.42□□□□□ -0.1
LRTM1-202ENST00000493075 TDRD7Q8NHU6 1098 aaKnown RBP14.42□□□□□ -0.1
LRTM1-202ENST00000493075 CCDC102AQ96A19 550 aa14.42□□□□□ -0.1
LRTM1-202ENST00000493075 CDCA5Q96FF9 252 aa14.42□□□□□ -0.1
LRTM1-202ENST00000493075 AOC2O75106 756 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 HIBADHP31937 336 aaKnown RBP14.41□□□□□ -0.1
LRTM1-202ENST00000493075 NOGQ13253 232 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 GRM1Q13255 1194 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms