RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SEC31BQ9NQW1 1179 aa16.84■□□□□ 0.29
PTPN7-216ENST00000492977 UQCRFS1P1P0C7P4 283 aa16.83■□□□□ 0.28
PTPN7-216ENST00000492977 CASTP20810 708 aaKnown RBP16.83■□□□□ 0.28
PTPN7-216ENST00000492977 MCM4P33991 863 aa16.83■□□□□ 0.28
PTPN7-216ENST00000492977 VPS53Q5VIR6 699 aa16.83■□□□□ 0.28
PTPN7-216ENST00000492977 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
PTPN7-216ENST00000492977 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.28
PTPN7-216ENST00000492977 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
PTPN7-216ENST00000492977 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
PTPN7-216ENST00000492977 C4BP0C0L5 1744 aa16.83■□□□□ 0.28
PTPN7-216ENST00000492977 SLC5A1P13866 664 aa16.82■□□□□ 0.28
PTPN7-216ENST00000492977 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
PTPN7-216ENST00000492977 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 ARID4AP29374 1257 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 ZAP70P43403 619 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 SCARF1Q14162 830 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 KRT32Q14532 448 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 ADCK5Q3MIX3 580 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 TRAPPC3LQ5T215 181 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 SEC62Q99442 399 aaKnown RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 ARAP2Q8WZ64 1704 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 MCAMP43121 646 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 SLC27A3Q5K4L6 730 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 CCDC102BQ68D86 513 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 TPTE2Q6XPS3 522 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 BICDL1Q6ZP65 573 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
PTPN7-216ENST00000492977 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 PDRG1Q9NUG6 133 aa16.81■□□□□ 0.28
PTPN7-216ENST00000492977 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
PTPN7-216ENST00000492977 CHGBP05060 677 aa16.8■□□□□ 0.28
PTPN7-216ENST00000492977 RFC4P35249 363 aa16.8■□□□□ 0.28
PTPN7-216ENST00000492977 AK2P54819 239 aa16.8■□□□□ 0.28
PTPN7-216ENST00000492977 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
PTPN7-216ENST00000492977 CLEC17AQ6ZS10 378 aa16.8■□□□□ 0.28
PTPN7-216ENST00000492977 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
PTPN7-216ENST00000492977 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
PTPN7-216ENST00000492977 HELBQ8NG08 1087 aaPredicted RBP16.8■□□□□ 0.28
PTPN7-216ENST00000492977 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTPN7-216ENST00000492977 ZSCAN25Q6NSZ9 544 aa16.79■□□□□ 0.28
PTPN7-216ENST00000492977 ANKRD18AQ8IVF6 992 aa16.79■□□□□ 0.28
PTPN7-216ENST00000492977 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
PTPN7-216ENST00000492977 ALDH8A1Q9H2A2 487 aaPredicted RBP16.79■□□□□ 0.28
PTPN7-216ENST00000492977 LRRC4BQ9NT99 713 aa16.79■□□□□ 0.28
PTPN7-216ENST00000492977 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
PTPN7-216ENST00000492977 ECM2O94769 699 aaPredicted RBP16.78■□□□□ 0.28
PTPN7-216ENST00000492977 CYP2E1P05181 493 aaPredicted RBP16.78■□□□□ 0.28
PTPN7-216ENST00000492977 PHKA1P46020 1223 aa16.78■□□□□ 0.28
PTPN7-216ENST00000492977 NOL8Q76FK4 1167 aaKnown RBP16.78■□□□□ 0.28
PTPN7-216ENST00000492977 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
PTPN7-216ENST00000492977 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
PTPN7-216ENST00000492977 BSDC1Q9NW68 430 aaPredicted RBP16.78■□□□□ 0.28
PTPN7-216ENST00000492977 BRWD3Q6RI45 1802 aa16.78■□□□□ 0.28
PTPN7-216ENST00000492977 MAST3O60307 1309 aa16.78■□□□□ 0.28
PTPN7-216ENST00000492977 CHRNDQ07001 517 aa16.77■□□□□ 0.28
PTPN7-216ENST00000492977 ZNF772Q68DY9 489 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-216ENST00000492977 BLOC1S2Q6QNY1 142 aa16.77■□□□□ 0.28
PTPN7-216ENST00000492977 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
PTPN7-216ENST00000492977 APPBP2Q92624 585 aa16.77■□□□□ 0.28
PTPN7-216ENST00000492977 SH2B1Q9NRF2 756 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-216ENST00000492977 MYH7P12883 1935 aa16.77■□□□□ 0.28
PTPN7-216ENST00000492977 C4AP0C0L4 1744 aa16.77■□□□□ 0.27
PTPN7-216ENST00000492977 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.27
PTPN7-216ENST00000492977 CPA1P15085 419 aa16.77■□□□□ 0.27
PTPN7-216ENST00000492977 PTMSP20962 102 aa16.77■□□□□ 0.27
PTPN7-216ENST00000492977 ANKRD1Q15327 319 aa16.77■□□□□ 0.27
PTPN7-216ENST00000492977 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.27
PTPN7-216ENST00000492977 OSBP2Q969R2 916 aa16.77■□□□□ 0.27
PTPN7-216ENST00000492977 CASZ1Q86V15 1759 aa16.76■□□□□ 0.27
PTPN7-216ENST00000492977 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
PTPN7-216ENST00000492977 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
PTPN7-216ENST00000492977 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
PTPN7-216ENST00000492977 SLFNL1Q499Z3 407 aa16.76■□□□□ 0.27
PTPN7-216ENST00000492977 PI16Q6UXB8 463 aa16.76■□□□□ 0.27
PTPN7-216ENST00000492977 M0R2C6 588 aa16.75■□□□□ 0.27
PTPN7-216ENST00000492977 CYP21A2P08686 494 aa16.75■□□□□ 0.27
PTPN7-216ENST00000492977 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.75■□□□□ 0.27
PTPN7-216ENST00000492977 PHF14O94880 888 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 TRIM37O94972 964 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
PTPN7-216ENST00000492977 ADD2P35612 726 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 UBE3CQ15386 1083 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 SPATA5Q8NB90 893 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 NEK1Q96PY6 1258 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
PTPN7-216ENST00000492977 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
PTPN7-216ENST00000492977 RPS8P62241 208 aaKnown RBP16.73■□□□□ 0.27
PTPN7-216ENST00000492977 PIH1D3Q9NQM4 214 aaKnown RBP16.73■□□□□ 0.27
PTPN7-216ENST00000492977 MINPP1Q9UNW1 487 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms