RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 COL4A1P02462 1669 aa15.81■□□□□ 0.12
COL6A1-205ENST00000492851 KCNJ4P48050 445 aa15.81■□□□□ 0.12
COL6A1-205ENST00000492851 BRPF1P55201 1214 aaPredicted RBP15.81■□□□□ 0.12
COL6A1-205ENST00000492851 HUNKP57058 714 aa15.81■□□□□ 0.12
COL6A1-205ENST00000492851 BEND3Q5T5X7 828 aa15.81■□□□□ 0.12
COL6A1-205ENST00000492851 GMLQ99445 158 aa15.81■□□□□ 0.12
COL6A1-205ENST00000492851 MYOZ2Q9NPC6 264 aa15.81■□□□□ 0.12
COL6A1-205ENST00000492851 TRPM7Q96QT4 1865 aa15.8■□□□□ 0.12
COL6A1-205ENST00000492851 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
COL6A1-205ENST00000492851 HSPA8P11142 646 aaKnown RBP15.8■□□□□ 0.12
COL6A1-205ENST00000492851 SCARF1Q14162 830 aa15.8■□□□□ 0.12
COL6A1-205ENST00000492851 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
COL6A1-205ENST00000492851 GBA2Q9HCG7 927 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-205ENST00000492851 C9orf78Q9NZ63 289 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-205ENST00000492851 CAPN15O75808 1086 aa15.79■□□□□ 0.12
COL6A1-205ENST00000492851 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
COL6A1-205ENST00000492851 FKBP1BP68106 108 aa15.79■□□□□ 0.12
COL6A1-205ENST00000492851 CCDC57Q2TAC2 916 aa15.79■□□□□ 0.12
COL6A1-205ENST00000492851 RGMBQ6NW40 437 aa15.79■□□□□ 0.12
COL6A1-205ENST00000492851 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
COL6A1-205ENST00000492851 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
COL6A1-205ENST00000492851 F6X3S4 739 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 GRM8O00222 908 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 AOC2O75106 756 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 CHRNDQ07001 517 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 DACT2Q5SW24 774 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 ANGEL2Q5VTE6 544 aaKnown RBP15.78■□□□□ 0.12
COL6A1-205ENST00000492851 TTLL5Q6EMB2 1281 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 REM2Q8IYK8 340 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-205ENST00000492851 SRCIN1Q9C0H9 1055 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 HDAC9Q9UKV0 1011 aa15.78■□□□□ 0.12
COL6A1-205ENST00000492851 CACNA1FO60840 1977 aa15.77■□□□□ 0.12
COL6A1-205ENST00000492851 ADM5C9JUS6 153 aa15.77■□□□□ 0.12
COL6A1-205ENST00000492851 FOXO4P98177 505 aa15.77■□□□□ 0.12
COL6A1-205ENST00000492851 TAF7LQ5H9L4 462 aa15.77■□□□□ 0.12
COL6A1-205ENST00000492851 C15orf52Q6ZUT6 534 aaKnown RBP15.77■□□□□ 0.12
COL6A1-205ENST00000492851 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
COL6A1-205ENST00000492851 WTIPA6NIX2 430 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-205ENST00000492851 ZNF157P51786 506 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-205ENST00000492851 SLC4A10Q6U841 1118 aa15.76■□□□□ 0.11
COL6A1-205ENST00000492851 LMBR1LQ6UX01 489 aa15.76■□□□□ 0.11
COL6A1-205ENST00000492851 FBXW7Q969H0 707 aa15.76■□□□□ 0.11
COL6A1-205ENST00000492851 CDCA5Q96FF9 252 aa15.76■□□□□ 0.11
COL6A1-205ENST00000492851 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
COL6A1-205ENST00000492851 ZNF521Q96K83 1311 aa15.75■□□□□ 0.11
COL6A1-205ENST00000492851 E9PSI1 815 aa15.75■□□□□ 0.11
COL6A1-205ENST00000492851 LDHAL6AQ6ZMR3 332 aa15.75■□□□□ 0.11
COL6A1-205ENST00000492851 CD209Q9NNX6 404 aa15.75■□□□□ 0.11
COL6A1-205ENST00000492851 MYH3P11055 1940 aa15.74■□□□□ 0.11
COL6A1-205ENST00000492851 NF2P35240 595 aa15.74■□□□□ 0.11
COL6A1-205ENST00000492851 ZNF804AQ7Z570 1209 aa15.74■□□□□ 0.11
COL6A1-205ENST00000492851 TXNRD3Q86VQ6 643 aa15.74■□□□□ 0.11
COL6A1-205ENST00000492851 CNNM1Q9NRU3 951 aa15.74■□□□□ 0.11
COL6A1-205ENST00000492851 PTPRCP08575 1304 aa15.73■□□□□ 0.11
COL6A1-205ENST00000492851 GTF2IP78347 998 aa15.73■□□□□ 0.11
COL6A1-205ENST00000492851 DLK2Q6UY11 383 aa15.73■□□□□ 0.11
COL6A1-205ENST00000492851 SAGE1Q9NXZ1 904 aa15.73■□□□□ 0.11
COL6A1-205ENST00000492851 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
COL6A1-205ENST00000492851 WNT10BO00744 389 aa15.72■□□□□ 0.11
COL6A1-205ENST00000492851 TAF5LO75529 589 aa15.72■□□□□ 0.11
COL6A1-205ENST00000492851 FKBP1AP62942 108 aaKnown RBP15.72■□□□□ 0.11
COL6A1-205ENST00000492851 NBPF9Q3BBW0 867 aa15.72■□□□□ 0.11
COL6A1-205ENST00000492851 SCN9AQ15858 1988 aa15.72■□□□□ 0.11
COL6A1-205ENST00000492851 ASTN2O75129 1339 aaPredicted RBP15.71■□□□□ 0.11
COL6A1-205ENST00000492851 IL1R1P14778 569 aa15.71■□□□□ 0.11
COL6A1-205ENST00000492851 APOBEC3FQ8IUX4 373 aaKnown RBP15.71■□□□□ 0.11
COL6A1-205ENST00000492851 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
COL6A1-205ENST00000492851 UTYO14607 1347 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 MYO1BO43795 1136 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 SLC10A3P09131 477 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 KLRK1P26718 216 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 KIF23Q02241 960 aaPredicted RBP15.7■□□□□ 0.1
COL6A1-205ENST00000492851 UBE4AQ14139 1066 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 DLGAP5Q15398 846 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
COL6A1-205ENST00000492851 MTMR14Q8NCE2 650 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 HELBQ8NG08 1087 aaPredicted RBP15.7■□□□□ 0.1
COL6A1-205ENST00000492851 MXD3Q9BW11 206 aa15.7■□□□□ 0.1
COL6A1-205ENST00000492851 PSME4Q14997 1843 aa15.69■□□□□ 0.1
COL6A1-205ENST00000492851 PLIN1O60240 522 aa15.69■□□□□ 0.1
COL6A1-205ENST00000492851 SASH1O94885 1247 aa15.69■□□□□ 0.1
COL6A1-205ENST00000492851 SLFN5Q08AF3 891 aa15.69■□□□□ 0.1
COL6A1-205ENST00000492851 ALDH1L2Q3SY69 923 aa15.69■□□□□ 0.1
COL6A1-205ENST00000492851 ABHD8Q96I13 439 aa15.69■□□□□ 0.1
COL6A1-205ENST00000492851 MROH5Q6ZUA9 1318 aa15.68■□□□□ 0.1
COL6A1-205ENST00000492851 IRS2Q9Y4H2 1338 aa15.68■□□□□ 0.1
COL6A1-205ENST00000492851 CT47B1P0C2W7 299 aaPredicted RBP15.68■□□□□ 0.1
COL6A1-205ENST00000492851 TTLL12Q14166 644 aaPredicted RBP15.68■□□□□ 0.1
COL6A1-205ENST00000492851 ZNF594Q96JF6 807 aaPredicted RBP15.68■□□□□ 0.1
COL6A1-205ENST00000492851 TSKSQ9UJT2 592 aa15.68■□□□□ 0.1
COL6A1-205ENST00000492851 NBPF7P0C2Y1 421 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-205ENST00000492851 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-205ENST00000492851 ARMC9Q7Z3E5 817 aa15.67■□□□□ 0.1
COL6A1-205ENST00000492851 SUCLG2Q96I99 432 aa15.67■□□□□ 0.1
COL6A1-205ENST00000492851 ZBED3Q96IU2 234 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-205ENST00000492851 CSRNP1Q96S65 589 aa15.67■□□□□ 0.1
COL6A1-205ENST00000492851 ZIC5Q96T25 663 aa15.67■□□□□ 0.1
COL6A1-205ENST00000492851 PPP2R3BQ9Y5P8 575 aa15.67■□□□□ 0.1
COL6A1-205ENST00000492851 SNAP23O00161 211 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms