RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ZNF775Q96BV0 537 aaPredicted RBP6.49□□□□□ -1.37
CLK1-213ENST00000492793 PBX4Q9BYU1 374 aa6.49□□□□□ -1.37
CLK1-213ENST00000492793 BACH2Q9BYV9 841 aa6.49□□□□□ -1.37
CLK1-213ENST00000492793 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
CLK1-213ENST00000492793 DZANK1Q9NVP4 752 aa6.49□□□□□ -1.37
CLK1-213ENST00000492793 FAM8A1Q9UBU6 413 aa6.49□□□□□ -1.37
CLK1-213ENST00000492793 PDE2AO00408 941 aaPredicted RBP6.48□□□□□ -1.37
CLK1-213ENST00000492793 RGS9O75916 674 aaPredicted RBP6.48□□□□□ -1.37
CLK1-213ENST00000492793 HOXD8P13378 290 aaPredicted RBP6.48□□□□□ -1.37
CLK1-213ENST00000492793 GMPRP36959 345 aa6.48□□□□□ -1.37
CLK1-213ENST00000492793 KRT76Q01546 638 aa6.48□□□□□ -1.37
CLK1-213ENST00000492793 MRPL58Q14197 206 aaKnown RBP6.48□□□□□ -1.37
CLK1-213ENST00000492793 SLCO4C1Q6ZQN7 724 aa6.48□□□□□ -1.37
CLK1-213ENST00000492793 ACDQ96AP0 544 aa6.48□□□□□ -1.37
CLK1-213ENST00000492793 HHIPQ96QV1 700 aa6.48□□□□□ -1.37
CLK1-213ENST00000492793 SRCIN1Q9C0H9 1055 aa6.48□□□□□ -1.37
CLK1-213ENST00000492793 JPH1Q9HDC5 661 aaPredicted RBP6.48□□□□□ -1.37
CLK1-213ENST00000492793 TTF2Q9UNY4 1162 aaKnown RBP6.48□□□□□ -1.37
CLK1-213ENST00000492793 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
CLK1-213ENST00000492793 METTL12A8MUP2 240 aa6.47□□□□□ -1.37
CLK1-213ENST00000492793 RECKO95980 971 aa6.47□□□□□ -1.37
CLK1-213ENST00000492793 GSTT1P30711 240 aa6.47□□□□□ -1.37
CLK1-213ENST00000492793 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
CLK1-213ENST00000492793 NAGPAQ9UK23 515 aa6.47□□□□□ -1.37
CLK1-213ENST00000492793 TMEM238LA0A1B0GVL6 79 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 EPXP11678 715 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 VAMP1P23763 118 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 CDC25BP30305 580 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 SPRED3Q2MJR0 410 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 TMEM102Q8N9M5 508 aaPredicted RBP6.46□□□□□ -1.38
CLK1-213ENST00000492793 NXPE3Q969Y0 559 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 CRELD1Q96HD1 420 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 TCF12Q99081 682 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 POP1Q99575 1024 aaKnown RBP6.46□□□□□ -1.38
CLK1-213ENST00000492793 TRIM33Q9UPN9 1127 aa6.46□□□□□ -1.38
CLK1-213ENST00000492793 A0A096LPE4 126 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 A0A1W2PPZ6 126 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 TCF3P15923 654 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 PTPRAP18433 802 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 GRIA4P48058 902 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 MAP3K10Q02779 954 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 MEI1Q5TIA1 1274 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 CCNJLQ8IV13 435 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 GLIS3Q8NEA6 775 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 LPIN3Q9BQK8 851 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 RRAGCQ9HB90 399 aa6.45□□□□□ -1.38
CLK1-213ENST00000492793 M0R082 166 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 NFKBIEO00221 500 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 SCAMP3O14828 347 aaKnown RBP6.44□□□□□ -1.38
CLK1-213ENST00000492793 FBXO24O75426 580 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 CTSHP09668 335 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 BCRP11274 1271 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 CABP4P57796 275 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 TAF1CQ15572 869 aaPredicted RBP6.44□□□□□ -1.38
CLK1-213ENST00000492793 C9orf131Q5VYM1 1079 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 TPTE2Q6XPS3 522 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 C1orf229Q6ZS94 237 aaPredicted RBP6.44□□□□□ -1.38
CLK1-213ENST00000492793 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 NEDD1Q8NHV4 660 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 ZNF417Q8TAU3 575 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 ZNF587Q96SQ5 575 aaPredicted RBP6.44□□□□□ -1.38
CLK1-213ENST00000492793 ABCB6Q9NP58 842 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 FRRS1LQ9P0K9 344 aa6.44□□□□□ -1.38
CLK1-213ENST00000492793 GPN3Q9UHW5 284 aaPredicted RBP6.44□□□□□ -1.38
CLK1-213ENST00000492793 OIP5O43482 229 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 LILRB5O75023 590 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 ALBP02768 609 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 XRCC5P13010 732 aaKnown RBP6.43□□□□□ -1.38
CLK1-213ENST00000492793 ZNF76P36508 570 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 ZNF157P51786 506 aaPredicted RBP6.43□□□□□ -1.38
CLK1-213ENST00000492793 PRPF40BQ6NWY9 871 aaKnown RBP6.43□□□□□ -1.38
CLK1-213ENST00000492793 LYPD4Q6UWN0 246 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 SVOPQ8N4V2 548 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 RNF34Q969K3 372 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 BHLHE41Q9C0J9 482 aaPredicted RBP6.43□□□□□ -1.38
CLK1-213ENST00000492793 MUC3BQ9H195 1237 aa6.43□□□□□ -1.38
CLK1-213ENST00000492793 SH2B1Q9NRF2 756 aaPredicted RBP6.43□□□□□ -1.38
CLK1-213ENST00000492793 CELA2BP08218 269 aaPredicted RBP6.42□□□□□ -1.38
CLK1-213ENST00000492793 CDC27P30260 824 aa6.42□□□□□ -1.38
CLK1-213ENST00000492793 CCDC85BQ15834 202 aaPredicted RBP6.42□□□□□ -1.38
CLK1-213ENST00000492793 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
CLK1-213ENST00000492793 KANK3Q6NY19 840 aa6.42□□□□□ -1.38
CLK1-213ENST00000492793 TREML4Q6UXN2 200 aa6.42□□□□□ -1.38
CLK1-213ENST00000492793 C8orf86Q6ZUL3 223 aa6.42□□□□□ -1.38
CLK1-213ENST00000492793 IL22RA1Q8N6P7 574 aa6.42□□□□□ -1.38
CLK1-213ENST00000492793 BTBD6Q96KE9 485 aa6.42□□□□□ -1.38
CLK1-213ENST00000492793 ZFYVE1Q9HBF4 777 aa6.42□□□□□ -1.38
CLK1-213ENST00000492793 SHISA8B8ZZ34 492 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 SLURP2P0DP57 97 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 MAP3K11Q16584 847 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 FAM117BQ6P1L5 589 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 TXNDC11Q6PKC3 985 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 WFDC8Q8IUA0 241 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 WHAMMQ8TF30 809 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 SLC7A3Q8WY07 619 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 ENAMQ9NRM1 1142 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 STARD13Q9Y3M8 1113 aa6.41□□□□□ -1.38
CLK1-213ENST00000492793 ERCC5P28715 1186 aaPredicted RBP6.4□□□□□ -1.38
CLK1-213ENST00000492793 PCDH1Q08174 1060 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms