RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
PTPRE-210ENST00000492479 EVI5LQ96CN4 794 aa16.68■□□□□ 0.26
PTPRE-210ENST00000492479 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
PTPRE-210ENST00000492479 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
PTPRE-210ENST00000492479 KCNA3P22001 575 aa16.67■□□□□ 0.26
PTPRE-210ENST00000492479 CCDC102BQ68D86 513 aa16.67■□□□□ 0.26
PTPRE-210ENST00000492479 FBXO33Q7Z6M2 555 aa16.67■□□□□ 0.26
PTPRE-210ENST00000492479 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
PTPRE-210ENST00000492479 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
PTPRE-210ENST00000492479 DOCK2Q92608 1830 aa16.67■□□□□ 0.26
PTPRE-210ENST00000492479 MED23Q9ULK4 1368 aa16.66■□□□□ 0.26
PTPRE-210ENST00000492479 SEMA3EO15041 775 aa16.66■□□□□ 0.26
PTPRE-210ENST00000492479 CHRNA5P30532 468 aa16.66■□□□□ 0.26
PTPRE-210ENST00000492479 GPSM2P81274 684 aa16.66■□□□□ 0.26
PTPRE-210ENST00000492479 PRPF40BQ6NWY9 871 aaKnown RBP16.66■□□□□ 0.26
PTPRE-210ENST00000492479 MYH13Q9UKX3 1938 aa16.65■□□□□ 0.26
PTPRE-210ENST00000492479 IGSF3O75054 1194 aa16.65■□□□□ 0.26
PTPRE-210ENST00000492479 PHKA1P46020 1223 aa16.65■□□□□ 0.26
PTPRE-210ENST00000492479 TTC39AQ5SRH9 613 aa16.65■□□□□ 0.26
PTPRE-210ENST00000492479 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
PTPRE-210ENST00000492479 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
PTPRE-210ENST00000492479 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
PTPRE-210ENST00000492479 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
PTPRE-210ENST00000492479 MYH7P12883 1935 aa16.64■□□□□ 0.26
PTPRE-210ENST00000492479 SNAP23O00161 211 aa16.64■□□□□ 0.25
PTPRE-210ENST00000492479 MCAMP43121 646 aa16.64■□□□□ 0.25
PTPRE-210ENST00000492479 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
PTPRE-210ENST00000492479 TBC1D16Q8TBP0 767 aa16.64■□□□□ 0.25
PTPRE-210ENST00000492479 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.25
PTPRE-210ENST00000492479 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
PTPRE-210ENST00000492479 ANKIB1Q9P2G1 1089 aa16.64■□□□□ 0.25
PTPRE-210ENST00000492479 GGA1Q9UJY5 639 aa16.64■□□□□ 0.25
PTPRE-210ENST00000492479 HIP1O00291 1037 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 DPEP1P16444 411 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 KCNJ4P48050 445 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 CAVIN4Q5BKX8 364 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 TTLL6Q8N841 843 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 BCL11AQ9H165 835 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 SNRKQ9NRH2 765 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 GNL3LQ9NVN8 582 aaKnown RBP16.63■□□□□ 0.25
PTPRE-210ENST00000492479 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
PTPRE-210ENST00000492479 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
PTPRE-210ENST00000492479 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 CHMLP26374 656 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 BCAMP50895 628 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 SCARF1Q14162 830 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 POLLQ9UGP5 575 aa16.62■□□□□ 0.25
PTPRE-210ENST00000492479 NSFL1CQ9UNZ2 370 aaKnown RBP16.62■□□□□ 0.25
PTPRE-210ENST00000492479 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
PTPRE-210ENST00000492479 EPB41L2O43491 1005 aaKnown RBP16.61■□□□□ 0.25
PTPRE-210ENST00000492479 TTF1Q15361 905 aaPredicted RBP16.61■□□□□ 0.25
PTPRE-210ENST00000492479 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
PTPRE-210ENST00000492479 TMED8Q6PL24 325 aaPredicted RBP16.61■□□□□ 0.25
PTPRE-210ENST00000492479 MPNDQ8N594 471 aa16.61■□□□□ 0.25
PTPRE-210ENST00000492479 TMX4Q9H1E5 349 aaPredicted RBP16.61■□□□□ 0.25
PTPRE-210ENST00000492479 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
PTPRE-210ENST00000492479 UFL1O94874 794 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 KLRK1P26718 216 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 HIBADHP31937 336 aaKnown RBP16.6■□□□□ 0.25
PTPRE-210ENST00000492479 GYG1P46976 350 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 CASC1Q6TDU7 716 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
PTPRE-210ENST00000492479 RILPL2Q969X0 211 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 RAD50Q92878 1312 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 FER1L6Q2WGJ9 1857 aa16.6■□□□□ 0.25
PTPRE-210ENST00000492479 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 IL1R1P14778 569 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 ZAP70P43403 619 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
PTPRE-210ENST00000492479 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 PSMD1Q99460 953 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 VPS33BQ9H267 617 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
PTPRE-210ENST00000492479 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
PTPRE-210ENST00000492479 GOLIM4O00461 696 aa16.58■□□□□ 0.24
PTPRE-210ENST00000492479 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
PTPRE-210ENST00000492479 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
PTPRE-210ENST00000492479 ZFYP08048 801 aaPredicted RBP16.58■□□□□ 0.24
PTPRE-210ENST00000492479 LRRFIP1Q32MZ4 808 aaKnown RBP16.58■□□□□ 0.24
PTPRE-210ENST00000492479 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
PTPRE-210ENST00000492479 EYA3Q99504 573 aa16.58■□□□□ 0.24
PTPRE-210ENST00000492479 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
PTPRE-210ENST00000492479 MAST2Q6P0Q8 1798 aa16.58■□□□□ 0.24
PTPRE-210ENST00000492479 CCDC93Q567U6 631 aa16.57■□□□□ 0.24
PTPRE-210ENST00000492479 VPS37DQ86XT2 251 aa16.57■□□□□ 0.24
PTPRE-210ENST00000492479 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
PTPRE-210ENST00000492479 EDC3Q96F86 508 aaKnown RBP16.57■□□□□ 0.24
PTPRE-210ENST00000492479 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
PTPRE-210ENST00000492479 FSD1Q9BTV5 496 aa16.57■□□□□ 0.24
PTPRE-210ENST00000492479 COA1Q9GZY4 146 aa16.57■□□□□ 0.24
PTPRE-210ENST00000492479 CHD4Q14839 1912 aa16.57■□□□□ 0.24
PTPRE-210ENST00000492479 ZNF646O15015 1829 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms