RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 PODNQ7Z5L7 613 aa18.6■□□□□ 0.57
SS18L1-205ENST00000492466 DCPSQ96C86 337 aaKnown RBP18.6■□□□□ 0.57
SS18L1-205ENST00000492466 BEGAINQ9BUH8 593 aa18.6■□□□□ 0.57
SS18L1-205ENST00000492466 ZNF646O15015 1829 aaPredicted RBP18.6■□□□□ 0.57
SS18L1-205ENST00000492466 SPEF2Q9C093 1822 aa18.6■□□□□ 0.57
SS18L1-205ENST00000492466 MED23Q9ULK4 1368 aa18.59■□□□□ 0.57
SS18L1-205ENST00000492466 G3V3G9 751 aa18.59■□□□□ 0.57
SS18L1-205ENST00000492466 CSF1RP07333 972 aa18.59■□□□□ 0.57
SS18L1-205ENST00000492466 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
SS18L1-205ENST00000492466 TXNRD3Q86VQ6 643 aa18.59■□□□□ 0.57
SS18L1-205ENST00000492466 GBA2Q9HCG7 927 aaPredicted RBP18.59■□□□□ 0.57
SS18L1-205ENST00000492466 GGA3Q9NZ52 723 aa18.59■□□□□ 0.57
SS18L1-205ENST00000492466 USP17L3A6NCW0 530 aa18.58■□□□□ 0.56
SS18L1-205ENST00000492466 USP17L4A6NCW7 530 aa18.58■□□□□ 0.56
SS18L1-205ENST00000492466 CCT4P50991 539 aaKnown RBP18.58■□□□□ 0.56
SS18L1-205ENST00000492466 NOGQ13253 232 aa18.58■□□□□ 0.56
SS18L1-205ENST00000492466 SCARF1Q14162 830 aa18.58■□□□□ 0.56
SS18L1-205ENST00000492466 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
SS18L1-205ENST00000492466 USP17L1Q7RTZ2 530 aa18.58■□□□□ 0.56
SS18L1-205ENST00000492466 ABHD8Q96I13 439 aa18.58■□□□□ 0.56
SS18L1-205ENST00000492466 F6X3S4 739 aa18.57■□□□□ 0.56
SS18L1-205ENST00000492466 CA12O43570 354 aa18.57■□□□□ 0.56
SS18L1-205ENST00000492466 CT47B1P0C2W7 299 aaPredicted RBP18.57■□□□□ 0.56
SS18L1-205ENST00000492466 USP17L8P0C7I0 530 aa18.57■□□□□ 0.56
SS18L1-205ENST00000492466 DACT2Q5SW24 774 aa18.57■□□□□ 0.56
SS18L1-205ENST00000492466 RGMBQ6NW40 437 aa18.57■□□□□ 0.56
SS18L1-205ENST00000492466 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 ANGEL2Q5VTE6 544 aaKnown RBP18.56■□□□□ 0.56
SS18L1-205ENST00000492466 SULF1Q8IWU6 871 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 C2orf69Q8N8R5 385 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 LINS1Q8NG48 757 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 MXD3Q9BW11 206 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 MYOZ2Q9NPC6 264 aa18.56■□□□□ 0.56
SS18L1-205ENST00000492466 ITGA6P23229 1130 aa18.55■□□□□ 0.56
SS18L1-205ENST00000492466 KLRK1P26718 216 aa18.55■□□□□ 0.56
SS18L1-205ENST00000492466 ALDH1L2Q3SY69 923 aa18.55■□□□□ 0.56
SS18L1-205ENST00000492466 SSH1Q8WYL5 1049 aa18.55■□□□□ 0.56
SS18L1-205ENST00000492466 PTPRCP08575 1304 aa18.54■□□□□ 0.56
SS18L1-205ENST00000492466 CASP8AP2Q9UKL3 1982 aa18.54■□□□□ 0.56
SS18L1-205ENST00000492466 TRMT2AQ8IZ69 625 aaKnown RBP18.54■□□□□ 0.56
SS18L1-205ENST00000492466 MRPL50Q8N5N7 158 aaKnown RBP18.54■□□□□ 0.56
SS18L1-205ENST00000492466 LEMD3Q9Y2U8 911 aa18.54■□□□□ 0.56
SS18L1-205ENST00000492466 PITPNM2Q9BZ72 1349 aa18.53■□□□□ 0.56
SS18L1-205ENST00000492466 IRS2Q9Y4H2 1338 aa18.53■□□□□ 0.56
SS18L1-205ENST00000492466 IGHMBP2P38935 993 aaKnown RBP18.53■□□□□ 0.56
SS18L1-205ENST00000492466 NBPF9Q3BBW0 867 aa18.53■□□□□ 0.56
SS18L1-205ENST00000492466 STRIP1Q5VSL9 837 aa18.53■□□□□ 0.56
SS18L1-205ENST00000492466 COA1Q9GZY4 146 aa18.53■□□□□ 0.56
SS18L1-205ENST00000492466 SCAF8Q9UPN6 1271 aaKnown RBP18.53■□□□□ 0.56
SS18L1-205ENST00000492466 ZNF804BA4D1E1 1349 aa18.52■□□□□ 0.56
SS18L1-205ENST00000492466 ZNF157P51786 506 aaPredicted RBP18.52■□□□□ 0.56
SS18L1-205ENST00000492466 FOXO4P98177 505 aa18.52■□□□□ 0.56
SS18L1-205ENST00000492466 KIF23Q02241 960 aaPredicted RBP18.52■□□□□ 0.56
SS18L1-205ENST00000492466 BEND3Q5T5X7 828 aa18.52■□□□□ 0.56
SS18L1-205ENST00000492466 CCDC102AQ96A19 550 aa18.52■□□□□ 0.56
SS18L1-205ENST00000492466 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
SS18L1-205ENST00000492466 SLC10A3P09131 477 aa18.51■□□□□ 0.55
SS18L1-205ENST00000492466 SRCIN1Q9C0H9 1055 aa18.51■□□□□ 0.55
SS18L1-205ENST00000492466 ANKRD2Q9GZV1 360 aa18.51■□□□□ 0.55
SS18L1-205ENST00000492466 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
SS18L1-205ENST00000492466 SNAP23O00161 211 aa18.5■□□□□ 0.55
SS18L1-205ENST00000492466 WNT10BO00744 389 aa18.5■□□□□ 0.55
SS18L1-205ENST00000492466 CHRNDQ07001 517 aa18.5■□□□□ 0.55
SS18L1-205ENST00000492466 CSRNP1Q96S65 589 aa18.5■□□□□ 0.55
SS18L1-205ENST00000492466 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
SS18L1-205ENST00000492466 EPHA10Q5JZY3 1008 aa18.49■□□□□ 0.55
SS18L1-205ENST00000492466 PRAMEF18Q5VWM3 479 aa18.49■□□□□ 0.55
SS18L1-205ENST00000492466 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
SS18L1-205ENST00000492466 MOB2Q70IA6 237 aa18.49■□□□□ 0.55
SS18L1-205ENST00000492466 CHMP3Q9Y3E7 222 aa18.49■□□□□ 0.55
SS18L1-205ENST00000492466 MYO3BQ8WXR4 1341 aa18.49■□□□□ 0.55
SS18L1-205ENST00000492466 FKBP1BP68106 108 aa18.48■□□□□ 0.55
SS18L1-205ENST00000492466 RASAL3Q86YV0 1011 aa18.48■□□□□ 0.55
SS18L1-205ENST00000492466 ZBED3Q96IU2 234 aaPredicted RBP18.48■□□□□ 0.55
SS18L1-205ENST00000492466 MCOLN1Q9GZU1 580 aa18.48■□□□□ 0.55
SS18L1-205ENST00000492466 PAPPA2Q9BXP8 1791 aa18.47■□□□□ 0.55
SS18L1-205ENST00000492466 ANKRD18BA2A2Z9 1011 aa18.47■□□□□ 0.55
SS18L1-205ENST00000492466 TAF5LO75529 589 aa18.47■□□□□ 0.55
SS18L1-205ENST00000492466 ALDH1L1O75891 902 aa18.47■□□□□ 0.55
SS18L1-205ENST00000492466 C15orf52Q6ZUT6 534 aaKnown RBP18.47■□□□□ 0.55
SS18L1-205ENST00000492466 CD209Q9NNX6 404 aa18.47■□□□□ 0.55
SS18L1-205ENST00000492466 RNF186Q9NXI6 227 aa18.47■□□□□ 0.55
SS18L1-205ENST00000492466 SAGE1Q9NXZ1 904 aa18.47■□□□□ 0.55
SS18L1-205ENST00000492466 TNRC18O15417 2968 aaPredicted RBP18.46■□□□□ 0.55
SS18L1-205ENST00000492466 A0A1B0GUL6 1792 aa18.46■□□□□ 0.55
SS18L1-205ENST00000492466 GRM8O00222 908 aa18.46■□□□□ 0.55
SS18L1-205ENST00000492466 MMP14P50281 582 aa18.46■□□□□ 0.55
SS18L1-205ENST00000492466 RARSP54136 660 aaKnown RBP18.46■□□□□ 0.55
SS18L1-205ENST00000492466 GTF2IP78347 998 aa18.46■□□□□ 0.55
SS18L1-205ENST00000492466 OGFOD1Q8N543 542 aa18.46■□□□□ 0.55
SS18L1-205ENST00000492466 HELBQ8NG08 1087 aaPredicted RBP18.46■□□□□ 0.55
SS18L1-205ENST00000492466 API5Q9BZZ5 524 aaKnown RBP18.46■□□□□ 0.55
SS18L1-205ENST00000492466 TRPA1O75762 1119 aa18.45■□□□□ 0.54
SS18L1-205ENST00000492466 SASH1O94885 1247 aa18.45■□□□□ 0.54
SS18L1-205ENST00000492466 IFIT5Q13325 482 aaKnown RBP18.45■□□□□ 0.54
SS18L1-205ENST00000492466 LMBR1LQ6UX01 489 aa18.45■□□□□ 0.54
SS18L1-205ENST00000492466 KIAA0825Q8IV33 1275 aa18.45■□□□□ 0.54
SS18L1-205ENST00000492466 CERS5Q8N5B7 392 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms