RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 PLIN1O60240 522 aa17.22■□□□□ 0.35
PTPN7-215ENST00000492451 TAF5LO75529 589 aa17.22■□□□□ 0.35
PTPN7-215ENST00000492451 RFX5P48382 616 aaPredicted RBP17.22■□□□□ 0.35
PTPN7-215ENST00000492451 C15orf52Q6ZUT6 534 aaKnown RBP17.22■□□□□ 0.35
PTPN7-215ENST00000492451 PANK1Q8TE04 598 aa17.22■□□□□ 0.35
PTPN7-215ENST00000492451 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
PTPN7-215ENST00000492451 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
PTPN7-215ENST00000492451 SHTN1A0MZ66 631 aa17.21■□□□□ 0.35
PTPN7-215ENST00000492451 EYA2O00167 538 aa17.21■□□□□ 0.35
PTPN7-215ENST00000492451 ZBTB7BO15156 539 aaPredicted RBP17.21■□□□□ 0.35
PTPN7-215ENST00000492451 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
PTPN7-215ENST00000492451 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPN7-215ENST00000492451 UBE4AQ14139 1066 aa17.21■□□□□ 0.35
PTPN7-215ENST00000492451 METTL24Q5JXM2 366 aa17.21■□□□□ 0.35
PTPN7-215ENST00000492451 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
PTPN7-215ENST00000492451 SRGAP3O43295 1099 aa17.2■□□□□ 0.34
PTPN7-215ENST00000492451 CIAO1O76071 339 aa17.2■□□□□ 0.34
PTPN7-215ENST00000492451 GMPSP49915 693 aaPredicted RBP17.2■□□□□ 0.34
PTPN7-215ENST00000492451 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
PTPN7-215ENST00000492451 LRRC24Q50LG9 513 aa17.2■□□□□ 0.34
PTPN7-215ENST00000492451 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
PTPN7-215ENST00000492451 CHMP4BQ9H444 224 aaKnown RBP17.2■□□□□ 0.34
PTPN7-215ENST00000492451 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
PTPN7-215ENST00000492451 PSMD14O00487 310 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 PDE8BO95263 885 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 RPS12P25398 132 aaKnown RBP17.19■□□□□ 0.34
PTPN7-215ENST00000492451 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
PTPN7-215ENST00000492451 ZNF804AQ7Z570 1209 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 TXNRD3Q86VQ6 643 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 CREBZFQ9NS37 354 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 GPRC5DQ9NZD1 345 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
PTPN7-215ENST00000492451 USP17L3A6NCW0 530 aa17.18■□□□□ 0.34
PTPN7-215ENST00000492451 USP17L4A6NCW7 530 aa17.18■□□□□ 0.34
PTPN7-215ENST00000492451 VIL1P09327 827 aaKnown RBP17.18■□□□□ 0.34
PTPN7-215ENST00000492451 USP17L1Q7RTZ2 530 aa17.18■□□□□ 0.34
PTPN7-215ENST00000492451 DPF2Q92785 391 aa17.18■□□□□ 0.34
PTPN7-215ENST00000492451 MKRN1Q9UHC7 482 aaKnown RBP17.18■□□□□ 0.34
PTPN7-215ENST00000492451 PSME4Q14997 1843 aa17.18■□□□□ 0.34
PTPN7-215ENST00000492451 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
PTPN7-215ENST00000492451 SCN9AQ15858 1988 aa17.17■□□□□ 0.34
PTPN7-215ENST00000492451 SNAP23O00161 211 aa17.17■□□□□ 0.34
PTPN7-215ENST00000492451 KLRK1P26718 216 aa17.17■□□□□ 0.34
PTPN7-215ENST00000492451 IL15P40933 162 aaPredicted RBP17.17■□□□□ 0.34
PTPN7-215ENST00000492451 ATG9AQ7Z3C6 839 aa17.17■□□□□ 0.34
PTPN7-215ENST00000492451 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
PTPN7-215ENST00000492451 SIL1Q9H173 461 aa17.17■□□□□ 0.34
PTPN7-215ENST00000492451 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
PTPN7-215ENST00000492451 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-215ENST00000492451 ATP8B2P98198 1209 aa17.16■□□□□ 0.34
PTPN7-215ENST00000492451 PUM3Q15397 648 aaKnown RBP17.16■□□□□ 0.34
PTPN7-215ENST00000492451 USP50Q70EL3 339 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-215ENST00000492451 CD209Q9NNX6 404 aa17.16■□□□□ 0.34
PTPN7-215ENST00000492451 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
PTPN7-215ENST00000492451 CEP126Q9P2H0 1117 aa17.16■□□□□ 0.34
PTPN7-215ENST00000492451 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
PTPN7-215ENST00000492451 PCNTO95613 3336 aa17.16■□□□□ 0.34
PTPN7-215ENST00000492451 ZNF609O15014 1411 aa17.15■□□□□ 0.34
PTPN7-215ENST00000492451 H7C1D1 291 aa17.15■□□□□ 0.34
PTPN7-215ENST00000492451 TRAF5O00463 557 aa17.15■□□□□ 0.34
PTPN7-215ENST00000492451 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
PTPN7-215ENST00000492451 STRIP1Q5VSL9 837 aa17.15■□□□□ 0.34
PTPN7-215ENST00000492451 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
PTPN7-215ENST00000492451 AGBL3Q8NEM8 1001 aa17.15■□□□□ 0.34
PTPN7-215ENST00000492451 TRPM4Q8TD43 1214 aa17.15■□□□□ 0.34
PTPN7-215ENST00000492451 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
PTPN7-215ENST00000492451 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
PTPN7-215ENST00000492451 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
PTPN7-215ENST00000492451 IFIT1P09914 478 aaKnown RBP17.14■□□□□ 0.33
PTPN7-215ENST00000492451 IL1R1P14778 569 aa17.14■□□□□ 0.33
PTPN7-215ENST00000492451 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
PTPN7-215ENST00000492451 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
PTPN7-215ENST00000492451 MYO3BQ8WXR4 1341 aa17.14■□□□□ 0.33
PTPN7-215ENST00000492451 CNTNAP1P78357 1384 aa17.14■□□□□ 0.33
PTPN7-215ENST00000492451 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 EGFRP00533 1210 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 SLC5A1P13866 664 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 FGFR2P21802 821 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 POLA2Q14181 598 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 DACT2Q5SW24 774 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 VPS37DQ86XT2 251 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 MICALL2Q8IY33 904 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 LPIN2Q92539 896 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
PTPN7-215ENST00000492451 GYG1P46976 350 aa17.12■□□□□ 0.33
PTPN7-215ENST00000492451 MMP14P50281 582 aa17.12■□□□□ 0.33
PTPN7-215ENST00000492451 GTF2IP78347 998 aa17.12■□□□□ 0.33
PTPN7-215ENST00000492451 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPN7-215ENST00000492451 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
PTPN7-215ENST00000492451 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
PTPN7-215ENST00000492451 FAM84BQ96KN1 310 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-215ENST00000492451 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
PTPN7-215ENST00000492451 SASH1O94885 1247 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 VEGFBP49765 207 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
PTPN7-215ENST00000492451 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms