RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 KDM2BQ8NHM5 1336 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
EPHB4-208ENST00000492403 NFIXQ14938 502 aa13.02□□□□□ -0.33
EPHB4-208ENST00000492403 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.33
EPHB4-208ENST00000492403 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
EPHB4-208ENST00000492403 RNF181Q9P0P0 153 aa13.02□□□□□ -0.33
EPHB4-208ENST00000492403 ZNF521Q96K83 1311 aa13.02□□□□□ -0.33
EPHB4-208ENST00000492403 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
EPHB4-208ENST00000492403 FAM196BA6NMK8 535 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-208ENST00000492403 PDE6BP35913 854 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 IL6STP40189 918 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-208ENST00000492403 ST5P78524 1137 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
EPHB4-208ENST00000492403 AAMPQ13685 434 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
EPHB4-208ENST00000492403 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 ADCY9O60503 1353 aa13.01□□□□□ -0.33
EPHB4-208ENST00000492403 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L15C9J2P7 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L10C9JJH3 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L13C9JLJ4 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L12C9JPN9 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L11C9JVI0 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L21D6R901 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L18D6R9N7 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L22D6RA61 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L17D6RBQ6 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L19D6RCP7 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L20D6RJB6 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 HSPA6P17066 643 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 USP17L24Q0WX57 530 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 DESI1Q6ICB0 168 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 DNAJC14Q6Y2X3 702 aaPredicted RBP13□□□□□ -0.33
EPHB4-208ENST00000492403 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 DEPDC4Q8N2C3 294 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
EPHB4-208ENST00000492403 UTRNP46939 3433 aa13□□□□□ -0.33
EPHB4-208ENST00000492403 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 UBR2Q8IWV8 1755 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
EPHB4-208ENST00000492403 TOMM70O94826 608 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
EPHB4-208ENST00000492403 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 KCNA3P22001 575 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
EPHB4-208ENST00000492403 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
EPHB4-208ENST00000492403 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
EPHB4-208ENST00000492403 MRRFQ96E11 262 aaKnown RBP12.99□□□□□ -0.33
EPHB4-208ENST00000492403 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
EPHB4-208ENST00000492403 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
EPHB4-208ENST00000492403 A1BGP04217 495 aa12.98□□□□□ -0.33
EPHB4-208ENST00000492403 GTF2E1P29083 439 aaPredicted RBP12.98□□□□□ -0.33
EPHB4-208ENST00000492403 CRTC2Q53ET0 693 aaPredicted RBP12.98□□□□□ -0.33
EPHB4-208ENST00000492403 LYPD8Q6UX82 237 aa12.98□□□□□ -0.33
EPHB4-208ENST00000492403 MCM10Q7L590 875 aa12.98□□□□□ -0.33
EPHB4-208ENST00000492403 CNBD1Q8NA66 436 aa12.98□□□□□ -0.33
EPHB4-208ENST00000492403 IGSF5Q9NSI5 407 aa12.98□□□□□ -0.33
EPHB4-208ENST00000492403 MKRN1Q9UHC7 482 aaKnown RBP12.98□□□□□ -0.33
EPHB4-208ENST00000492403 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
EPHB4-208ENST00000492403 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
EPHB4-208ENST00000492403 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
EPHB4-208ENST00000492403 FAM200AQ8TCP9 573 aa12.97□□□□□ -0.33
EPHB4-208ENST00000492403 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
EPHB4-208ENST00000492403 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
EPHB4-208ENST00000492403 IL16Q14005 1332 aa12.96□□□□□ -0.33
EPHB4-208ENST00000492403 LMNB1P20700 586 aa12.96□□□□□ -0.33
EPHB4-208ENST00000492403 FAM174AQ8TBP5 190 aa12.96□□□□□ -0.33
EPHB4-208ENST00000492403 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.33
EPHB4-208ENST00000492403 BRIP1Q9BX63 1249 aa12.96□□□□□ -0.33
EPHB4-208ENST00000492403 KIAA1522Q9P206 1035 aaPredicted RBP12.96□□□□□ -0.33
EPHB4-208ENST00000492403 FKBPLQ9UIM3 349 aa12.96□□□□□ -0.33
EPHB4-208ENST00000492403 GOLGB1Q14789 3259 aaKnown RBP12.96□□□□□ -0.34
EPHB4-208ENST00000492403 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
EPHB4-208ENST00000492403 RASA1P20936 1047 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 APLP1P51693 650 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 Q3C1V9 767 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 NBPF5PQ86XG9 351 aaPredicted RBP12.95□□□□□ -0.34
EPHB4-208ENST00000492403 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
EPHB4-208ENST00000492403 RNF40O75150 1001 aa12.94□□□□□ -0.34
EPHB4-208ENST00000492403 PTK7Q13308 1070 aa12.94□□□□□ -0.34
EPHB4-208ENST00000492403 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
EPHB4-208ENST00000492403 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
EPHB4-208ENST00000492403 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
EPHB4-208ENST00000492403 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
EPHB4-208ENST00000492403 RRAGCQ9HB90 399 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms