RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 DENND2AQ9ULE3 1009 aa17.77■□□□□ 0.43
TNFRSF1B-203ENST00000492361 U2AF2P26368 475 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 NBPF26B4DH59 902 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ZNF213O14771 459 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 NBPF14Q5TI25 921 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 NBPF10Q6P3W6 841 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 NBPF15Q8N660 670 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 M0R2C6 588 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 SLC9C2Q5TAH2 1124 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 AGLP35573 1532 aa17.76■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CCDC112Q8NEF3 446 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 RGPD8O14715 1765 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 SCARF1Q14162 830 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 DNAJC10Q8IXB1 793 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 XAGE2Q96GT9 111 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CLSTN2Q9H4D0 955 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 BCL2L12Q9HB09 334 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 COPRSQ9NQ92 184 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 SKILP12757 684 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 KIF6Q6ZMV9 814 aa17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 TRMT112Q9UI30 125 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1B-203ENST00000492361 EYA2O00167 538 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 RNF113AO15541 343 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ADD1P35611 737 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 TMOD3Q9NYL9 352 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 C3P01024 1663 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ZNF75DP51815 510 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 TMC6Q7Z403 805 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CACTINQ8WUQ7 758 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 HAUS7Q99871 368 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CEP57L1Q8IYX8 460 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 MYRIPQ8NFW9 859 aa17.74■□□□□ 0.43
TNFRSF1B-203ENST00000492361 hCG_1642624A0A1W2PR95 340 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 NSUN7Q8NE18 718 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CLIC4Q9Y696 253 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 GOLGA8FQ08AF8 430 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 GOLGA8DPQ0D2H9 430 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CCDC144BQ3MJ40 725 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 GOLPH3LQ9H4A5 285 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ASAP1Q9ULH1 1129 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 B4E1Z4 1266 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 BICDL1Q6ZP65 573 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 TMEM87AQ8NBN3 555 aa17.73■□□□□ 0.43
TNFRSF1B-203ENST00000492361 MAST3O60307 1309 aa17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 TRIM29Q14134 588 aa17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 SERPINC1P01008 464 aa17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 FGAP02671 866 aa17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1B-203ENST00000492361 PDIA3P30101 505 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1B-203ENST00000492361 RESTQ13127 1097 aa17.71■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ZNF609O15014 1411 aa17.71■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CDK11BP21127 795 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ATP2B3Q16720 1220 aa17.71■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ZSCAN25Q6NSZ9 544 aa17.71■□□□□ 0.43
TNFRSF1B-203ENST00000492361 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
TNFRSF1B-203ENST00000492361 AIDAQ96BJ3 306 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 IFNKQ9P0W0 207 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 JAG2Q9Y219 1238 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 GPAA1O43292 621 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 GTF2E1P29083 439 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 PTPN14Q15678 1187 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 STX1AQ16623 288 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 ZSCAN16Q9H4T2 348 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 NDUFA8P51970 172 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 COL15A1P39059 1388 aa17.7■□□□□ 0.42
TNFRSF1B-203ENST00000492361 USP27XA6NNY8 438 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 CFAP100Q494V2 611 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 ANO10Q9NW15 660 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 MON2Q7Z3U7 1717 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 CPLX2Q6PUV4 134 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 MAP7D2Q96T17 732 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 PES1O00541 588 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 RFX5P48382 616 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 CLIC6Q96NY7 704 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 ALG1Q9BT22 464 aa17.69■□□□□ 0.42
TNFRSF1B-203ENST00000492361 MRPS27Q92552 414 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 HMGB1P09429 215 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 TDO2P48775 406 aa17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 CCDC24Q8N4L8 307 aa17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 CTDNEP1O95476 244 aa17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 CEP135Q66GS9 1140 aa17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 ZNF771Q7L3S4 317 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 PRIMPOLQ96LW4 560 aa17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1B-203ENST00000492361 IFIT3O14879 490 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1B-203ENST00000492361 SPTLC2O15270 562 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms