RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 USP17L1Q7RTZ2 530 aa11.26□□□□□ -0.61
COL6A4P1-203ENST00000491915 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
COL6A4P1-203ENST00000491915 AGBL3Q8NEM8 1001 aa11.26□□□□□ -0.61
COL6A4P1-203ENST00000491915 SMC4Q9NTJ3 1288 aa11.26□□□□□ -0.61
COL6A4P1-203ENST00000491915 MYH3P11055 1940 aa11.26□□□□□ -0.61
COL6A4P1-203ENST00000491915 PTPRCP08575 1304 aa11.26□□□□□ -0.61
COL6A4P1-203ENST00000491915 RARSP54136 660 aaKnown RBP11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 CCDC57Q2TAC2 916 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 DEFB115Q30KQ5 88 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 DACT2Q5SW24 774 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 LDHAL6AQ6ZMR3 332 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 BICC1Q9H694 974 aaKnown RBP11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 CD209Q9NNX6 404 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 RIPOR2Q9Y4F9 1068 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 CNTNAP1P78357 1384 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 MED23Q9ULK4 1368 aa11.25□□□□□ -0.61
COL6A4P1-203ENST00000491915 RASSF10A6NK89 507 aa11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 CELF2O95319 508 aaKnown RBP11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 CT47B1P0C2W7 299 aaPredicted RBP11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 USP17L8P0C7I0 530 aa11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 BRPF1P55201 1214 aaPredicted RBP11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 SCARF1Q14162 830 aa11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 LRRC24Q50LG9 513 aa11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 TTLL5Q6EMB2 1281 aa11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 C15orf52Q6ZUT6 534 aaKnown RBP11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 KLHDC4Q8TBB5 520 aa11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 CNNM1Q9NRU3 951 aa11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
COL6A4P1-203ENST00000491915 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 HSPA1AP0DMV8 641 aaKnown RBP11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 HSPA1BP0DMV9 641 aaKnown RBP11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 KCNJ4P48050 445 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 GTF2IP78347 998 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 TAF7LQ5H9L4 462 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 STRIP1Q5VSL9 837 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 ABT1Q9ULW3 272 aaKnown RBP11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 SPEF2Q9C093 1822 aa11.23□□□□□ -0.61
COL6A4P1-203ENST00000491915 BCAR3O75815 825 aa11.22□□□□□ -0.61
COL6A4P1-203ENST00000491915 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
COL6A4P1-203ENST00000491915 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
COL6A4P1-203ENST00000491915 KRT26Q7Z3Y9 468 aa11.22□□□□□ -0.61
COL6A4P1-203ENST00000491915 WDR33Q9C0J8 1336 aaKnown RBP11.22□□□□□ -0.61
COL6A4P1-203ENST00000491915 MYOZ2Q9NPC6 264 aa11.22□□□□□ -0.61
COL6A4P1-203ENST00000491915 TLL2Q9Y6L7 1015 aa11.22□□□□□ -0.61
COL6A4P1-203ENST00000491915 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 SAPCD2Q86UD0 394 aa11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 CERS5Q8N5B7 392 aa11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 DCPSQ96C86 337 aaKnown RBP11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 FAM84BQ96KN1 310 aaPredicted RBP11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 ZNF408Q9H9D4 720 aa11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 JAG2Q9Y219 1238 aa11.21□□□□□ -0.61
COL6A4P1-203ENST00000491915 IL1R1P14778 569 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 GYG1P46976 350 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 HNRNPUQ00839 825 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 UBE4AQ14139 1066 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 ANGEL2Q5VTE6 544 aaKnown RBP11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 PRAMEF18Q5VWM3 479 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 KIAA0825Q8IV33 1275 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 CAPNS2Q96L46 248 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 PCDHAC2Q9Y5I4 1007 aa11.2□□□□□ -0.62
COL6A4P1-203ENST00000491915 WNT10BO00744 389 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 FOXN1O15353 648 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 AOC2O75106 756 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 PTPN12Q05209 780 aaKnown RBP11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 GRM1Q13255 1194 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 VGLL2Q8N8G2 317 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 TDRD7Q8NHU6 1098 aaKnown RBP11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 ARHGAP45Q92619 1136 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 ZBED3Q96IU2 234 aaPredicted RBP11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 GGA3Q9NZ52 723 aa11.19□□□□□ -0.62
COL6A4P1-203ENST00000491915 ZNF609O15014 1411 aa11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 F8W031 263 aaPredicted RBP11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 SASH1O94885 1247 aa11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 HIBADHP31937 336 aaKnown RBP11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 ATG9AQ7Z3C6 839 aa11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 MEIS3Q99687 375 aa11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 TRPM7Q96QT4 1865 aa11.18□□□□□ -0.62
COL6A4P1-203ENST00000491915 AOX1Q06278 1338 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 MROH5Q6ZUA9 1318 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 EYA2O00167 538 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 PDE8BO95263 885 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 FGFR2P21802 821 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 BCAMP50895 628 aa11.17□□□□□ -0.62
COL6A4P1-203ENST00000491915 GRIK5Q16478 980 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms