RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
SNED1-211ENST00000491761 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
SNED1-211ENST00000491761 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
SNED1-211ENST00000491761 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 TOB2Q14106 344 aaPredicted RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 TSGA10IPQ3SY00 556 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 PDCL3Q9H2J4 239 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 CGNQ9P2M7 1197 aaKnown RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 MED23Q9ULK4 1368 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 RNF113AO15541 343 aaKnown RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 IPO7O95373 1038 aaKnown RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 HSP90B2PQ58FF3 399 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 LLPHQ9BRT6 129 aaKnown RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 MED1Q15648 1581 aaPredicted RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 LIG1P18858 919 aa12.54□□□□□ -0.4
SNED1-211ENST00000491761 IMMTQ16891 758 aaKnown RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 RABL6Q3YEC7 729 aaPredicted RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
SNED1-211ENST00000491761 DYNC1I1O14576 645 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 A1BGP04217 495 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 ANO6Q4KMQ2 910 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 CYP21A2P08686 494 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 TTLL7Q6ZT98 887 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 SNRKQ9NRH2 765 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 APOBRQ0VD83 1088 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
SNED1-211ENST00000491761 CTAGE5O15320 804 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 RFX5P48382 616 aaPredicted RBP12.52□□□□□ -0.4
SNED1-211ENST00000491761 ZNF165P49910 485 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 NAP1L1P55209 391 aaKnown RBP12.52□□□□□ -0.4
SNED1-211ENST00000491761 DSCC1Q9BVC3 393 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.4
SNED1-211ENST00000491761 GPR108Q9NPR9 543 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 A0A1B0GUL7 405 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 CAVIN2O95810 425 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 CLSTN2Q9H4D0 955 aa12.52□□□□□ -0.4
SNED1-211ENST00000491761 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
SNED1-211ENST00000491761 H7C1W4 665 aa12.52□□□□□ -0.41
SNED1-211ENST00000491761 IFIT5Q13325 482 aaKnown RBP12.52□□□□□ -0.41
SNED1-211ENST00000491761 STK38Q15208 465 aa12.52□□□□□ -0.41
SNED1-211ENST00000491761 ZNF594Q96JF6 807 aaPredicted RBP12.52□□□□□ -0.41
SNED1-211ENST00000491761 KDM6AO15550 1401 aaPredicted RBP12.52□□□□□ -0.41
SNED1-211ENST00000491761 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
SNED1-211ENST00000491761 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
SNED1-211ENST00000491761 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.41
SNED1-211ENST00000491761 PRIMPOLQ96LW4 560 aa12.52□□□□□ -0.41
SNED1-211ENST00000491761 ZFYP08048 801 aaPredicted RBP12.51□□□□□ -0.41
SNED1-211ENST00000491761 CCAR1Q8IX12 1150 aaKnown RBP12.51□□□□□ -0.41
SNED1-211ENST00000491761 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.51□□□□□ -0.41
SNED1-211ENST00000491761 SLIT3O75094 1523 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 SERPINC1P01008 464 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 IL2RBP14784 551 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 LUZP1Q86V48 1076 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
SNED1-211ENST00000491761 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
SNED1-211ENST00000491761 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 SH3TC1Q8TE82 1336 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 PFKFB2O60825 505 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 STARD3NLO95772 234 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 ST3GAL1Q11201 340 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNED1-211ENST00000491761 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 TMX1Q9H3N1 280 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 CNNM1Q9NRU3 951 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
SNED1-211ENST00000491761 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
SNED1-211ENST00000491761 ERICH2A1L162 156 aa12.5□□□□□ -0.41
SNED1-211ENST00000491761 METTL24Q5JXM2 366 aa12.5□□□□□ -0.41
SNED1-211ENST00000491761 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
SNED1-211ENST00000491761 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
SNED1-211ENST00000491761 CHD2O14647 1828 aaKnown RBP12.5□□□□□ -0.41
SNED1-211ENST00000491761 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
SNED1-211ENST00000491761 CCDC66A2RUB6 948 aa12.5□□□□□ -0.41
SNED1-211ENST00000491761 RRP12Q5JTH9 1297 aaKnown RBP12.5□□□□□ -0.41
SNED1-211ENST00000491761 ZMYM1Q5SVZ6 1142 aa12.5□□□□□ -0.41
SNED1-211ENST00000491761 HAND2P61296 217 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 SCRN1Q12765 414 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 LRRC24Q50LG9 513 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 DNAJC25Q9H1X3 360 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 USP54Q70EL1 1684 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 E7EWF7 191 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 C8orf76Q96K31 380 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 CBX8Q9HC52 389 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 TBC1D2BQ9UPU7 963 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 ATL3Q6DD88 541 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 FSIP1Q8NA03 581 aa12.49□□□□□ -0.41
SNED1-211ENST00000491761 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
SNED1-211ENST00000491761 MEGF6O75095 1541 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 POLR3GO15318 223 aaPredicted RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 HSPD1P10809 573 aaKnown RBP12.48□□□□□ -0.41
SNED1-211ENST00000491761 STX1AQ16623 288 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
SNED1-211ENST00000491761 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms