RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PRPF38BQ5VTL8 546 aaKnown RBP17.15■□□□□ 0.34
USF1-206ENST00000491629 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
USF1-206ENST00000491629 C8orf58Q8NAV2 365 aa17.15■□□□□ 0.34
USF1-206ENST00000491629 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
USF1-206ENST00000491629 CWC25Q9NXE8 425 aaPredicted RBP17.15■□□□□ 0.34
USF1-206ENST00000491629 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
USF1-206ENST00000491629 WNT10BO00744 389 aa17.14■□□□□ 0.33
USF1-206ENST00000491629 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
USF1-206ENST00000491629 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
USF1-206ENST00000491629 KIAA0100Q14667 2235 aaKnown RBP17.14■□□□□ 0.33
USF1-206ENST00000491629 MKRN3Q13064 507 aaKnown RBP17.13■□□□□ 0.33
USF1-206ENST00000491629 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
USF1-206ENST00000491629 GPR25O00155 361 aa17.12■□□□□ 0.33
USF1-206ENST00000491629 SASH1O94885 1247 aa17.12■□□□□ 0.33
USF1-206ENST00000491629 CTSWP56202 376 aa17.12■□□□□ 0.33
USF1-206ENST00000491629 PTPN12Q05209 780 aaKnown RBP17.12■□□□□ 0.33
USF1-206ENST00000491629 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
USF1-206ENST00000491629 GREM2Q9H772 168 aa17.12■□□□□ 0.33
USF1-206ENST00000491629 RBBP6Q7Z6E9 1792 aaKnown RBP17.11■□□□□ 0.33
USF1-206ENST00000491629 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
USF1-206ENST00000491629 KLRK1P26718 216 aa17.11■□□□□ 0.33
USF1-206ENST00000491629 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
USF1-206ENST00000491629 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
USF1-206ENST00000491629 PKN2Q16513 984 aaKnown RBP17.11■□□□□ 0.33
USF1-206ENST00000491629 NOM1Q5C9Z4 860 aaKnown RBP17.11■□□□□ 0.33
USF1-206ENST00000491629 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
USF1-206ENST00000491629 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
USF1-206ENST00000491629 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
USF1-206ENST00000491629 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
USF1-206ENST00000491629 FZD1Q9UP38 647 aa17.11■□□□□ 0.33
USF1-206ENST00000491629 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
USF1-206ENST00000491629 APAF1O14727 1248 aa17.1■□□□□ 0.33
USF1-206ENST00000491629 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
USF1-206ENST00000491629 CFHR5Q9BXR6 569 aa17.1■□□□□ 0.33
USF1-206ENST00000491629 OTOFQ9HC10 1997 aa17.09■□□□□ 0.33
USF1-206ENST00000491629 PRKG1Q13976 671 aa17.09■□□□□ 0.33
USF1-206ENST00000491629 TTLL12Q14166 644 aaPredicted RBP17.09■□□□□ 0.33
USF1-206ENST00000491629 LDLRAD1Q5T700 205 aa17.09■□□□□ 0.33
USF1-206ENST00000491629 STRIP1Q5VSL9 837 aa17.09■□□□□ 0.33
USF1-206ENST00000491629 CDC5LQ99459 802 aaKnown RBP17.09■□□□□ 0.33
USF1-206ENST00000491629 SSC5DA1L4H1 1573 aa17.09■□□□□ 0.33
USF1-206ENST00000491629 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
USF1-206ENST00000491629 PI4KAP2A4QPH2 592 aa17.08■□□□□ 0.32
USF1-206ENST00000491629 GNAI1P63096 354 aa17.08■□□□□ 0.32
USF1-206ENST00000491629 CWF19L2Q2TBE0 894 aaKnown RBP17.08■□□□□ 0.32
USF1-206ENST00000491629 FBXO46Q6PJ61 603 aaPredicted RBP17.08■□□□□ 0.32
USF1-206ENST00000491629 PI4KAP1Q8N8J0 262 aa17.08■□□□□ 0.32
USF1-206ENST00000491629 COA1Q9GZY4 146 aa17.08■□□□□ 0.32
USF1-206ENST00000491629 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
USF1-206ENST00000491629 FBXW7Q969H0 707 aa17.07■□□□□ 0.32
USF1-206ENST00000491629 PCDHAC2Q9Y5I4 1007 aa17.07■□□□□ 0.32
USF1-206ENST00000491629 MYO3BQ8WXR4 1341 aa17.06■□□□□ 0.32
USF1-206ENST00000491629 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
USF1-206ENST00000491629 FKTNO75072 461 aa17.06■□□□□ 0.32
USF1-206ENST00000491629 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
USF1-206ENST00000491629 G2E3Q7L622 706 aa17.06■□□□□ 0.32
USF1-206ENST00000491629 KIAA0825Q8IV33 1275 aa17.06■□□□□ 0.32
USF1-206ENST00000491629 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
USF1-206ENST00000491629 AOX1Q06278 1338 aa17.05■□□□□ 0.32
USF1-206ENST00000491629 NEURL1BA8MQ27 555 aa17.05■□□□□ 0.32
USF1-206ENST00000491629 H7C1W4 665 aa17.05■□□□□ 0.32
USF1-206ENST00000491629 SNAP23O00161 211 aa17.05■□□□□ 0.32
USF1-206ENST00000491629 DDX58O95786 925 aaKnown RBP17.05■□□□□ 0.32
USF1-206ENST00000491629 CCDC30Q5VVM6 783 aa17.05■□□□□ 0.32
USF1-206ENST00000491629 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
USF1-206ENST00000491629 CERS5Q8N5B7 392 aa17.05■□□□□ 0.32
USF1-206ENST00000491629 CEP290O15078 2479 aa17.04■□□□□ 0.32
USF1-206ENST00000491629 CASP7P55210 303 aa17.04■□□□□ 0.32
USF1-206ENST00000491629 CAP1Q01518 475 aa17.04■□□□□ 0.32
USF1-206ENST00000491629 SREBF2Q12772 1141 aa17.04■□□□□ 0.32
USF1-206ENST00000491629 CLMNQ96JQ2 1002 aa17.04■□□□□ 0.32
USF1-206ENST00000491629 ANGEL1Q9UNK9 670 aaKnown RBP17.04■□□□□ 0.32
USF1-206ENST00000491629 LEMD3Q9Y2U8 911 aa17.04■□□□□ 0.32
USF1-206ENST00000491629 ZNF804BA4D1E1 1349 aa17.03■□□□□ 0.32
USF1-206ENST00000491629 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
USF1-206ENST00000491629 NF2P35240 595 aa17.03■□□□□ 0.32
USF1-206ENST00000491629 GTF2IP78347 998 aa17.03■□□□□ 0.32
USF1-206ENST00000491629 ARMC9Q7Z3E5 817 aa17.03■□□□□ 0.32
USF1-206ENST00000491629 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
USF1-206ENST00000491629 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
USF1-206ENST00000491629 POTEFA5A3E0 1075 aa17.02■□□□□ 0.32
USF1-206ENST00000491629 ITGA6P23229 1130 aa17.02■□□□□ 0.32
USF1-206ENST00000491629 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
USF1-206ENST00000491629 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.32
USF1-206ENST00000491629 PLA2G12BQ9BX93 195 aa17.02■□□□□ 0.32
USF1-206ENST00000491629 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.32
USF1-206ENST00000491629 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
USF1-206ENST00000491629 CSF1RP07333 972 aa17.01■□□□□ 0.31
USF1-206ENST00000491629 GJA5P36382 358 aa17.01■□□□□ 0.31
USF1-206ENST00000491629 MMP14P50281 582 aa17.01■□□□□ 0.31
USF1-206ENST00000491629 OTOP1Q7RTM1 612 aa17.01■□□□□ 0.31
USF1-206ENST00000491629 IFNL1Q8IU54 200 aa17.01■□□□□ 0.31
USF1-206ENST00000491629 PRKRIP1Q9H875 184 aaPredicted RBP17.01■□□□□ 0.31
USF1-206ENST00000491629 CD209Q9NNX6 404 aa17.01■□□□□ 0.31
USF1-206ENST00000491629 ZSWIM8A7E2V4 1837 aa17■□□□□ 0.31
USF1-206ENST00000491629 CHRNDQ07001 517 aa17■□□□□ 0.31
USF1-206ENST00000491629 GCKRQ14397 625 aa17■□□□□ 0.31
USF1-206ENST00000491629 MTMR14Q8NCE2 650 aa17■□□□□ 0.31
USF1-206ENST00000491629 WNK4Q96J92 1243 aa17■□□□□ 0.31
USF1-206ENST00000491629 SZT2Q5T011 3432 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms