RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	DACT2	Q5SW24	774 aa		24.96	■■□□□ 1.59
CDK5RAP2-218	ENST00000491334	LDLRAD1	Q5T700	205 aa		24.96	■■□□□ 1.59
CDK5RAP2-218	ENST00000491334	STRIP1	Q5VSL9	837 aa		24.96	■■□□□ 1.59
CDK5RAP2-218	ENST00000491334	DUSP27	Q5VZP5	1158 aa		24.96	■■□□□ 1.59
CDK5RAP2-218	ENST00000491334	MANSC4	A6NHS7	340 aa	Predicted RBP	24.95	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	APOBEC3F	Q8IUX4	373 aa	Known RBP	24.95	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	SLC10A4	Q96EP9	437 aa		24.95	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	CDC5L	Q99459	802 aa	Known RBP	24.95	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	MYD88	Q99836	296 aa		24.95	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	FBXW7	Q969H0	707 aa		24.94	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	MXD3	Q9BW11	206 aa		24.94	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	ANGEL1	Q9UNK9	670 aa	Known RBP	24.94	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	POTEF	A5A3E0	1075 aa		24.93	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	OTOP1	Q7RTM1	612 aa		24.93	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	COA1	Q9GZY4	146 aa		24.93	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	CWC25	Q9NXE8	425 aa	Predicted RBP	24.93	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	PSME4	Q14997	1843 aa		24.92	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	IFNL1	Q8IU54	200 aa		24.92	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	JARID2	Q92833	1246 aa	Predicted RBP	24.92	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	BSDC1	Q9NW68	430 aa	Predicted RBP	24.92	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	TRIM35	Q9UPQ4	493 aa		24.92	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	MED23	Q9ULK4	1368 aa		24.92	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	WTIP	A6NIX2	430 aa	Predicted RBP	24.91	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	PHAX	Q9H814	394 aa	Known RBP	24.91	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	MINPP1	Q9UNW1	487 aa		24.91	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	SASH1	O94885	1247 aa		24.9	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	TTLL5	Q6EMB2	1281 aa		24.9	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	CCDC146	Q8IYE0	955 aa		24.9	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	ERO1A	Q96HE7	468 aa		24.9	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	KIAA0100	Q14667	2235 aa	Known RBP	24.89	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	CCT4	P50991	539 aa	Known RBP	24.89	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	PTPN22	Q9Y2R2	807 aa		24.89	■■□□□ 1.58
CDK5RAP2-218	ENST00000491334	MKI67	P46013	3256 aa	Known RBP	24.89	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	ZBTB48	P10074	688 aa	Predicted RBP	24.88	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	OTUD7B	Q6GQQ9	843 aa		24.88	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	RUNDC1	Q96C34	613 aa		24.88	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	PPP1R12B	O60237	982 aa	Predicted RBP	24.87	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	CTSW	P56202	376 aa		24.87	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	METTL22	Q9BUU2	404 aa	Predicted RBP	24.87	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	DEFB129	Q9H1M3	183 aa		24.87	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	24.87	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	LEMD3	Q9Y2U8	911 aa		24.87	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	UNCX	A6NJT0	531 aa		24.86	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	DDX58	O95786	925 aa	Known RBP	24.86	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	RALBP1	Q15311	655 aa		24.86	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	MAP3K11	Q16584	847 aa		24.86	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	KIAA0825	Q8IV33	1275 aa		24.86	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	EN2	P19622	333 aa	Predicted RBP	24.85	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	FXR1	P51114	621 aa	Known RBP eCLIP	24.85	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	TTLL11	Q8NHH1	800 aa		24.85	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	ZBED3	Q96IU2	234 aa	Predicted RBP	24.85	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	EFCC1	Q9HA90	598 aa		24.85	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	MBIP	Q9NS73	344 aa		24.85	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	IGF2BP3	O00425	579 aa	Known RBP eCLIP	24.84	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	ARMC5	Q96C12	935 aa		24.84	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	WNK4	Q96J92	1243 aa		24.84	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	TMEM106C	Q9BVX2	250 aa		24.84	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	CHMP4A	Q9BY43	222 aa		24.84	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	FZD1	Q9UP38	647 aa		24.84	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	DLGAP5	Q15398	846 aa		24.83	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	SUPT20HL1	Q3ZLR7	823 aa		24.83	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	TXNRD3	Q86VQ6	643 aa		24.83	■■□□□ 1.57
CDK5RAP2-218	ENST00000491334	HTT	P42858	3142 aa		24.83	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	GTF2I	P78347	998 aa		24.82	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	CD99L2	Q8TCZ2	262 aa		24.82	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	CLMN	Q96JQ2	1002 aa		24.82	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	GREM2	Q9H772	168 aa		24.82	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	PPP2R3B	Q9Y5P8	575 aa		24.82	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	ELL2	O00472	640 aa	Predicted RBP	24.81	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	IGHMBP2	P38935	993 aa	Known RBP	24.81	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	SP3	Q02447	781 aa		24.81	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	ANKRD2	Q9GZV1	360 aa		24.81	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	COL1A1	P02452	1464 aa	Predicted RBP	24.81	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	CRHR2	Q13324	411 aa		24.8	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	ARHGEF6	Q15052	776 aa		24.8	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	ZNF804B	A4D1E1	1349 aa		24.8	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	WDR43	Q15061	677 aa	Known RBP eCLIP	24.79	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	NBPF11	Q86T75	865 aa		24.79	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	MAP3K2	Q9Y2U5	619 aa		24.79	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	CENPF	P49454	3210 aa		24.79	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	MYO1B	O43795	1136 aa		24.78	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	ZNF853	P0CG23	659 aa		24.78	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	IREB2	P48200	963 aa	Known RBP	24.78	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	MTMR14	Q8NCE2	650 aa		24.78	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	NEXN	Q0ZGT2	675 aa		24.77	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	CCDC30	Q5VVM6	783 aa		24.77	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	COLQ	Q9Y215	455 aa	Predicted RBP	24.77	■■□□□ 1.56
CDK5RAP2-218	ENST00000491334	KCNJ4	P48050	445 aa		24.76	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	GNAI1	P63096	354 aa		24.76	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	KSR2	Q6VAB6	950 aa		24.76	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	MPHOSPH8	Q99549	860 aa		24.76	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	TESPA1	A2RU30	521 aa	Predicted RBP	24.75	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	IGKV5-2	P06315	115 aa		24.75	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	CALD1	Q05682	793 aa	Known RBP	24.75	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	ANKRD13A	Q8IZ07	590 aa		24.75	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	CD209	Q9NNX6	404 aa		24.75	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	IFT57	Q9NWB7	429 aa		24.75	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	USP2	O75604	605 aa	Predicted RBP	24.74	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	ZNF333	Q96JL9	665 aa		24.74	■■□□□ 1.55
CDK5RAP2-218	ENST00000491334	PTPN18	Q99952	460 aa		24.74	■■□□□ 1.55

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms