RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 KAZALD1Q96I82 304 aa16.88■□□□□ 0.29
DNMT3A-214ENST00000491288 EYA3Q99504 573 aa16.88■□□□□ 0.29
DNMT3A-214ENST00000491288 LRRFIP2Q9Y608 721 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-214ENST00000491288 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 RAD17O75943 681 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 HSPA8P11142 646 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 LBX1P52954 281 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 WASHC4Q2M389 1173 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 DPF2Q92785 391 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 HHIPL1Q96JK4 782 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 CAPNS2Q96L46 248 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 ZC3H12CQ9C0D7 883 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 GGA1Q9UJY5 639 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 THSD7BQ9C0I4 1608 aa16.87■□□□□ 0.29
DNMT3A-214ENST00000491288 ATP2B4P23634 1241 aa16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 ECE1P42892 770 aa16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 PDE3AQ14432 1141 aa16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 ANKRD44Q8N8A2 993 aa16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 POLLQ9UGP5 575 aa16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 XDHP47989 1333 aa16.86■□□□□ 0.29
DNMT3A-214ENST00000491288 RLBP1P12271 317 aa16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 MAP2K2P36507 400 aa16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 KCNJ4P48050 445 aa16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 TBC1D16Q8TBP0 767 aa16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 TRPM4Q8TD43 1214 aa16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 CNOT7Q9UIV1 285 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 DDX19BQ9UMR2 479 aa16.85■□□□□ 0.29
DNMT3A-214ENST00000491288 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 ZBTB7BO15156 539 aaPredicted RBP16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 UFL1O94874 794 aa16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 CYP4F22Q6NT55 531 aa16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 CDC37L1Q7L3B6 337 aa16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 GLIS2Q9BZE0 524 aaPredicted RBP16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 LEMD3Q9Y2U8 911 aa16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 COL4A1P02462 1669 aa16.84■□□□□ 0.29
DNMT3A-214ENST00000491288 SHTN1A0MZ66 631 aa16.83■□□□□ 0.28
DNMT3A-214ENST00000491288 CELF2O95319 508 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-214ENST00000491288 CHRNDQ07001 517 aa16.83■□□□□ 0.28
DNMT3A-214ENST00000491288 MVPQ14764 893 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-214ENST00000491288 H7C1D1 291 aa16.82■□□□□ 0.28
DNMT3A-214ENST00000491288 PSMD14O00487 310 aa16.82■□□□□ 0.28
DNMT3A-214ENST00000491288 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
DNMT3A-214ENST00000491288 MICALL2Q8IY33 904 aa16.82■□□□□ 0.28
DNMT3A-214ENST00000491288 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
DNMT3A-214ENST00000491288 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
DNMT3A-214ENST00000491288 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
DNMT3A-214ENST00000491288 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
DNMT3A-214ENST00000491288 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
DNMT3A-214ENST00000491288 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
DNMT3A-214ENST00000491288 TAF5LO75529 589 aa16.8■□□□□ 0.28
DNMT3A-214ENST00000491288 METTL24Q5JXM2 366 aa16.8■□□□□ 0.28
DNMT3A-214ENST00000491288 KCNQ5Q9NR82 932 aa16.8■□□□□ 0.28
DNMT3A-214ENST00000491288 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
DNMT3A-214ENST00000491288 SPEF2Q9C093 1822 aa16.8■□□□□ 0.28
DNMT3A-214ENST00000491288 ZNF609O15014 1411 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 EYA2O00167 538 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 ECE2O60344 883 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 EGFRP00533 1210 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 VIL1P09327 827 aaKnown RBP16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 RRP1P56182 461 aaKnown RBP16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 ATP8B2P98198 1209 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 PTPN12Q05209 780 aaKnown RBP16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 SAMD7Q7Z3H4 446 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 KLHDC4Q8TBB5 520 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 PUS3Q9BZE2 481 aaKnown RBP16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 RIPOR2Q9Y4F9 1068 aa16.79■□□□□ 0.28
DNMT3A-214ENST00000491288 AOC2O75106 756 aa16.78■□□□□ 0.28
DNMT3A-214ENST00000491288 RFX5P48382 616 aaPredicted RBP16.78■□□□□ 0.28
DNMT3A-214ENST00000491288 MTX1Q13505 466 aa16.78■□□□□ 0.28
DNMT3A-214ENST00000491288 DOK7Q18PE1 504 aa16.78■□□□□ 0.28
DNMT3A-214ENST00000491288 LRRC24Q50LG9 513 aa16.78■□□□□ 0.28
DNMT3A-214ENST00000491288 SIL1Q9H173 461 aa16.78■□□□□ 0.28
DNMT3A-214ENST00000491288 CA12O43570 354 aa16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 G3BP1Q13283 466 aaKnown RBP eCLIP16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 PAXIP1Q6ZW49 1069 aaPredicted RBP16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 USP48Q86UV5 1035 aa16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 COPRSQ9NQ92 184 aa16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 CEP126Q9P2H0 1117 aa16.77■□□□□ 0.28
DNMT3A-214ENST00000491288 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
DNMT3A-214ENST00000491288 CIAO1O76071 339 aa16.76■□□□□ 0.27
DNMT3A-214ENST00000491288 PDE8BO95263 885 aa16.76■□□□□ 0.27
DNMT3A-214ENST00000491288 IL15P40933 162 aaPredicted RBP16.76■□□□□ 0.27
DNMT3A-214ENST00000491288 TBC1D10BQ4KMP7 808 aaPredicted RBP16.76■□□□□ 0.27
DNMT3A-214ENST00000491288 ABHD8Q96I13 439 aa16.76■□□□□ 0.27
DNMT3A-214ENST00000491288 BEGAINQ9BUH8 593 aa16.76■□□□□ 0.27
DNMT3A-214ENST00000491288 ZNF280AP59817 542 aaPredicted RBP16.75■□□□□ 0.27
DNMT3A-214ENST00000491288 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
DNMT3A-214ENST00000491288 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
DNMT3A-214ENST00000491288 PODNQ7Z5L7 613 aa16.75■□□□□ 0.27
DNMT3A-214ENST00000491288 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
DNMT3A-214ENST00000491288 ZBTB40Q9NUA8 1239 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms