RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 CWC25Q9NXE8 425 aaPredicted RBP19.86■□□□□ 0.77
SCAMP3-208ENST00000490999 WNT10BO00744 389 aa19.85■□□□□ 0.77
SCAMP3-208ENST00000490999 PTPN12Q05209 780 aaKnown RBP19.85■□□□□ 0.77
SCAMP3-208ENST00000490999 PODNQ7Z5L7 613 aa19.85■□□□□ 0.77
SCAMP3-208ENST00000490999 RUNDC1Q96C34 613 aa19.85■□□□□ 0.77
SCAMP3-208ENST00000490999 SPEF2Q9C093 1822 aa19.85■□□□□ 0.77
SCAMP3-208ENST00000490999 TM4SF4P48230 202 aa19.84■□□□□ 0.77
SCAMP3-208ENST00000490999 CTSWP56202 376 aa19.84■□□□□ 0.77
SCAMP3-208ENST00000490999 CCDC191Q8NCU4 936 aa19.84■□□□□ 0.77
SCAMP3-208ENST00000490999 FKTNO75072 461 aa19.83■□□□□ 0.77
SCAMP3-208ENST00000490999 HSP90B1P14625 803 aaKnown RBP19.83■□□□□ 0.77
SCAMP3-208ENST00000490999 KLRK1P26718 216 aa19.83■□□□□ 0.77
SCAMP3-208ENST00000490999 NF2P35240 595 aa19.83■□□□□ 0.77
SCAMP3-208ENST00000490999 SREBF2Q12772 1141 aa19.83■□□□□ 0.77
SCAMP3-208ENST00000490999 RALBP1Q15311 655 aa19.83■□□□□ 0.77
SCAMP3-208ENST00000490999 WDR43Q15061 677 aaKnown RBP eCLIP19.82■□□□□ 0.76
SCAMP3-208ENST00000490999 TXNRD3Q86VQ6 643 aa19.82■□□□□ 0.76
SCAMP3-208ENST00000490999 OGFOD1Q8N543 542 aa19.82■□□□□ 0.76
SCAMP3-208ENST00000490999 GREM2Q9H772 168 aa19.82■□□□□ 0.76
SCAMP3-208ENST00000490999 KIAA0825Q8IV33 1275 aa19.81■□□□□ 0.76
SCAMP3-208ENST00000490999 CDC5LQ99459 802 aaKnown RBP19.81■□□□□ 0.76
SCAMP3-208ENST00000490999 MINPP1Q9UNW1 487 aa19.81■□□□□ 0.76
SCAMP3-208ENST00000490999 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
SCAMP3-208ENST00000490999 SSC5DA1L4H1 1573 aa19.8■□□□□ 0.76
SCAMP3-208ENST00000490999 NOM1Q5C9Z4 860 aaKnown RBP19.8■□□□□ 0.76
SCAMP3-208ENST00000490999 SPRYD7Q5W111 196 aa19.8■□□□□ 0.76
SCAMP3-208ENST00000490999 METTL22Q9BUU2 404 aaPredicted RBP19.8■□□□□ 0.76
SCAMP3-208ENST00000490999 ANGEL1Q9UNK9 670 aaKnown RBP19.8■□□□□ 0.76
SCAMP3-208ENST00000490999 POTEFA5A3E0 1075 aa19.79■□□□□ 0.76
SCAMP3-208ENST00000490999 CCT4P50991 539 aaKnown RBP19.79■□□□□ 0.76
SCAMP3-208ENST00000490999 ARMC9Q7Z3E5 817 aa19.79■□□□□ 0.76
SCAMP3-208ENST00000490999 ADAMTS8Q9UP79 889 aa19.79■□□□□ 0.76
SCAMP3-208ENST00000490999 MAP3K2Q9Y2U5 619 aa19.79■□□□□ 0.76
SCAMP3-208ENST00000490999 TRIM17Q9Y577 477 aa19.79■□□□□ 0.76
SCAMP3-208ENST00000490999 MYO3BQ8WXR4 1341 aa19.78■□□□□ 0.76
SCAMP3-208ENST00000490999 ZNF853P0CG23 659 aa19.78■□□□□ 0.76
SCAMP3-208ENST00000490999 STRIP1Q5VSL9 837 aa19.78■□□□□ 0.76
SCAMP3-208ENST00000490999 APOBEC3FQ8IUX4 373 aaKnown RBP19.78■□□□□ 0.76
SCAMP3-208ENST00000490999 TTLL11Q8NHH1 800 aa19.78■□□□□ 0.76
SCAMP3-208ENST00000490999 CFHR5Q9BXR6 569 aa19.78■□□□□ 0.76
SCAMP3-208ENST00000490999 BSDC1Q9NW68 430 aaPredicted RBP19.78■□□□□ 0.76
SCAMP3-208ENST00000490999 IGKV5-2P06315 115 aa19.77■□□□□ 0.76
SCAMP3-208ENST00000490999 C8orf58Q8NAV2 365 aa19.77■□□□□ 0.76
SCAMP3-208ENST00000490999 CLMNQ96JQ2 1002 aa19.77■□□□□ 0.76
SCAMP3-208ENST00000490999 COA1Q9GZY4 146 aa19.77■□□□□ 0.76
SCAMP3-208ENST00000490999 IGF2BP3O00425 579 aaKnown RBP eCLIP19.76■□□□□ 0.75
SCAMP3-208ENST00000490999 CWF19L2Q2TBE0 894 aaKnown RBP19.76■□□□□ 0.75
SCAMP3-208ENST00000490999 LDLRAD1Q5T700 205 aa19.76■□□□□ 0.75
SCAMP3-208ENST00000490999 OTOP1Q7RTM1 612 aa19.76■□□□□ 0.75
SCAMP3-208ENST00000490999 PCDHAC2Q9Y5I4 1007 aa19.76■□□□□ 0.75
SCAMP3-208ENST00000490999 DDX58O95786 925 aaKnown RBP19.75■□□□□ 0.75
SCAMP3-208ENST00000490999 GTF2IP78347 998 aa19.75■□□□□ 0.75
SCAMP3-208ENST00000490999 HABP4Q5JVS0 413 aaKnown RBP19.75■□□□□ 0.75
SCAMP3-208ENST00000490999 IFNL1Q8IU54 200 aa19.75■□□□□ 0.75
SCAMP3-208ENST00000490999 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
SCAMP3-208ENST00000490999 TTLL5Q6EMB2 1281 aa19.74■□□□□ 0.75
SCAMP3-208ENST00000490999 UBE3BQ7Z3V4 1068 aa19.74■□□□□ 0.75
SCAMP3-208ENST00000490999 GCC1Q96CN9 775 aa19.74■□□□□ 0.75
SCAMP3-208ENST00000490999 ZBED3Q96IU2 234 aaPredicted RBP19.74■□□□□ 0.75
SCAMP3-208ENST00000490999 ZNF804BA4D1E1 1349 aa19.74■□□□□ 0.75
SCAMP3-208ENST00000490999 COL1A1P02452 1464 aaPredicted RBP19.73■□□□□ 0.75
SCAMP3-208ENST00000490999 PI4KAP2A4QPH2 592 aa19.73■□□□□ 0.75
SCAMP3-208ENST00000490999 ALDH1A1P00352 501 aa19.73■□□□□ 0.75
SCAMP3-208ENST00000490999 PI4KAP1Q8N8J0 262 aa19.73■□□□□ 0.75
SCAMP3-208ENST00000490999 WNK4Q96J92 1243 aa19.73■□□□□ 0.75
SCAMP3-208ENST00000490999 DEFB129Q9H1M3 183 aa19.73■□□□□ 0.75
SCAMP3-208ENST00000490999 AOX1Q06278 1338 aa19.73■□□□□ 0.75
SCAMP3-208ENST00000490999 CLRN2A0PK11 232 aa19.72■□□□□ 0.75
SCAMP3-208ENST00000490999 MANSC4A6NHS7 340 aaPredicted RBP19.72■□□□□ 0.75
SCAMP3-208ENST00000490999 IGHMBP2P38935 993 aaKnown RBP19.72■□□□□ 0.75
SCAMP3-208ENST00000490999 GNAI1P63096 354 aa19.72■□□□□ 0.75
SCAMP3-208ENST00000490999 CERS5Q8N5B7 392 aa19.72■□□□□ 0.75
SCAMP3-208ENST00000490999 TSPYL6Q8N831 410 aa19.72■□□□□ 0.75
SCAMP3-208ENST00000490999 CD99L2Q8TCZ2 262 aa19.72■□□□□ 0.75
SCAMP3-208ENST00000490999 F8W031 263 aaPredicted RBP19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 SNAP23O00161 211 aa19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 APAF1O14727 1248 aa19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 CAP1Q01518 475 aa19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 CRHR2Q13324 411 aa19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 SLC10A4Q96EP9 437 aa19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 JAG2Q9Y219 1238 aa19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 LEMD3Q9Y2U8 911 aa19.71■□□□□ 0.75
SCAMP3-208ENST00000490999 MYH3P11055 1940 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 NEURL1BA8MQ27 555 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 ITGA6P23229 1130 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 GJA5P36382 358 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 KCNJ4P48050 445 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 DLGAP5Q15398 846 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 CCDC30Q5VVM6 783 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 KSR2Q6VAB6 950 aa19.7■□□□□ 0.74
SCAMP3-208ENST00000490999 ZBTB48P10074 688 aaPredicted RBP19.69■□□□□ 0.74
SCAMP3-208ENST00000490999 EN2P19622 333 aaPredicted RBP19.69■□□□□ 0.74
SCAMP3-208ENST00000490999 VEZTQ9HBM0 779 aa19.69■□□□□ 0.74
SCAMP3-208ENST00000490999 PTPN22Q9Y2R2 807 aa19.69■□□□□ 0.74
SCAMP3-208ENST00000490999 CHRNDQ07001 517 aa19.68■□□□□ 0.74
SCAMP3-208ENST00000490999 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
SCAMP3-208ENST00000490999 DDX10Q13206 875 aaKnown RBP19.68■□□□□ 0.74
SCAMP3-208ENST00000490999 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
SCAMP3-208ENST00000490999 MAP3K11Q16584 847 aa19.67■□□□□ 0.74
SCAMP3-208ENST00000490999 NBPF12Q5TAG4 269 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms