RNA–Protein interactions for RNA: ENST00000490705.1

ARF1-211, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 881 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-211ENST00000490705 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
ARF1-211ENST00000490705 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
ARF1-211ENST00000490705 HTRA3P83110 453 aa16.76■□□□□ 0.27
ARF1-211ENST00000490705 FBXW7Q969H0 707 aa16.76■□□□□ 0.27
ARF1-211ENST00000490705 USP17L3A6NCW0 530 aa16.75■□□□□ 0.27
ARF1-211ENST00000490705 USP17L4A6NCW7 530 aa16.75■□□□□ 0.27
ARF1-211ENST00000490705 RSBN1LQ6PCB5 846 aaPredicted RBP16.75■□□□□ 0.27
ARF1-211ENST00000490705 USP17L1Q7RTZ2 530 aa16.75■□□□□ 0.27
ARF1-211ENST00000490705 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
ARF1-211ENST00000490705 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
ARF1-211ENST00000490705 TRPM4Q8TD43 1214 aa16.75■□□□□ 0.27
ARF1-211ENST00000490705 LRRFIP2Q9Y608 721 aaKnown RBP16.75■□□□□ 0.27
ARF1-211ENST00000490705 MROH5Q6ZUA9 1318 aa16.74■□□□□ 0.27
ARF1-211ENST00000490705 GNAI3P08754 354 aa16.74■□□□□ 0.27
ARF1-211ENST00000490705 LRRC24Q50LG9 513 aa16.74■□□□□ 0.27
ARF1-211ENST00000490705 AGBL3Q8NEM8 1001 aa16.74■□□□□ 0.27
ARF1-211ENST00000490705 RIPOR2Q9Y4F9 1068 aa16.74■□□□□ 0.27
ARF1-211ENST00000490705 PASKQ96RG2 1323 aa16.73■□□□□ 0.27
ARF1-211ENST00000490705 IRS2Q9Y4H2 1338 aa16.73■□□□□ 0.27
ARF1-211ENST00000490705 ZNF646O15015 1829 aaPredicted RBP16.73■□□□□ 0.27
ARF1-211ENST00000490705 ZNF609O15014 1411 aa16.73■□□□□ 0.27
ARF1-211ENST00000490705 ITGBL1O95965 494 aaPredicted RBP16.73■□□□□ 0.27
ARF1-211ENST00000490705 TBC1D10BQ4KMP7 808 aaPredicted RBP16.73■□□□□ 0.27
ARF1-211ENST00000490705 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
ARF1-211ENST00000490705 C15orf52Q6ZUT6 534 aaKnown RBP16.73■□□□□ 0.27
ARF1-211ENST00000490705 ZNF804AQ7Z570 1209 aa16.73■□□□□ 0.27
ARF1-211ENST00000490705 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
ARF1-211ENST00000490705 RFX5P48382 616 aaPredicted RBP16.72■□□□□ 0.27
ARF1-211ENST00000490705 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
ARF1-211ENST00000490705 UBE4AQ14139 1066 aa16.72■□□□□ 0.27
ARF1-211ENST00000490705 STRIP1Q5VSL9 837 aa16.72■□□□□ 0.27
ARF1-211ENST00000490705 SAMD7Q7Z3H4 446 aa16.72■□□□□ 0.27
ARF1-211ENST00000490705 TMEM57Q8N5G2 664 aa16.72■□□□□ 0.27
ARF1-211ENST00000490705 CD209Q9NNX6 404 aa16.72■□□□□ 0.27
ARF1-211ENST00000490705 PTPN12Q05209 780 aaKnown RBP16.71■□□□□ 0.27
ARF1-211ENST00000490705 DACT2Q5SW24 774 aa16.71■□□□□ 0.27
ARF1-211ENST00000490705 RBM26Q5T8P6 1007 aaKnown RBP16.71■□□□□ 0.27
ARF1-211ENST00000490705 MYO3BQ8WXR4 1341 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 EYA2O00167 538 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 EGFRP00533 1210 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 GTF2IP78347 998 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 KIF4BQ2VIQ3 1234 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
ARF1-211ENST00000490705 ZC3H15Q8WU90 426 aaKnown RBP16.7■□□□□ 0.26
ARF1-211ENST00000490705 GMLQ99445 158 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 MXD3Q9BW11 206 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 SIL1Q9H173 461 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
ARF1-211ENST00000490705 PDE8BO95263 885 aa16.69■□□□□ 0.26
ARF1-211ENST00000490705 USP17L8P0C7I0 530 aa16.69■□□□□ 0.26
ARF1-211ENST00000490705 ITPRIPQ8IWB1 547 aa16.69■□□□□ 0.26
ARF1-211ENST00000490705 VGLL2Q8N8G2 317 aa16.69■□□□□ 0.26
ARF1-211ENST00000490705 TMEM88BA6NKF7 163 aa16.68■□□□□ 0.26
ARF1-211ENST00000490705 TRAF5O00463 557 aa16.68■□□□□ 0.26
ARF1-211ENST00000490705 GNAI2P04899 355 aa16.68■□□□□ 0.26
ARF1-211ENST00000490705 IL1R1P14778 569 aa16.68■□□□□ 0.26
ARF1-211ENST00000490705 GYG1P46976 350 aa16.68■□□□□ 0.26
ARF1-211ENST00000490705 ZNF280AP59817 542 aaPredicted RBP16.68■□□□□ 0.26
ARF1-211ENST00000490705 DNAJC5GQ8N7S2 189 aa16.68■□□□□ 0.26
ARF1-211ENST00000490705 GLIS2Q9BZE0 524 aaPredicted RBP16.68■□□□□ 0.26
ARF1-211ENST00000490705 PGAP2Q9UHJ9 254 aa16.68■□□□□ 0.26
ARF1-211ENST00000490705 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 RLBP1P12271 317 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 HIBADHP31937 336 aaKnown RBP16.67■□□□□ 0.26
ARF1-211ENST00000490705 FMR1Q06787 632 aaKnown RBP eCLIP16.67■□□□□ 0.265e-10■■□□□ 13.3
ARF1-211ENST00000490705 PUM3Q15397 648 aaKnown RBP16.67■□□□□ 0.26
ARF1-211ENST00000490705 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 VPS37DQ86XT2 251 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 OGFOD1Q8N543 542 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 KLRG1Q96E93 195 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
ARF1-211ENST00000490705 PA2G4Q9UQ80 394 aaKnown RBP16.67■□□□□ 0.26
ARF1-211ENST00000490705 CIAO1O76071 339 aa16.66■□□□□ 0.26
ARF1-211ENST00000490705 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
ARF1-211ENST00000490705 MTX1Q13505 466 aa16.66■□□□□ 0.26
ARF1-211ENST00000490705 CDC37L1Q7L3B6 337 aa16.66■□□□□ 0.26
ARF1-211ENST00000490705 KIAA0825Q8IV33 1275 aa16.66■□□□□ 0.26
ARF1-211ENST00000490705 FAM84BQ96KN1 310 aaPredicted RBP16.66■□□□□ 0.26
ARF1-211ENST00000490705 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
ARF1-211ENST00000490705 RCAN3Q9UKA8 241 aa16.66■□□□□ 0.26
ARF1-211ENST00000490705 JAG2Q9Y219 1238 aa16.66■□□□□ 0.26
ARF1-211ENST00000490705 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
ARF1-211ENST00000490705 DCPSQ96C86 337 aaKnown RBP16.65■□□□□ 0.26
ARF1-211ENST00000490705 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
ARF1-211ENST00000490705 HDAC9Q9UKV0 1011 aa16.65■□□□□ 0.26
ARF1-211ENST00000490705 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
ARF1-211ENST00000490705 SLC5A1P13866 664 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 FGFR2P21802 821 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
ARF1-211ENST00000490705 SCARF1Q14162 830 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 KRT26Q7Z3Y9 468 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 USP48Q86UV5 1035 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 CERS5Q8N5B7 392 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
ARF1-211ENST00000490705 PANK1Q8TE04 598 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 CEP126Q9P2H0 1117 aa16.64■□□□□ 0.25
ARF1-211ENST00000490705 MKRN1Q9UHC7 482 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms