RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 DDX60Q8IY21 1712 aaKnown RBP19.11■□□□□ 0.65
SNX5-214ENST00000490175 LAMA4Q16363 1823 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 ZAP70P43403 619 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 COL9A3Q14050 684 aaPredicted RBP19.1■□□□□ 0.65
SNX5-214ENST00000490175 SCARF1Q14162 830 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 TTF1Q15361 905 aaPredicted RBP19.1■□□□□ 0.65
SNX5-214ENST00000490175 PUM3Q15397 648 aaKnown RBP19.1■□□□□ 0.65
SNX5-214ENST00000490175 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 APPBP2Q92624 585 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 CHAMP1Q96JM3 812 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.1■□□□□ 0.653e-10■■□□□ 12.1
SNX5-214ENST00000490175 M0R2C6 588 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 RGL2O15211 777 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 OSBP2Q969R2 916 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 TCEANC2Q96MN5 208 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 CTNNA3Q9UI47 895 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 MTMR6Q9Y217 621 aa19.1■□□□□ 0.65
SNX5-214ENST00000490175 UQCRFS1P1P0C7P4 283 aa19.09■□□□□ 0.65
SNX5-214ENST00000490175 FAM98CQ17RN3 349 aaKnown RBP19.09■□□□□ 0.65
SNX5-214ENST00000490175 SLFNL1Q499Z3 407 aa19.09■□□□□ 0.65
SNX5-214ENST00000490175 CLEC4GQ6UXB4 293 aa19.09■□□□□ 0.65
SNX5-214ENST00000490175 DHX32Q7L7V1 743 aaKnown RBP19.09■□□□□ 0.65
SNX5-214ENST00000490175 LPIN2Q92539 896 aa19.09■□□□□ 0.65
SNX5-214ENST00000490175 NGLY1Q96IV0 654 aa19.09■□□□□ 0.65
SNX5-214ENST00000490175 UBAP1LF5GYI3 381 aa19.08■□□□□ 0.65
SNX5-214ENST00000490175 ARID4AP29374 1257 aaPredicted RBP19.08■□□□□ 0.65
SNX5-214ENST00000490175 MCAMP43121 646 aa19.08■□□□□ 0.65
SNX5-214ENST00000490175 CCDC152Q4G0S7 254 aa19.08■□□□□ 0.65
SNX5-214ENST00000490175 Q6ZUG5 572 aa19.08■□□□□ 0.65
SNX5-214ENST00000490175 TCHHQ07283 1943 aa19.08■□□□□ 0.64
SNX5-214ENST00000490175 KCNQ2O43526 872 aa19.08■□□□□ 0.64
SNX5-214ENST00000490175 NTSR2O95665 410 aa19.08■□□□□ 0.64
SNX5-214ENST00000490175 FGFR2P21802 821 aa19.08■□□□□ 0.64
SNX5-214ENST00000490175 WASHC4Q2M389 1173 aa19.08■□□□□ 0.64
SNX5-214ENST00000490175 STOX1Q6ZVD7 989 aa19.08■□□□□ 0.64
SNX5-214ENST00000490175 NIP7Q9Y221 180 aaKnown RBP eCLIP19.08■□□□□ 0.641e-323■■□□□ 13.3
SNX5-214ENST00000490175 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
SNX5-214ENST00000490175 CSPP1Q1MSJ5 1256 aa19.07■□□□□ 0.64
SNX5-214ENST00000490175 FNBP4Q8N3X1 1017 aaPredicted RBP19.07■□□□□ 0.64
SNX5-214ENST00000490175 GTF3C6Q969F1 213 aa19.07■□□□□ 0.64
SNX5-214ENST00000490175 SYAP1Q96A49 352 aaPredicted RBP19.07■□□□□ 0.64
SNX5-214ENST00000490175 C8orf37Q96NL8 207 aa19.07■□□□□ 0.64
SNX5-214ENST00000490175 RRAGDQ9NQL2 400 aaPredicted RBP19.07■□□□□ 0.64
SNX5-214ENST00000490175 LARP1BQ659C4 914 aaKnown RBP19.07■□□□□ 0.64
SNX5-214ENST00000490175 USP48Q86UV5 1035 aa19.07■□□□□ 0.64
SNX5-214ENST00000490175 MPHOSPH8Q99549 860 aa19.07■□□□□ 0.64
SNX5-214ENST00000490175 AGXT2Q9BYV1 514 aa19.07■□□□□ 0.64
SNX5-214ENST00000490175 ATRNO75882 1429 aa19.06■□□□□ 0.64
SNX5-214ENST00000490175 E7EWF7 191 aa19.06■□□□□ 0.64
SNX5-214ENST00000490175 SLC5A1P13866 664 aa19.06■□□□□ 0.64
SNX5-214ENST00000490175 EXOSC10Q01780 885 aaKnown RBP19.06■□□□□ 0.64
SNX5-214ENST00000490175 CCDC102BQ68D86 513 aa19.06■□□□□ 0.64
SNX5-214ENST00000490175 PANK2Q9BZ23 570 aa19.06■□□□□ 0.64
SNX5-214ENST00000490175 CNTNAP4Q9C0A0 1308 aa19.05■□□□□ 0.64
SNX5-214ENST00000490175 TMEM63CQ9P1W3 806 aa19.05■□□□□ 0.64
SNX5-214ENST00000490175 FGD1P98174 961 aa19.05■□□□□ 0.64
SNX5-214ENST00000490175 PI16Q6UXB8 463 aa19.05■□□□□ 0.64
SNX5-214ENST00000490175 FBXL16Q8N461 479 aa19.05■□□□□ 0.64
SNX5-214ENST00000490175 ADD2P35612 726 aa19.04■□□□□ 0.64
SNX5-214ENST00000490175 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
SNX5-214ENST00000490175 UBE3CQ15386 1083 aa19.04■□□□□ 0.64
SNX5-214ENST00000490175 IMMTQ16891 758 aaKnown RBP19.04■□□□□ 0.64
SNX5-214ENST00000490175 CHMP4CQ96CF2 233 aa19.04■□□□□ 0.64
SNX5-214ENST00000490175 LLPHQ9BRT6 129 aaKnown RBP19.04■□□□□ 0.64
SNX5-214ENST00000490175 NSFL1CQ9UNZ2 370 aaKnown RBP19.04■□□□□ 0.64
SNX5-214ENST00000490175 SPATA31A6Q5VVP1 1343 aa19.04■□□□□ 0.64
SNX5-214ENST00000490175 VPS37CA5D8V6 355 aaPredicted RBP19.03■□□□□ 0.64
SNX5-214ENST00000490175 FOXD4L6Q3SYB3 417 aaPredicted RBP19.03■□□□□ 0.64
SNX5-214ENST00000490175 FOXD4L3Q6VB84 417 aaPredicted RBP19.03■□□□□ 0.64
SNX5-214ENST00000490175 LINC00116Q8NCU8 138 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 BRF1Q92994 677 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 RBM27Q9P2N5 1060 aaKnown RBP19.03■□□□□ 0.64
SNX5-214ENST00000490175 CNPY2Q9Y2B0 182 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 FAM177BA6PVY3 158 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 PFKFB2O60825 505 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 PHKA1P46020 1223 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 STK3Q13188 491 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 PUS7LQ9H0K6 701 aaKnown RBP19.03■□□□□ 0.64
SNX5-214ENST00000490175 THSD7AQ9UPZ6 1657 aa19.03■□□□□ 0.64
SNX5-214ENST00000490175 FOXP2O15409 715 aa19.02■□□□□ 0.64
SNX5-214ENST00000490175 GPAA1O43292 621 aa19.02■□□□□ 0.64
SNX5-214ENST00000490175 UBE2HP62256 183 aa19.02■□□□□ 0.64
SNX5-214ENST00000490175 GDPD2Q9HCC8 539 aa19.02■□□□□ 0.64
SNX5-214ENST00000490175 SCN7AQ01118 1682 aa19.02■□□□□ 0.63
SNX5-214ENST00000490175 PHF14O94880 888 aa19.01■□□□□ 0.63
SNX5-214ENST00000490175 SLC9C2Q5TAH2 1124 aa19.01■□□□□ 0.63
SNX5-214ENST00000490175 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
SNX5-214ENST00000490175 LRSAM1Q6UWE0 723 aa19.01■□□□□ 0.63
SNX5-214ENST00000490175 SEC31BQ9NQW1 1179 aa19.01■□□□□ 0.63
SNX5-214ENST00000490175 FGAP02671 866 aa19.01■□□□□ 0.63
SNX5-214ENST00000490175 CDC5LQ99459 802 aaKnown RBP19.01■□□□□ 0.63
SNX5-214ENST00000490175 PIH1D3Q9NQM4 214 aaKnown RBP19.01■□□□□ 0.63
SNX5-214ENST00000490175 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
SNX5-214ENST00000490175 DOCK2Q92608 1830 aa19.01■□□□□ 0.63
SNX5-214ENST00000490175 GADD45BO75293 160 aaPredicted RBP19■□□□□ 0.63
SNX5-214ENST00000490175 NASPP49321 788 aaPredicted RBP19■□□□□ 0.63
SNX5-214ENST00000490175 TTLL5Q6EMB2 1281 aa19■□□□□ 0.63
SNX5-214ENST00000490175 KLHL34Q8N239 644 aa19■□□□□ 0.63
SNX5-214ENST00000490175 SPATA5Q8NB90 893 aa19■□□□□ 0.63
SNX5-214ENST00000490175 HELBQ8NG08 1087 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms