RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
TRAIP-210ENST00000489948 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
TRAIP-210ENST00000489948 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
TRAIP-210ENST00000489948 ECHDC1Q9NTX5 307 aa16.37■□□□□ 0.21
TRAIP-210ENST00000489948 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
TRAIP-210ENST00000489948 GGA1Q9UJY5 639 aa16.37■□□□□ 0.21
TRAIP-210ENST00000489948 KCNJ4P48050 445 aa16.36■□□□□ 0.21
TRAIP-210ENST00000489948 TIMM10P62072 90 aa16.36■□□□□ 0.21
TRAIP-210ENST00000489948 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
TRAIP-210ENST00000489948 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
TRAIP-210ENST00000489948 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
TRAIP-210ENST00000489948 AK9Q5TCS8 1911 aa16.36■□□□□ 0.21
TRAIP-210ENST00000489948 ERC2O15083 957 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 GLRX3O76003 335 aaKnown RBP16.35■□□□□ 0.21
TRAIP-210ENST00000489948 UFL1O94874 794 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 ATP5JP18859 108 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 ADORA1P30542 326 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 DPP8Q6V1X1 898 aaPredicted RBP16.35■□□□□ 0.21
TRAIP-210ENST00000489948 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 MPNDQ8N594 471 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 PSMD1Q99460 953 aa16.35■□□□□ 0.21
TRAIP-210ENST00000489948 NSFL1CQ9UNZ2 370 aaKnown RBP16.35■□□□□ 0.21
TRAIP-210ENST00000489948 DOCK2Q92608 1830 aa16.34■□□□□ 0.21
TRAIP-210ENST00000489948 ARID4AP29374 1257 aaPredicted RBP16.34■□□□□ 0.21
TRAIP-210ENST00000489948 RGS3P49796 1198 aa16.34■□□□□ 0.21
TRAIP-210ENST00000489948 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
TRAIP-210ENST00000489948 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
TRAIP-210ENST00000489948 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
TRAIP-210ENST00000489948 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
TRAIP-210ENST00000489948 PSME4Q14997 1843 aa16.33■□□□□ 0.21
TRAIP-210ENST00000489948 SNAP23O00161 211 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 C21orf2O43822 256 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 CCDC158Q5M9N0 1113 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 CCDC102BQ68D86 513 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 SUPT20HQ8NEM7 779 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 EYA3Q99504 573 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 LTBP3Q9NS15 1303 aa16.33■□□□□ 0.2
TRAIP-210ENST00000489948 ZNF646O15015 1829 aaPredicted RBP16.33■□□□□ 0.2
TRAIP-210ENST00000489948 SEMA3EO15041 775 aa16.32■□□□□ 0.2
TRAIP-210ENST00000489948 UQCRFS1P1P0C7P4 283 aa16.32■□□□□ 0.2
TRAIP-210ENST00000489948 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
TRAIP-210ENST00000489948 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
TRAIP-210ENST00000489948 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
TRAIP-210ENST00000489948 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
TRAIP-210ENST00000489948 VPS33BQ9H267 617 aa16.32■□□□□ 0.2
TRAIP-210ENST00000489948 UTRNP46939 3433 aa16.32■□□□□ 0.2
TRAIP-210ENST00000489948 MAST2Q6P0Q8 1798 aa16.31■□□□□ 0.2
TRAIP-210ENST00000489948 COL1A1P02452 1464 aaPredicted RBP16.31■□□□□ 0.2
TRAIP-210ENST00000489948 WTIPA6NIX2 430 aaPredicted RBP16.31■□□□□ 0.2
TRAIP-210ENST00000489948 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
TRAIP-210ENST00000489948 KLRK1P26718 216 aa16.31■□□□□ 0.2
TRAIP-210ENST00000489948 PHKA1P46020 1223 aa16.31■□□□□ 0.2
TRAIP-210ENST00000489948 TTC39AQ5SRH9 613 aa16.31■□□□□ 0.2
TRAIP-210ENST00000489948 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
TRAIP-210ENST00000489948 ZNF804AQ7Z570 1209 aa16.31■□□□□ 0.2
TRAIP-210ENST00000489948 MYH7P12883 1935 aa16.31■□□□□ 0.2
TRAIP-210ENST00000489948 RFX7Q2KHR2 1363 aa16.3■□□□□ 0.2
TRAIP-210ENST00000489948 FKBP4Q02790 459 aaKnown RBP eCLIP16.3■□□□□ 0.2
TRAIP-210ENST00000489948 HAUS7Q99871 368 aa16.3■□□□□ 0.2
TRAIP-210ENST00000489948 GNL3LQ9NVN8 582 aaKnown RBP16.3■□□□□ 0.2
TRAIP-210ENST00000489948 C6orf229H3BNL8 230 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 HIBADHP31937 336 aaKnown RBP16.29■□□□□ 0.2
TRAIP-210ENST00000489948 GYG1P46976 350 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 BCAMP50895 628 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
TRAIP-210ENST00000489948 DICER1Q9UPY3 1922 aaKnown RBP16.29■□□□□ 0.2
TRAIP-210ENST00000489948 CHD4Q14839 1912 aa16.28■□□□□ 0.2
TRAIP-210ENST00000489948 IL1R1P14778 569 aa16.28■□□□□ 0.2
TRAIP-210ENST00000489948 MCAMP43121 646 aa16.28■□□□□ 0.2
TRAIP-210ENST00000489948 RASGRF1Q13972 1273 aa16.28■□□□□ 0.2
TRAIP-210ENST00000489948 WASHC4Q2M389 1173 aa16.28■□□□□ 0.2
TRAIP-210ENST00000489948 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
TRAIP-210ENST00000489948 COA1Q9GZY4 146 aa16.28■□□□□ 0.2
TRAIP-210ENST00000489948 NFKBIEO00221 500 aa16.27■□□□□ 0.2
TRAIP-210ENST00000489948 SCARF1Q14162 830 aa16.27■□□□□ 0.2
TRAIP-210ENST00000489948 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.2
TRAIP-210ENST00000489948 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.2
TRAIP-210ENST00000489948 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
TRAIP-210ENST00000489948 TAOK3Q9H2K8 898 aa16.27■□□□□ 0.2
TRAIP-210ENST00000489948 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
TRAIP-210ENST00000489948 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
TRAIP-210ENST00000489948 SCN9AQ15858 1988 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 IGSF3O75054 1194 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 SPATA5Q8NB90 893 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 BOLA2Q9H3K6 86 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 CD209Q9NNX6 404 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 HMG20BQ9P0W2 317 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 COL4A5P29400 1685 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 SBF1O95248 1867 aa16.26■□□□□ 0.19
TRAIP-210ENST00000489948 SALL1Q9NSC2 1324 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms