RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 MTMR6Q9Y217 621 aa31.5■■■□□ 2.63
KCNC4-207ENST00000489935 Q6ZUG5 572 aa31.5■■■□□ 2.63
KCNC4-207ENST00000489935 NGLY1Q96IV0 654 aa31.5■■■□□ 2.63
KCNC4-207ENST00000489935 MYH7P12883 1935 aa31.49■■■□□ 2.63
KCNC4-207ENST00000489935 UBAP1LF5GYI3 381 aa31.49■■■□□ 2.63
KCNC4-207ENST00000489935 USP48Q86UV5 1035 aa31.49■■■□□ 2.63
KCNC4-207ENST00000489935 COL5A3P25940 1745 aaPredicted RBP31.49■■■□□ 2.63
KCNC4-207ENST00000489935 VPS72Q15906 364 aa31.48■■■□□ 2.63
KCNC4-207ENST00000489935 LRRFIP1Q32MZ4 808 aaKnown RBP31.48■■■□□ 2.63
KCNC4-207ENST00000489935 ZNF512BQ96KM6 892 aaPredicted RBP31.48■■■□□ 2.63
KCNC4-207ENST00000489935 LRP5O75197 1615 aa31.48■■■□□ 2.63
KCNC4-207ENST00000489935 DDX60Q8IY21 1712 aaKnown RBP31.48■■■□□ 2.63
KCNC4-207ENST00000489935 ZFYP08048 801 aaPredicted RBP31.48■■■□□ 2.63
KCNC4-207ENST00000489935 STK3Q13188 491 aa31.48■■■□□ 2.63
KCNC4-207ENST00000489935 PARP10Q53GL7 1025 aa31.48■■■□□ 2.63
KCNC4-207ENST00000489935 TMEM63CQ9P1W3 806 aa31.48■■■□□ 2.63
KCNC4-207ENST00000489935 WASHC4Q2M389 1173 aa31.47■■■□□ 2.63
KCNC4-207ENST00000489935 HELBQ8NG08 1087 aaPredicted RBP31.47■■■□□ 2.63
KCNC4-207ENST00000489935 NIP7Q9Y221 180 aaKnown RBP eCLIP31.47■■■□□ 2.63
KCNC4-207ENST00000489935 MBD3O95983 291 aa31.47■■■□□ 2.63
KCNC4-207ENST00000489935 CNPY2Q9Y2B0 182 aa31.47■■■□□ 2.63
KCNC4-207ENST00000489935 FOXP2O15409 715 aa31.46■■■□□ 2.63
KCNC4-207ENST00000489935 GADD45BO75293 160 aaPredicted RBP31.46■■■□□ 2.63
KCNC4-207ENST00000489935 SEC31BQ9NQW1 1179 aa31.46■■■□□ 2.63
KCNC4-207ENST00000489935 NTSR2O95665 410 aa31.45■■■□□ 2.63
KCNC4-207ENST00000489935 LRRC2Q9BYS8 371 aa31.45■■■□□ 2.63
KCNC4-207ENST00000489935 MROH5Q6ZUA9 1318 aa31.45■■■□□ 2.63
KCNC4-207ENST00000489935 FGFR2P21802 821 aa31.45■■■□□ 2.62
KCNC4-207ENST00000489935 TTLL5Q6EMB2 1281 aa31.45■■■□□ 2.62
KCNC4-207ENST00000489935 PUS7LQ9H0K6 701 aaKnown RBP31.45■■■□□ 2.62
KCNC4-207ENST00000489935 MYO5AQ9Y4I1 1855 aaKnown RBP31.44■■■□□ 2.62
KCNC4-207ENST00000489935 E7EWF7 191 aa31.44■■■□□ 2.62
KCNC4-207ENST00000489935 DHX32Q7L7V1 743 aaKnown RBP31.44■■■□□ 2.62
KCNC4-207ENST00000489935 TMEM87AQ8NBN3 555 aa31.44■■■□□ 2.62
KCNC4-207ENST00000489935 LINC00116Q8NCU8 138 aa31.44■■■□□ 2.62
KCNC4-207ENST00000489935 HMGB1P09429 215 aaKnown RBP31.43■■■□□ 2.62
KCNC4-207ENST00000489935 PHKA1P46020 1223 aa31.43■■■□□ 2.62
KCNC4-207ENST00000489935 LARP1BQ659C4 914 aaKnown RBP31.43■■■□□ 2.62
KCNC4-207ENST00000489935 CCDC102BQ68D86 513 aa31.43■■■□□ 2.62
KCNC4-207ENST00000489935 APPBP2Q92624 585 aa31.43■■■□□ 2.62
KCNC4-207ENST00000489935 KCNQ4P56696 695 aa31.43■■■□□ 2.62
KCNC4-207ENST00000489935 EXOSC10Q01780 885 aaKnown RBP31.43■■■□□ 2.62
KCNC4-207ENST00000489935 PUM3Q15397 648 aaKnown RBP31.43■■■□□ 2.62
KCNC4-207ENST00000489935 PTF1AQ7RTS3 328 aa31.43■■■□□ 2.62
KCNC4-207ENST00000489935 ZNF831Q5JPB2 1677 aa31.42■■■□□ 2.62
KCNC4-207ENST00000489935 LPIN2Q92539 896 aa31.42■■■□□ 2.62
KCNC4-207ENST00000489935 GTF3C6Q969F1 213 aa31.42■■■□□ 2.62
KCNC4-207ENST00000489935 VPS37CA5D8V6 355 aaPredicted RBP31.41■■■□□ 2.62
KCNC4-207ENST00000489935 BRF1Q92994 677 aa31.41■■■□□ 2.62
KCNC4-207ENST00000489935 ATP6V1DQ9Y5K8 247 aa31.41■■■□□ 2.62
KCNC4-207ENST00000489935 BCORQ6W2J9 1755 aa31.41■■■□□ 2.62
KCNC4-207ENST00000489935 ARID4AP29374 1257 aaPredicted RBP31.41■■■□□ 2.62
KCNC4-207ENST00000489935 PIH1D3Q9NQM4 214 aaKnown RBP31.41■■■□□ 2.62
KCNC4-207ENST00000489935 ARAP2Q8WZ64 1704 aa31.4■■■□□ 2.62
KCNC4-207ENST00000489935 SNAP23O00161 211 aa31.39■■■□□ 2.62
KCNC4-207ENST00000489935 FNBP4Q8N3X1 1017 aaPredicted RBP31.39■■■□□ 2.62
KCNC4-207ENST00000489935 MPHOSPH8Q99549 860 aa31.39■■■□□ 2.62
KCNC4-207ENST00000489935 LAMB2P55268 1798 aa31.39■■■□□ 2.62
KCNC4-207ENST00000489935 HSP90B1P14625 803 aaKnown RBP31.39■■■□□ 2.62
KCNC4-207ENST00000489935 CCDC152Q4G0S7 254 aa31.39■■■□□ 2.62
KCNC4-207ENST00000489935 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.39■■■□□ 2.62
KCNC4-207ENST00000489935 ADD2P35612 726 aa31.38■■■□□ 2.61
KCNC4-207ENST00000489935 FGAP02671 866 aa31.37■■■□□ 2.61
KCNC4-207ENST00000489935 DNM1Q05193 864 aaKnown RBP31.37■■■□□ 2.61
KCNC4-207ENST00000489935 TTF1Q15361 905 aaPredicted RBP31.37■■■□□ 2.61
KCNC4-207ENST00000489935 UQCRFS1P1P0C7P4 283 aa31.37■■■□□ 2.61
KCNC4-207ENST00000489935 CDC37L1Q7L3B6 337 aa31.37■■■□□ 2.61
KCNC4-207ENST00000489935 AGXT2Q9BYV1 514 aa31.37■■■□□ 2.61
KCNC4-207ENST00000489935 RTN4Q9NQC3 1192 aaKnown RBP31.37■■■□□ 2.61
KCNC4-207ENST00000489935 CTNNA3Q9UI47 895 aa31.37■■■□□ 2.61
KCNC4-207ENST00000489935 ZNF652Q9Y2D9 606 aa31.37■■■□□ 2.61
KCNC4-207ENST00000489935 GPAA1O43292 621 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 JAK2O60674 1132 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 PDCP20941 246 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 FGD1P98174 961 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 SLC9C2Q5TAH2 1124 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 CLEC4GQ6UXB4 293 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 RTL9Q8NET4 1388 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 SYCE3A1L190 88 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 PDIA4P13667 645 aaKnown RBP31.36■■■□□ 2.61
KCNC4-207ENST00000489935 SCRN1Q12765 414 aa31.36■■■□□ 2.61
KCNC4-207ENST00000489935 SLC5A1P13866 664 aa31.35■■■□□ 2.61
KCNC4-207ENST00000489935 ZSCAN25Q6NSZ9 544 aa31.35■■■□□ 2.61
KCNC4-207ENST00000489935 PFKFB2O60825 505 aa31.34■■■□□ 2.61
KCNC4-207ENST00000489935 APOBRQ0VD83 1088 aa31.34■■■□□ 2.61
KCNC4-207ENST00000489935 SMIM5Q71RC9 77 aa31.34■■■□□ 2.61
KCNC4-207ENST00000489935 CHST3Q7LGC8 479 aa31.34■■■□□ 2.61
KCNC4-207ENST00000489935 FIBPO43427 364 aa31.34■■■□□ 2.61
KCNC4-207ENST00000489935 HAND2P61296 217 aa31.34■■■□□ 2.61
KCNC4-207ENST00000489935 COL4A1P02462 1669 aa31.33■■■□□ 2.61
KCNC4-207ENST00000489935 IDH1O75874 414 aaKnown RBP31.33■■■□□ 2.61
KCNC4-207ENST00000489935 LRSAM1Q6UWE0 723 aa31.33■■■□□ 2.61
KCNC4-207ENST00000489935 IGHMBP2P38935 993 aaKnown RBP31.32■■■□□ 2.6
KCNC4-207ENST00000489935 IMMTQ16891 758 aaKnown RBP31.32■■■□□ 2.6
KCNC4-207ENST00000489935 RBSNQ9H1K0 784 aa31.32■■■□□ 2.6
KCNC4-207ENST00000489935 UBE3CQ15386 1083 aa31.32■■■□□ 2.6
KCNC4-207ENST00000489935 ERFEQ4G0M1 354 aa31.32■■■□□ 2.6
KCNC4-207ENST00000489935 FERMT3Q86UX7 667 aa31.32■■■□□ 2.6
KCNC4-207ENST00000489935 USP21Q9UK80 565 aa31.32■■■□□ 2.6
KCNC4-207ENST00000489935 NASPP49321 788 aaPredicted RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms