RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 CHADLQ6NUI6 762 aa28.38■■■□□ 2.13
LSM10-203ENST00000489912 PNMA8AQ86V59 439 aaPredicted RBP28.38■■■□□ 2.13
LSM10-203ENST00000489912 PANK1Q8TE04 598 aa28.38■■■□□ 2.13
LSM10-203ENST00000489912 COA1Q9GZY4 146 aa28.38■■■□□ 2.13
LSM10-203ENST00000489912 SIL1Q9H173 461 aa28.38■■■□□ 2.13
LSM10-203ENST00000489912 GNAI2P04899 355 aa28.37■■■□□ 2.13
LSM10-203ENST00000489912 PODNQ7Z5L7 613 aa28.37■■■□□ 2.13
LSM10-203ENST00000489912 LDHDQ86WU2 507 aa28.37■■■□□ 2.13
LSM10-203ENST00000489912 CNOT7Q9UIV1 285 aaKnown RBP28.37■■■□□ 2.13
LSM10-203ENST00000489912 HSPA6P17066 643 aa28.36■■■□□ 2.13
LSM10-203ENST00000489912 PTPN12Q05209 780 aaKnown RBP28.36■■■□□ 2.13
LSM10-203ENST00000489912 MICALL2Q8IY33 904 aa28.36■■■□□ 2.13
LSM10-203ENST00000489912 USP17L3A6NCW0 530 aa28.35■■■□□ 2.13
LSM10-203ENST00000489912 USP17L4A6NCW7 530 aa28.35■■■□□ 2.13
LSM10-203ENST00000489912 USP17L1Q7RTZ2 530 aa28.35■■■□□ 2.13
LSM10-203ENST00000489912 ADARB2Q9NS39 739 aaKnown RBP28.35■■■□□ 2.13
LSM10-203ENST00000489912 PA2G4Q9UQ80 394 aaKnown RBP28.35■■■□□ 2.13
LSM10-203ENST00000489912 ADAMTSL1Q8N6G6 1762 aa28.34■■■□□ 2.13
LSM10-203ENST00000489912 H7C1D1 291 aa28.34■■■□□ 2.13
LSM10-203ENST00000489912 EYA2O00167 538 aa28.34■■■□□ 2.13
LSM10-203ENST00000489912 VIL1P09327 827 aaKnown RBP28.34■■■□□ 2.13
LSM10-203ENST00000489912 SRGAP3O43295 1099 aa28.33■■■□□ 2.13
LSM10-203ENST00000489912 ZNF804AQ7Z570 1209 aa28.33■■■□□ 2.13
LSM10-203ENST00000489912 C1orf115Q9H7X2 142 aa28.33■■■□□ 2.13
LSM10-203ENST00000489912 IRS2Q9Y4H2 1338 aa28.33■■■□□ 2.13
LSM10-203ENST00000489912 RPS12P25398 132 aaKnown RBP28.32■■■□□ 2.12
LSM10-203ENST00000489912 UBE4AQ14139 1066 aa28.32■■■□□ 2.12
LSM10-203ENST00000489912 RSBN1LQ6PCB5 846 aaPredicted RBP28.32■■■□□ 2.12
LSM10-203ENST00000489912 USP50Q70EL3 339 aaPredicted RBP28.32■■■□□ 2.12
LSM10-203ENST00000489912 MXD3Q9BW11 206 aa28.32■■■□□ 2.12
LSM10-203ENST00000489912 CD209Q9NNX6 404 aa28.32■■■□□ 2.12
LSM10-203ENST00000489912 ZNF646O15015 1829 aaPredicted RBP28.32■■■□□ 2.12
LSM10-203ENST00000489912 MAP1SQ66K74 1059 aaPredicted RBP28.31■■■□□ 2.12
LSM10-203ENST00000489912 C15orf52Q6ZUT6 534 aaKnown RBP28.31■■■□□ 2.12
LSM10-203ENST00000489912 DPF2Q92785 391 aa28.31■■■□□ 2.12
LSM10-203ENST00000489912 MS4A1P11836 297 aa28.3■■■□□ 2.12
LSM10-203ENST00000489912 GYG1P46976 350 aa28.3■■■□□ 2.12
LSM10-203ENST00000489912 RBM26Q5T8P6 1007 aaKnown RBP28.3■■■□□ 2.12
LSM10-203ENST00000489912 VGLL2Q8N8G2 317 aa28.3■■■□□ 2.12
LSM10-203ENST00000489912 TRPM4Q8TD43 1214 aa28.3■■■□□ 2.12
LSM10-203ENST00000489912 PDE8BO95263 885 aa28.29■■■□□ 2.12
LSM10-203ENST00000489912 GTF2IP78347 998 aa28.29■■■□□ 2.12
LSM10-203ENST00000489912 TBC1D10BQ4KMP7 808 aaPredicted RBP28.29■■■□□ 2.12
LSM10-203ENST00000489912 TTLL5Q6EMB2 1281 aa28.29■■■□□ 2.12
LSM10-203ENST00000489912 ATG9AQ7Z3C6 839 aa28.29■■■□□ 2.12
LSM10-203ENST00000489912 SAMD7Q7Z3H4 446 aa28.29■■■□□ 2.12
LSM10-203ENST00000489912 JAG2Q9Y219 1238 aa28.28■■■□□ 2.12
LSM10-203ENST00000489912 ZBTB7BO15156 539 aaPredicted RBP28.27■■■□□ 2.12
LSM10-203ENST00000489912 DACT2Q5SW24 774 aa28.27■■■□□ 2.12
LSM10-203ENST00000489912 STRIP1Q5VSL9 837 aa28.27■■■□□ 2.12
LSM10-203ENST00000489912 AGBL3Q8NEM8 1001 aa28.27■■■□□ 2.12
LSM10-203ENST00000489912 PNMA6EA0A0J9YXQ4 647 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 CIAO1O76071 339 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 HIRAP54198 1017 aaPredicted RBP28.26■■■□□ 2.11
LSM10-203ENST00000489912 HTRA3P83110 453 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 MTX1Q13505 466 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 PUM3Q15397 648 aaKnown RBP28.26■■■□□ 2.11
LSM10-203ENST00000489912 VPS37DQ86XT2 251 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 CNTROBQ8N137 903 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 COPRSQ9NQ92 184 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 COG6Q9Y2V7 657 aa28.26■■■□□ 2.11
LSM10-203ENST00000489912 EGFRP00533 1210 aa28.25■■■□□ 2.11
LSM10-203ENST00000489912 HIBADHP31937 336 aaKnown RBP28.25■■■□□ 2.11
LSM10-203ENST00000489912 APLP1P51693 650 aa28.25■■■□□ 2.11
LSM10-203ENST00000489912 FAM84BQ96KN1 310 aaPredicted RBP28.25■■■□□ 2.11
LSM10-203ENST00000489912 CEP126Q9P2H0 1117 aa28.25■■■□□ 2.11
LSM10-203ENST00000489912 IL1R1P14778 569 aa28.24■■■□□ 2.11
LSM10-203ENST00000489912 IL15P40933 162 aaPredicted RBP28.24■■■□□ 2.11
LSM10-203ENST00000489912 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.24■■■□□ 2.11
LSM10-203ENST00000489912 FBXO3Q9UK99 471 aa28.24■■■□□ 2.11
LSM10-203ENST00000489912 IQSEC3Q9UPP2 1182 aaPredicted RBP28.24■■■□□ 2.11
LSM10-203ENST00000489912 POLR2AP24928 1970 aaKnown RBP28.23■■■□□ 2.11
LSM10-203ENST00000489912 IFIT1P09914 478 aaKnown RBP28.23■■■□□ 2.11
LSM10-203ENST00000489912 USP17L8P0C7I0 530 aa28.23■■■□□ 2.11
LSM10-203ENST00000489912 MVPQ14764 893 aaKnown RBP28.23■■■□□ 2.11
LSM10-203ENST00000489912 KIF4BQ2VIQ3 1234 aa28.23■■■□□ 2.11
LSM10-203ENST00000489912 GMLQ99445 158 aa28.23■■■□□ 2.11
LSM10-203ENST00000489912 SLC5A1P13866 664 aa28.22■■■□□ 2.11
LSM10-203ENST00000489912 CAVIN4Q5BKX8 364 aa28.22■■■□□ 2.11
LSM10-203ENST00000489912 MYO3BQ8WXR4 1341 aa28.21■■■□□ 2.11
LSM10-203ENST00000489912 ZNF609O15014 1411 aa28.21■■■□□ 2.11
LSM10-203ENST00000489912 FGFR2P21802 821 aa28.21■■■□□ 2.11
LSM10-203ENST00000489912 ATP2B3Q16720 1220 aa28.21■■■□□ 2.11
LSM10-203ENST00000489912 C20orf194Q5TEA3 1177 aa28.21■■■□□ 2.11
LSM10-203ENST00000489912 KIAA0825Q8IV33 1275 aa28.21■■■□□ 2.11
LSM10-203ENST00000489912 MYH13Q9UKX3 1938 aa28.21■■■□□ 2.11
LSM10-203ENST00000489912 FRAT2O75474 233 aaPredicted RBP28.2■■■□□ 2.1
LSM10-203ENST00000489912 ITGBL1O95965 494 aaPredicted RBP28.2■■■□□ 2.1
LSM10-203ENST00000489912 BCAMP50895 628 aa28.2■■■□□ 2.1
LSM10-203ENST00000489912 ATP8B2P98198 1209 aa28.2■■■□□ 2.1
LSM10-203ENST00000489912 LPIN2Q92539 896 aa28.2■■■□□ 2.1
LSM10-203ENST00000489912 ZNF280AP59817 542 aaPredicted RBP28.19■■■□□ 2.1
LSM10-203ENST00000489912 FBXO33Q7Z6M2 555 aa28.19■■■□□ 2.1
LSM10-203ENST00000489912 TDRD7Q8NHU6 1098 aaKnown RBP28.19■■■□□ 2.1
LSM10-203ENST00000489912 MYOZ2Q9NPC6 264 aa28.19■■■□□ 2.1
LSM10-203ENST00000489912 PASKQ96RG2 1323 aa28.18■■■□□ 2.1
LSM10-203ENST00000489912 F8W031 263 aaPredicted RBP28.18■■■□□ 2.1
LSM10-203ENST00000489912 FMR1Q06787 632 aaKnown RBP eCLIP28.18■■■□□ 2.1
LSM10-203ENST00000489912 CHAF1AQ13111 956 aaPredicted RBP28.18■■■□□ 2.1
LSM10-203ENST00000489912 G3BP1Q13283 466 aaKnown RBP eCLIP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms