RNA–Protein interactions for RNA: ENST00000489770.1

SETD3-208, Transcript of SET domain containing 3, human

TSL 5

Gene SETD3, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SETD3-208	ENST00000489770	TOGARAM1	Q9Y4F4	1720 aa		13.86	□□□□□ -0.19
SETD3-208	ENST00000489770	C5	P01031	1676 aa		13.85	□□□□□ -0.19
SETD3-208	ENST00000489770	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
SETD3-208	ENST00000489770	WASHC4	Q2M389	1173 aa		13.85	□□□□□ -0.19
SETD3-208	ENST00000489770	TRIM46	Q7Z4K8	759 aa		13.85	□□□□□ -0.19
SETD3-208	ENST00000489770	IP6K1	Q92551	441 aa		13.85	□□□□□ -0.19
SETD3-208	ENST00000489770	C4B	P0C0L5	1744 aa		13.84	□□□□□ -0.19
SETD3-208	ENST00000489770	DOT1L	Q8TEK3	1739 aa		13.84	□□□□□ -0.19
SETD3-208	ENST00000489770	TMF1	P82094	1093 aa		13.84	□□□□□ -0.19
SETD3-208	ENST00000489770	MPRIP	Q6WCQ1	1025 aa		13.84	□□□□□ -0.19
SETD3-208	ENST00000489770	KIF13B	Q9NQT8	1826 aa		13.83	□□□□□ -0.2
SETD3-208	ENST00000489770	ERVH48-1	M5A8F1	160 aa		13.83	□□□□□ -0.2
SETD3-208	ENST00000489770	RASSF7	Q02833	373 aa		13.83	□□□□□ -0.2
SETD3-208	ENST00000489770	NBPF1	Q3BBV0	1214 aa		13.83	□□□□□ -0.2
SETD3-208	ENST00000489770	TMPRSS4	Q9NRS4	437 aa		13.83	□□□□□ -0.2
SETD3-208	ENST00000489770	PKD1L3	Q7Z443	1732 aa		13.83	□□□□□ -0.2
SETD3-208	ENST00000489770	PASK	Q96RG2	1323 aa		13.83	□□□□□ -0.2
SETD3-208	ENST00000489770	MEGF6	O75095	1541 aa		13.82	□□□□□ -0.2
SETD3-208	ENST00000489770	LMNB1	P20700	586 aa		13.82	□□□□□ -0.2
SETD3-208	ENST00000489770	WWC1	Q8IX03	1113 aa		13.82	□□□□□ -0.2
SETD3-208	ENST00000489770	LTV1	Q96GA3	475 aa	Predicted RBP	13.82	□□□□□ -0.2
SETD3-208	ENST00000489770	LOC102724428	A0A0B4J2F2	783 aa		13.81	□□□□□ -0.2
SETD3-208	ENST00000489770	SIK1	P57059	783 aa		13.81	□□□□□ -0.2
SETD3-208	ENST00000489770	MRPL14	Q6P1L8	145 aa	Known RBP	13.81	□□□□□ -0.2
SETD3-208	ENST00000489770	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.81	□□□□□ -0.2
SETD3-208	ENST00000489770	MAP2K1	Q02750	393 aa	Predicted RBP	13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	CBLB	Q13191	982 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	ITPK1	Q13572	414 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	RNF20	Q5VTR2	975 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	NME9	Q86XW9	330 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	MEIOB	Q8N635	442 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	CEP126	Q9P2H0	1117 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	PARP3	Q9Y6F1	533 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	CGNL1	Q0VF96	1302 aa		13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	KTN1	Q86UP2	1357 aa	Known RBP	13.8	□□□□□ -0.2
SETD3-208	ENST00000489770	TNRC18	O15417	2968 aa	Predicted RBP	13.79	□□□□□ -0.2
SETD3-208	ENST00000489770	GYS1	P13807	737 aa		13.79	□□□□□ -0.2
SETD3-208	ENST00000489770	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SETD3-208	ENST00000489770	PIGB	Q92521	554 aa		13.79	□□□□□ -0.2
SETD3-208	ENST00000489770	CLUAP1	Q96AJ1	413 aa		13.79	□□□□□ -0.2
SETD3-208	ENST00000489770	SENP2	Q9HC62	589 aa		13.79	□□□□□ -0.2
SETD3-208	ENST00000489770	UBR3	Q6ZT12	1888 aa		13.78	□□□□□ -0.2
SETD3-208	ENST00000489770	TMEM88B	A6NKF7	163 aa		13.78	□□□□□ -0.2
SETD3-208	ENST00000489770	CHRNA5	P30532	468 aa		13.78	□□□□□ -0.2
SETD3-208	ENST00000489770	SCARF1	Q14162	830 aa		13.78	□□□□□ -0.2
SETD3-208	ENST00000489770	TRAPPC3L	Q5T215	181 aa		13.78	□□□□□ -0.2
SETD3-208	ENST00000489770	EVC2	Q86UK5	1308 aa		13.78	□□□□□ -0.2
SETD3-208	ENST00000489770	RASSF10	A6NK89	507 aa		13.77	□□□□□ -0.21
SETD3-208	ENST00000489770	ZFP42	Q96MM3	310 aa		13.77	□□□□□ -0.21
SETD3-208	ENST00000489770	PURB	Q96QR8	312 aa	Known RBP	13.77	□□□□□ -0.21
SETD3-208	ENST00000489770	TAF1L	Q8IZX4	1826 aa		13.76	□□□□□ -0.21
SETD3-208	ENST00000489770	UPP2	O95045	317 aa		13.76	□□□□□ -0.21
SETD3-208	ENST00000489770	C6orf118	Q5T5N4	469 aa		13.76	□□□□□ -0.21
SETD3-208	ENST00000489770	TRIM47	Q96LD4	638 aa		13.76	□□□□□ -0.21
SETD3-208	ENST00000489770	PDE4DIP	Q5VU43	2346 aa		13.76	□□□□□ -0.21
SETD3-208	ENST00000489770	SBNO2	Q9Y2G9	1366 aa		13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	SEMA3F	Q13275	785 aa		13.75	□□□□□ -0.21
SETD3-208	ENST00000489770		Q6ZVU0	165 aa		13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	LINC00528	Q8N1L1	170 aa		13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	KIFC2	Q96AC6	838 aa		13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	MCOLN1	Q9GZU1	580 aa		13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	CYLD	Q9NQC7	956 aa		13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	RTCB	Q9Y3I0	505 aa	Known RBP	13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	BRCA1	P38398	1863 aa	Known RBP	13.75	□□□□□ -0.21
SETD3-208	ENST00000489770	ARFGEF1	Q9Y6D6	1849 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	PCDH11X	Q9BZA7	1347 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	PCDH11Y	Q9BZA8	1340 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	WDR33	Q9C0J8	1336 aa	Known RBP	13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	CYP27B1	O15528	508 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	SNRPB	P14678	240 aa	Known RBP	13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	HOXC9	P31274	260 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	DEFB115	Q30KQ5	88 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	NBPF6	Q5VWK0	638 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	NBPF4	Q96M43	638 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	PCDHB11	Q9Y5F2	797 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	CD163L1	Q9NR16	1453 aa		13.74	□□□□□ -0.21
SETD3-208	ENST00000489770	LILRA1	O75019	489 aa		13.73	□□□□□ -0.21
SETD3-208	ENST00000489770	BMP2	P12643	396 aa		13.73	□□□□□ -0.21
SETD3-208	ENST00000489770	SOX11	P35716	441 aa		13.73	□□□□□ -0.21
SETD3-208	ENST00000489770	TSEN34	Q9BSV6	310 aa	Known RBP	13.73	□□□□□ -0.21
SETD3-208	ENST00000489770	FAM208A	Q9UK61	1670 aa	Known RBP	13.72	□□□□□ -0.21
SETD3-208	ENST00000489770	NFKBIE	O00221	500 aa		13.72	□□□□□ -0.21
SETD3-208	ENST00000489770	ADD1	P35611	737 aa	Known RBP	13.72	□□□□□ -0.21
SETD3-208	ENST00000489770	SLFNL1	Q499Z3	407 aa		13.72	□□□□□ -0.21
SETD3-208	ENST00000489770	LDHD	Q86WU2	507 aa		13.72	□□□□□ -0.21
SETD3-208	ENST00000489770	RAPGEF4	Q8WZA2	1011 aa		13.72	□□□□□ -0.21
SETD3-208	ENST00000489770	AGBL1	Q96MI9	1066 aa		13.72	□□□□□ -0.21
SETD3-208	ENST00000489770	MAP3K19	Q56UN5	1328 aa		13.71	□□□□□ -0.21
SETD3-208	ENST00000489770	C4A	P0C0L4	1744 aa		13.71	□□□□□ -0.21
SETD3-208	ENST00000489770	DDR1	Q08345	913 aa		13.71	□□□□□ -0.21
SETD3-208	ENST00000489770	ASAP1	Q9ULH1	1129 aa		13.71	□□□□□ -0.21
SETD3-208	ENST00000489770	POM121C	A8CG34	1229 aa		13.7	□□□□□ -0.22
SETD3-208	ENST00000489770	TAT	P17735	454 aa	Predicted RBP	13.7	□□□□□ -0.22
SETD3-208	ENST00000489770	RFC4	P35249	363 aa		13.7	□□□□□ -0.22
SETD3-208	ENST00000489770	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.7	□□□□□ -0.22
SETD3-208	ENST00000489770	SBF1	O95248	1867 aa		13.7	□□□□□ -0.22
SETD3-208	ENST00000489770	RELB	Q01201	579 aa		13.69	□□□□□ -0.22
SETD3-208	ENST00000489770	RNF135	Q8IUD6	432 aa		13.69	□□□□□ -0.22
SETD3-208	ENST00000489770	USHBP1	Q8N6Y0	703 aa		13.69	□□□□□ -0.22
SETD3-208	ENST00000489770	RPS6KA4	O75676	772 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms