RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TAF5LO75529 589 aa17.24■□□□□ 0.35
VPS26A-205ENST00000489656 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
VPS26A-205ENST00000489656 ALDH1B1P30837 517 aa17.23■□□□□ 0.35
VPS26A-205ENST00000489656 GORABQ5T7V8 394 aa17.23■□□□□ 0.35
VPS26A-205ENST00000489656 CASC1Q6TDU7 716 aa17.23■□□□□ 0.35
VPS26A-205ENST00000489656 RILPL2Q969X0 211 aa17.23■□□□□ 0.35
VPS26A-205ENST00000489656 MASTLQ96GX5 879 aa17.23■□□□□ 0.35
VPS26A-205ENST00000489656 MTFR1LQ9H019 292 aa17.23■□□□□ 0.35
VPS26A-205ENST00000489656 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
VPS26A-205ENST00000489656 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
VPS26A-205ENST00000489656 UQCRFS1P1P0C7P4 283 aa17.22■□□□□ 0.35
VPS26A-205ENST00000489656 ARID4AP29374 1257 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-205ENST00000489656 TTC39AQ5SRH9 613 aa17.22■□□□□ 0.35
VPS26A-205ENST00000489656 STYK1Q6J9G0 422 aa17.22■□□□□ 0.35
VPS26A-205ENST00000489656 XDHP47989 1333 aa17.21■□□□□ 0.35
VPS26A-205ENST00000489656 CHMLP26374 656 aa17.21■□□□□ 0.35
VPS26A-205ENST00000489656 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
VPS26A-205ENST00000489656 ZNF804BA4D1E1 1349 aa17.21■□□□□ 0.34
VPS26A-205ENST00000489656 H0YIN7 160 aa17.2■□□□□ 0.34
VPS26A-205ENST00000489656 SEC24BO95487 1268 aa17.2■□□□□ 0.34
VPS26A-205ENST00000489656 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-205ENST00000489656 R3HDM1Q15032 1099 aaKnown RBP17.2■□□□□ 0.34
VPS26A-205ENST00000489656 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
VPS26A-205ENST00000489656 C2CD5Q86YS7 1000 aa17.2■□□□□ 0.34
VPS26A-205ENST00000489656 SP8Q8IXZ3 490 aa17.2■□□□□ 0.34
VPS26A-205ENST00000489656 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
VPS26A-205ENST00000489656 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
VPS26A-205ENST00000489656 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
VPS26A-205ENST00000489656 SNAP23O00161 211 aa17.19■□□□□ 0.34
VPS26A-205ENST00000489656 HIP1O00291 1037 aa17.19■□□□□ 0.34
VPS26A-205ENST00000489656 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
VPS26A-205ENST00000489656 PHKA1P46020 1223 aa17.19■□□□□ 0.34
VPS26A-205ENST00000489656 C15orf52Q6ZUT6 534 aaKnown RBP17.19■□□□□ 0.34
VPS26A-205ENST00000489656 PAG1Q9NWQ8 432 aa17.19■□□□□ 0.34
VPS26A-205ENST00000489656 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
VPS26A-205ENST00000489656 MAST2Q6P0Q8 1798 aa17.18■□□□□ 0.34
VPS26A-205ENST00000489656 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
VPS26A-205ENST00000489656 RBM19Q9Y4C8 960 aaKnown RBP17.18■□□□□ 0.34
VPS26A-205ENST00000489656 CHD4Q14839 1912 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 ATP2B4P23634 1241 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 POLD1P28340 1107 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 MCAMP43121 646 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 KCNJ4P48050 445 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 SCARF1Q14162 830 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 FBXO33Q7Z6M2 555 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 CNKSR1Q969H4 720 aa17.17■□□□□ 0.34
VPS26A-205ENST00000489656 DNAJC2Q99543 621 aaKnown RBP17.17■□□□□ 0.34
VPS26A-205ENST00000489656 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
VPS26A-205ENST00000489656 GPSM2P81274 684 aa17.16■□□□□ 0.34
VPS26A-205ENST00000489656 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-205ENST00000489656 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
VPS26A-205ENST00000489656 ESYT1Q9BSJ8 1104 aa17.16■□□□□ 0.34
VPS26A-205ENST00000489656 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
VPS26A-205ENST00000489656 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
VPS26A-205ENST00000489656 ANKIB1Q9P2G1 1089 aa17.16■□□□□ 0.34
VPS26A-205ENST00000489656 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
VPS26A-205ENST00000489656 ARFGEF1Q9Y6D6 1849 aa17.15■□□□□ 0.34
VPS26A-205ENST00000489656 GOLIM4O00461 696 aa17.15■□□□□ 0.34
VPS26A-205ENST00000489656 SEMA3EO15041 775 aa17.15■□□□□ 0.34
VPS26A-205ENST00000489656 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
VPS26A-205ENST00000489656 BCAMP50895 628 aa17.15■□□□□ 0.34
VPS26A-205ENST00000489656 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
VPS26A-205ENST00000489656 EDC3Q96F86 508 aaKnown RBP17.15■□□□□ 0.34
VPS26A-205ENST00000489656 RAD50Q92878 1312 aa17.15■□□□□ 0.34
VPS26A-205ENST00000489656 PSME4Q14997 1843 aa17.14■□□□□ 0.34
VPS26A-205ENST00000489656 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-205ENST00000489656 SGSM2O43147 1006 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 REC8O95072 547 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 CHRNA5P30532 468 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 MFAP1P55081 439 aaKnown RBP17.14■□□□□ 0.33
VPS26A-205ENST00000489656 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-205ENST00000489656 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
VPS26A-205ENST00000489656 SNRKQ9NRH2 765 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 GGA1Q9UJY5 639 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 NDUFB9Q9Y6M9 179 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
VPS26A-205ENST00000489656 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
VPS26A-205ENST00000489656 ZAP70P43403 619 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 GYG1P46976 350 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 TGFB2P61812 414 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
VPS26A-205ENST00000489656 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 LRRFIP1Q32MZ4 808 aaKnown RBP17.13■□□□□ 0.33
VPS26A-205ENST00000489656 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
VPS26A-205ENST00000489656 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 NSFL1CQ9UNZ2 370 aaKnown RBP17.13■□□□□ 0.33
VPS26A-205ENST00000489656 FER1L6Q2WGJ9 1857 aa17.13■□□□□ 0.33
VPS26A-205ENST00000489656 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
VPS26A-205ENST00000489656 UFL1O94874 794 aa17.12■□□□□ 0.33
VPS26A-205ENST00000489656 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
VPS26A-205ENST00000489656 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
VPS26A-205ENST00000489656 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
VPS26A-205ENST00000489656 SLC51AQ86UW1 340 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms