RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 A0A1W2PP64 1363 aa10.47□□□□□ -0.73
SMC6-209ENST00000489535 NPC1L1Q9UHC9 1359 aa10.47□□□□□ -0.73
SMC6-209ENST00000489535 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
SMC6-209ENST00000489535 KCNA6P17658 529 aa10.46□□□□□ -0.73
SMC6-209ENST00000489535 FAM182BQ5T319 152 aa10.46□□□□□ -0.73
SMC6-209ENST00000489535 ZNF592Q92610 1267 aa10.46□□□□□ -0.73
SMC6-209ENST00000489535 SHPRHQ149N8 1683 aa10.46□□□□□ -0.74
SMC6-209ENST00000489535 BRD4O60885 1362 aaPredicted RBP10.45□□□□□ -0.74
SMC6-209ENST00000489535 CENPBP07199 599 aaPredicted RBP10.45□□□□□ -0.74
SMC6-209ENST00000489535 ATP4AP20648 1035 aa10.45□□□□□ -0.74
SMC6-209ENST00000489535 CCDC85AQ96PX6 553 aaPredicted RBP10.45□□□□□ -0.74
SMC6-209ENST00000489535 NKTRP30414 1462 aaKnown RBP10.44□□□□□ -0.74
SMC6-209ENST00000489535 MYCP01106 439 aaPredicted RBP10.44□□□□□ -0.74
SMC6-209ENST00000489535 HSPA2P54652 639 aa10.44□□□□□ -0.74
SMC6-209ENST00000489535 ESCO1Q5FWF5 840 aa10.44□□□□□ -0.74
SMC6-209ENST00000489535 HDGFL2Q7Z4V5 671 aaPredicted RBP10.44□□□□□ -0.74
SMC6-209ENST00000489535 NLRP8Q86W28 1048 aa10.44□□□□□ -0.74
SMC6-209ENST00000489535 NUDT16Q96DE0 195 aaKnown RBP10.44□□□□□ -0.74
SMC6-209ENST00000489535 TERF2IPQ9NYB0 399 aa10.44□□□□□ -0.74
SMC6-209ENST00000489535 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
SMC6-209ENST00000489535 PRR36Q9H6K5 1346 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 ATXN7O15265 892 aaPredicted RBP10.43□□□□□ -0.74
SMC6-209ENST00000489535 CD33P20138 364 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 TNP2Q05952 138 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 TMEM259Q4ZIN3 620 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 TBC1D9Q6ZT07 1266 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 NLRP13Q86W25 1043 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 CABP1Q9NZU7 370 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 USP54Q70EL1 1684 aa10.43□□□□□ -0.74
SMC6-209ENST00000489535 NSD2O96028 1365 aa10.42□□□□□ -0.74
SMC6-209ENST00000489535 CGNL1Q0VF96 1302 aa10.42□□□□□ -0.74
SMC6-209ENST00000489535 KIF1AQ12756 1690 aa10.42□□□□□ -0.74
SMC6-209ENST00000489535 GPR37L1O60883 481 aa10.42□□□□□ -0.74
SMC6-209ENST00000489535 STAU1O95793 577 aaKnown RBP10.42□□□□□ -0.74
SMC6-209ENST00000489535 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
SMC6-209ENST00000489535 PLA2G4AP47712 749 aa10.42□□□□□ -0.74
SMC6-209ENST00000489535 FAM9BQ8IZU0 186 aa10.42□□□□□ -0.74
SMC6-209ENST00000489535 ETNK1Q9HBU6 452 aa10.42□□□□□ -0.74
SMC6-209ENST00000489535 CPSF1Q10570 1443 aaKnown RBP10.41□□□□□ -0.74
SMC6-209ENST00000489535 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
SMC6-209ENST00000489535 DCDC2BA2VCK2 349 aa10.41□□□□□ -0.74
SMC6-209ENST00000489535 ZNF330Q9Y3S2 320 aaPredicted RBP10.41□□□□□ -0.74
SMC6-209ENST00000489535 LTN1O94822 1766 aa10.41□□□□□ -0.74
SMC6-209ENST00000489535 EDC4Q6P2E9 1401 aaKnown RBP10.41□□□□□ -0.74
SMC6-209ENST00000489535 ANKARQ7Z5J8 1434 aa10.41□□□□□ -0.74
SMC6-209ENST00000489535 PIK3C2AO00443 1686 aa10.41□□□□□ -0.74
SMC6-209ENST00000489535 PPP2R1AP30153 589 aa10.4□□□□□ -0.74
SMC6-209ENST00000489535 PCBP4P57723 403 aaKnown RBP10.4□□□□□ -0.74
SMC6-209ENST00000489535 TLR1Q15399 786 aa10.4□□□□□ -0.74
SMC6-209ENST00000489535 PRSS36Q5K4E3 855 aa10.4□□□□□ -0.74
SMC6-209ENST00000489535 ZNF468Q5VIY5 522 aaPredicted RBP10.4□□□□□ -0.74
SMC6-209ENST00000489535 C1orf216Q8TAB5 229 aa10.4□□□□□ -0.74
SMC6-209ENST00000489535 KRTAP4-7Q9BYR0 210 aa10.4□□□□□ -0.74
SMC6-209ENST00000489535 MORC1Q86VD1 984 aa10.39□□□□□ -0.75
SMC6-209ENST00000489535 TRPM3Q9HCF6 1732 aaPredicted RBP10.38□□□□□ -0.75
SMC6-209ENST00000489535 NBPF11Q86T75 865 aa10.38□□□□□ -0.75
SMC6-209ENST00000489535 MDFIQ99750 246 aa10.37□□□□□ -0.75
SMC6-209ENST00000489535 CEP126Q9P2H0 1117 aa10.37□□□□□ -0.75
SMC6-209ENST00000489535 DLG5Q8TDM6 1919 aa10.37□□□□□ -0.75
SMC6-209ENST00000489535 ACEP12821 1306 aa10.36□□□□□ -0.75
SMC6-209ENST00000489535 USP6P35125 1406 aa10.36□□□□□ -0.75
SMC6-209ENST00000489535 SPDYE3A6NKU9 549 aa10.36□□□□□ -0.75
SMC6-209ENST00000489535 KHNYNO15037 678 aaKnown RBP10.36□□□□□ -0.75
SMC6-209ENST00000489535 HNRNPUQ00839 825 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMC6-209ENST00000489535 PRRT3Q5FWE3 981 aa10.36□□□□□ -0.75
SMC6-209ENST00000489535 C14orf37Q86TY3 774 aa10.36□□□□□ -0.75
SMC6-209ENST00000489535 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
SMC6-209ENST00000489535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMC6-209ENST00000489535 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
SMC6-209ENST00000489535 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
SMC6-209ENST00000489535 A0A1W2PNR3 127 aa10.35□□□□□ -0.75
SMC6-209ENST00000489535 FYB1O15117 783 aa10.35□□□□□ -0.75
SMC6-209ENST00000489535 APBA3O96018 575 aa10.35□□□□□ -0.75
SMC6-209ENST00000489535 TNNT2P45379 298 aaPredicted RBP10.35□□□□□ -0.75
SMC6-209ENST00000489535 PMFBP1Q8TBY8 1022 aa10.35□□□□□ -0.75
SMC6-209ENST00000489535 POLR3AO14802 1390 aaPredicted RBP10.35□□□□□ -0.75
SMC6-209ENST00000489535 RGPD5Q99666 1765 aa10.34□□□□□ -0.75
SMC6-209ENST00000489535 PEAK1Q9H792 1746 aa10.34□□□□□ -0.75
SMC6-209ENST00000489535 FAM157BP0CG42 384 aa10.34□□□□□ -0.75
SMC6-209ENST00000489535 COL9A3Q14050 684 aaPredicted RBP10.34□□□□□ -0.75
SMC6-209ENST00000489535 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
SMC6-209ENST00000489535 ALS2Q96Q42 1657 aa10.34□□□□□ -0.75
SMC6-209ENST00000489535 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
SMC6-209ENST00000489535 ELOA3DA6NLF2 546 aaPredicted RBP10.33□□□□□ -0.76
SMC6-209ENST00000489535 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
SMC6-209ENST00000489535 TSGA10IPQ3SY00 556 aa10.33□□□□□ -0.76
SMC6-209ENST00000489535 ELOA3BQ3SY89 546 aa10.33□□□□□ -0.76
SMC6-209ENST00000489535 ELOA3Q8NG57 546 aa10.33□□□□□ -0.76
SMC6-209ENST00000489535 PRR12Q9ULL5 1215 aa10.33□□□□□ -0.76
SMC6-209ENST00000489535 VIRMAQ69YN4 1812 aaKnown RBP10.33□□□□□ -0.76
SMC6-209ENST00000489535 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
SMC6-209ENST00000489535 BLMP54132 1417 aaPredicted RBP10.33□□□□□ -0.76
SMC6-209ENST00000489535 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
SMC6-209ENST00000489535 RGPD2P0DJD1 1756 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 TMEM94Q12767 1356 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 LRP8Q14114 963 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 WDR43Q15061 677 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMC6-209ENST00000489535 NME9Q86XW9 330 aa10.32□□□□□ -0.76
SMC6-209ENST00000489535 NGDNQ8NEJ9 315 aaKnown RBP10.32□□□□□ -0.76
SMC6-209ENST00000489535 AIDAQ96BJ3 306 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms