RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 LMOD1P29536 600 aaPredicted RBP15.32■□□□□ 0.04
SMARCD3-213ENST00000489503 C20orf194Q5TEA3 1177 aa15.32■□□□□ 0.04
SMARCD3-213ENST00000489503 RBM46Q8TBY0 533 aaKnown RBP15.32■□□□□ 0.04
SMARCD3-213ENST00000489503 MXD3Q9BW11 206 aa15.32■□□□□ 0.04
SMARCD3-213ENST00000489503 PNMA6EA0A0J9YXQ4 647 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 EYA2O00167 538 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 SRGAP3O43295 1099 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 TNIP1Q15025 636 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 ATG9AQ7Z3C6 839 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 VGLL2Q8N8G2 317 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 GPRC5DQ9NZD1 345 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 MROH5Q6ZUA9 1318 aa15.31■□□□□ 0.04
SMARCD3-213ENST00000489503 MICALL2Q8IY33 904 aa15.3■□□□□ 0.04
SMARCD3-213ENST00000489503 TRPM4Q8TD43 1214 aa15.3■□□□□ 0.04
SMARCD3-213ENST00000489503 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
SMARCD3-213ENST00000489503 JAG2Q9Y219 1238 aa15.3■□□□□ 0.04
SMARCD3-213ENST00000489503 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
SMARCD3-213ENST00000489503 GYG1P46976 350 aa15.29■□□□□ 0.04
SMARCD3-213ENST00000489503 MTX1Q13505 466 aa15.29■□□□□ 0.04
SMARCD3-213ENST00000489503 SMC1BQ8NDV3 1235 aa15.29■□□□□ 0.04
SMARCD3-213ENST00000489503 COA1Q9GZY4 146 aa15.29■□□□□ 0.04
SMARCD3-213ENST00000489503 USP17L3A6NCW0 530 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 USP17L4A6NCW7 530 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 EGFRP00533 1210 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 UBE4AQ14139 1066 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 MVPQ14764 893 aaKnown RBP15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 C15orf52Q6ZUT6 534 aaKnown RBP15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 USP17L1Q7RTZ2 530 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 PODNQ7Z5L7 613 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 CNOT7Q9UIV1 285 aaKnown RBP15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
SMARCD3-213ENST00000489503 ARAP2Q8WZ64 1704 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 PDE8BO95263 885 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 GTF2IP78347 998 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 DACT2Q5SW24 774 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 MAP1SQ66K74 1059 aaPredicted RBP15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 SAMD7Q7Z3H4 446 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 ZNF804AQ7Z570 1209 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 LDHDQ86WU2 507 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 COPRSQ9NQ92 184 aa15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 ADARB2Q9NS39 739 aaKnown RBP15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 IQSEC3Q9UPP2 1182 aaPredicted RBP15.27■□□□□ 0.04
SMARCD3-213ENST00000489503 CIAO1O76071 339 aa15.26■□□□□ 0.03
SMARCD3-213ENST00000489503 FSTL1Q12841 308 aa15.26■□□□□ 0.03
SMARCD3-213ENST00000489503 PUM3Q15397 648 aaKnown RBP15.26■□□□□ 0.03
SMARCD3-213ENST00000489503 TBC1D10BQ4KMP7 808 aaPredicted RBP15.26■□□□□ 0.03
SMARCD3-213ENST00000489503 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
SMARCD3-213ENST00000489503 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.26■□□□□ 0.03
SMARCD3-213ENST00000489503 ZNF609O15014 1411 aa15.26■□□□□ 0.03
SMARCD3-213ENST00000489503 MS4A1P11836 297 aa15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 HSPA6P17066 643 aa15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 FGFR2P21802 821 aa15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 RPS12P25398 132 aaKnown RBP15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 HIRAP54198 1017 aaPredicted RBP15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 HTRA3P83110 453 aa15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 PNMA8AQ86V59 439 aaPredicted RBP15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 FAM84BQ96KN1 310 aaPredicted RBP15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 GMLQ99445 158 aa15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
SMARCD3-213ENST00000489503 H7C1D1 291 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 IL1R1P14778 569 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 HIBADHP31937 336 aaKnown RBP15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 IL15P40933 162 aaPredicted RBP15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 POLA2Q14181 598 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 STRIP1Q5VSL9 837 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 TTLL5Q6EMB2 1281 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 CEP85Q6P2H3 762 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 USP50Q70EL3 339 aaPredicted RBP15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 DPF2Q92785 391 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 CEP126Q9P2H0 1117 aa15.24■□□□□ 0.03
SMARCD3-213ENST00000489503 ASTN2O75129 1339 aaPredicted RBP15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 COL1A1P02452 1464 aaPredicted RBP15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 SLC5A1P13866 664 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 ADORA1P30542 326 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 BCAMP50895 628 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 ATP8B2P98198 1209 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 TFCP2Q12800 502 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 CHAF1AQ13111 956 aaPredicted RBP15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 KIF4BQ2VIQ3 1234 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 AGBL3Q8NEM8 1001 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 DDX19BQ9UMR2 479 aa15.23■□□□□ 0.03
SMARCD3-213ENST00000489503 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
SMARCD3-213ENST00000489503 IFIT1P09914 478 aaKnown RBP15.22■□□□□ 0.03
SMARCD3-213ENST00000489503 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
SMARCD3-213ENST00000489503 VPS37DQ86XT2 251 aa15.22■□□□□ 0.03
SMARCD3-213ENST00000489503 KIAA0825Q8IV33 1275 aa15.22■□□□□ 0.03
SMARCD3-213ENST00000489503 TDRD7Q8NHU6 1098 aaKnown RBP15.22■□□□□ 0.03
SMARCD3-213ENST00000489503 SSH3Q8TE77 659 aa15.22■□□□□ 0.03
SMARCD3-213ENST00000489503 TRAF5O00463 557 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms