RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 SCAF8Q9UPN6 1271 aaKnown RBP10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.72
EXOSC3-206ENST00000489414 TESPA1A2RU30 521 aaPredicted RBP10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 FAM86C2PA6NEL3 165 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 SMIM22K7EJ46 135 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 LACTBP83111 547 aaPredicted RBP10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 ARMC9Q7Z3E5 817 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 NECAB2Q7Z6G3 386 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 DIS3LQ8TF46 1054 aaKnown RBP10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 RPGRQ92834 1020 aaKnown RBP10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 UNC93B1Q9H1C4 597 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 ATP6V0A2Q9Y487 856 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 RIPOR2Q9Y4F9 1068 aa10.57□□□□□ -0.72
EXOSC3-206ENST00000489414 NF2P35240 595 aa10.56□□□□□ -0.72
EXOSC3-206ENST00000489414 UBXN2AP68543 259 aa10.56□□□□□ -0.72
EXOSC3-206ENST00000489414 PLEKHO1Q53GL0 409 aaPredicted RBP10.56□□□□□ -0.72
EXOSC3-206ENST00000489414 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
EXOSC3-206ENST00000489414 LAMB2P55268 1798 aa10.56□□□□□ -0.72
EXOSC3-206ENST00000489414 DUOX1Q9NRD9 1551 aa10.56□□□□□ -0.72
EXOSC3-206ENST00000489414 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 RTL9Q8NET4 1388 aa10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 REV3LO60673 3130 aa10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 FYB1O15117 783 aa10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 MDM2Q00987 491 aaPredicted RBP10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 DZIP3Q86Y13 1208 aaKnown RBP10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 ZNF496Q96IT1 587 aaPredicted RBP10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 GGNBP2Q9H3C7 697 aa10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 SLC52A2Q9HAB3 445 aa10.55□□□□□ -0.72
EXOSC3-206ENST00000489414 TFRCP02786 760 aaKnown RBP10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 BMP1P13497 986 aa10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 ZNF280AP59817 542 aaPredicted RBP10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 KIF22Q14807 665 aa10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 DPP8Q6V1X1 898 aaPredicted RBP10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 DDX60Q8IY21 1712 aaKnown RBP10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 SLC10A4Q96EP9 437 aa10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 TRIM47Q96LD4 638 aa10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 FBXL18Q96ME1 805 aa10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 TMX4Q9H1E5 349 aaPredicted RBP10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 SRRDQ9UH36 339 aa10.54□□□□□ -0.72
EXOSC3-206ENST00000489414 CHD6Q8TD26 2715 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 FAM177BA6PVY3 158 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 C1orf141Q5JVX7 400 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 ERMP1Q7Z2K6 904 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 RAET1EQ8TD07 263 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 RBM17Q96I25 401 aaKnown RBP10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 KCNH6Q9H252 994 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 ZFYVE28Q9HCC9 887 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 NIP7Q9Y221 180 aaKnown RBP eCLIP10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 ZNF652Q9Y2D9 606 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 SCN9AQ15858 1988 aa10.53□□□□□ -0.72
EXOSC3-206ENST00000489414 PRR33A8MZF0 331 aa10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 ITGB8P26012 769 aa10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 GJA5P36382 358 aa10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 SMAD3P84022 425 aaKnown RBP10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 PRKG1Q13976 671 aa10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 TAF1CQ15572 869 aaPredicted RBP10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 CLMNQ96JQ2 1002 aa10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 DEFB118Q96PH6 123 aa10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 ANGEL1Q9UNK9 670 aaKnown RBP10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 DNAH12Q6ZR08 3092 aa10.52□□□□□ -0.73
EXOSC3-206ENST00000489414 DDX60LQ5H9U9 1706 aaKnown RBP10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 GTF2E1P29083 439 aaPredicted RBP10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 CTGFP29279 349 aa10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 GRIN2CQ14957 1233 aa10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 NPM2Q86SE8 214 aaKnown RBP10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 DBNDD1Q9H9R9 158 aa10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 KCNQ5Q9NR82 932 aa10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 BIN2Q9UBW5 565 aaPredicted RBP10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 KIF20BQ96Q89 1820 aa10.51□□□□□ -0.73
EXOSC3-206ENST00000489414 TPRP12270 2363 aaKnown RBP10.5□□□□□ -0.73
EXOSC3-206ENST00000489414 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
EXOSC3-206ENST00000489414 ANKLE1Q8NAG6 615 aa10.5□□□□□ -0.73
EXOSC3-206ENST00000489414 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
EXOSC3-206ENST00000489414 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
EXOSC3-206ENST00000489414 FZD1Q9UP38 647 aa10.5□□□□□ -0.73
EXOSC3-206ENST00000489414 ADGRA2Q96PE1 1338 aa10.5□□□□□ -0.73
EXOSC3-206ENST00000489414 ZNF318Q5VUA4 2279 aa10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 VIL1P09327 827 aaKnown RBP10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 OSBPP22059 807 aa10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 COL9A2Q14055 689 aaPredicted RBP10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 AKNAD1Q5T1N1 836 aa10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 PPM1EQ8WY54 764 aa10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 SETXQ7Z333 2677 aaKnown RBP10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 MYO15AQ9UKN7 3530 aa10.49□□□□□ -0.73
EXOSC3-206ENST00000489414 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 TLR2O60603 784 aa10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 A1BGP04217 495 aa10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 SLAIN1Q8ND83 568 aa10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 MYOZ2Q9NPC6 264 aa10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 MYPNQ86TC9 1320 aa10.48□□□□□ -0.73
EXOSC3-206ENST00000489414 ANKRD11Q6UB99 2663 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms