RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 INTS3Q68E01 1043 aaKnown RBP30.08■■■□□ 2.41
PTPN18-213ENST00000489215 ANKRD44Q8N8A2 993 aa30.08■■■□□ 2.41
PTPN18-213ENST00000489215 KLRG1Q96E93 195 aa30.08■■■□□ 2.41
PTPN18-213ENST00000489215 STRIP1Q5VSL9 837 aa30.07■■■□□ 2.4
PTPN18-213ENST00000489215 ATF7IPQ6VMQ6 1270 aa30.07■■■□□ 2.4
PTPN18-213ENST00000489215 HELBQ8NG08 1087 aaPredicted RBP30.07■■■□□ 2.4
PTPN18-213ENST00000489215 TMEM88BA6NKF7 163 aa30.06■■■□□ 2.4
PTPN18-213ENST00000489215 UBE4AQ14139 1066 aa30.06■■■□□ 2.4
PTPN18-213ENST00000489215 ZNF804AQ7Z570 1209 aa30.06■■■□□ 2.4
PTPN18-213ENST00000489215 CEP350Q5VT06 3117 aa30.05■■■□□ 2.4
PTPN18-213ENST00000489215 PLIN1O60240 522 aa30.05■■■□□ 2.4
PTPN18-213ENST00000489215 GNAI3P08754 354 aa30.05■■■□□ 2.4
PTPN18-213ENST00000489215 HTRA3P83110 453 aa30.05■■■□□ 2.4
PTPN18-213ENST00000489215 TXNRD3Q86VQ6 643 aa30.05■■■□□ 2.4
PTPN18-213ENST00000489215 FRAT1Q92837 279 aaPredicted RBP30.05■■■□□ 2.4
PTPN18-213ENST00000489215 RIPOR2Q9Y4F9 1068 aa30.05■■■□□ 2.4
PTPN18-213ENST00000489215 BCAR3O75815 825 aa30.04■■■□□ 2.4
PTPN18-213ENST00000489215 A0A1B0GUL6 1792 aa30.04■■■□□ 2.4
PTPN18-213ENST00000489215 USP17L8P0C7I0 530 aa30.03■■■□□ 2.4
PTPN18-213ENST00000489215 HIRAP54198 1017 aaPredicted RBP30.03■■■□□ 2.4
PTPN18-213ENST00000489215 TTLL5Q6EMB2 1281 aa30.03■■■□□ 2.4
PTPN18-213ENST00000489215 CDC37L1Q7L3B6 337 aa30.03■■■□□ 2.4
PTPN18-213ENST00000489215 CD209Q9NNX6 404 aa30.03■■■□□ 2.4
PTPN18-213ENST00000489215 ZNF280AP59817 542 aaPredicted RBP30.02■■■□□ 2.4
PTPN18-213ENST00000489215 ZKSCAN2Q63HK3 967 aa30.02■■■□□ 2.4
PTPN18-213ENST00000489215 SAMD7Q7Z3H4 446 aa30.02■■■□□ 2.4
PTPN18-213ENST00000489215 OGFOD1Q8N543 542 aa30.02■■■□□ 2.4
PTPN18-213ENST00000489215 TRPM4Q8TD43 1214 aa30.02■■■□□ 2.4
PTPN18-213ENST00000489215 GMLQ99445 158 aa30.02■■■□□ 2.4
PTPN18-213ENST00000489215 TRIM27P14373 513 aa30.01■■■□□ 2.39
PTPN18-213ENST00000489215 DACT2Q5SW24 774 aa30.01■■■□□ 2.39
PTPN18-213ENST00000489215 FBXO3Q9UK99 471 aa30.01■■■□□ 2.39
PTPN18-213ENST00000489215 KIF4BQ2VIQ3 1234 aa30■■■□□ 2.39
PTPN18-213ENST00000489215 TBC1D10BQ4KMP7 808 aaPredicted RBP30■■■□□ 2.39
PTPN18-213ENST00000489215 FBXW7Q969H0 707 aa30■■■□□ 2.39
PTPN18-213ENST00000489215 PUS3Q9BZE2 481 aaKnown RBP30■■■□□ 2.39
PTPN18-213ENST00000489215 IRS2Q9Y4H2 1338 aa29.99■■■□□ 2.39
PTPN18-213ENST00000489215 SHTN1A0MZ66 631 aa29.99■■■□□ 2.39
PTPN18-213ENST00000489215 IL1R1P14778 569 aa29.99■■■□□ 2.39
PTPN18-213ENST00000489215 KLRK1P26718 216 aa29.99■■■□□ 2.39
PTPN18-213ENST00000489215 METTL24Q5JXM2 366 aa29.99■■■□□ 2.39
PTPN18-213ENST00000489215 RBM26Q5T8P6 1007 aaKnown RBP29.99■■■□□ 2.39
PTPN18-213ENST00000489215 DCPSQ96C86 337 aaKnown RBP29.99■■■□□ 2.39
PTPN18-213ENST00000489215 JMYQ8N9B5 988 aa29.98■■■□□ 2.39
PTPN18-213ENST00000489215 SNAP23O00161 211 aa29.97■■■□□ 2.39
PTPN18-213ENST00000489215 PDE8BO95263 885 aa29.97■■■□□ 2.39
PTPN18-213ENST00000489215 GTF2IP78347 998 aa29.97■■■□□ 2.39
PTPN18-213ENST00000489215 HDAC9Q9UKV0 1011 aa29.97■■■□□ 2.39
PTPN18-213ENST00000489215 TRPM7Q96QT4 1865 aa29.97■■■□□ 2.39
PTPN18-213ENST00000489215 LRRC24Q50LG9 513 aa29.96■■■□□ 2.39
PTPN18-213ENST00000489215 MEIS3Q99687 375 aa29.96■■■□□ 2.39
PTPN18-213ENST00000489215 MYOZ2Q9NPC6 264 aa29.96■■■□□ 2.39
PTPN18-213ENST00000489215 LRRFIP2Q9Y608 721 aaKnown RBP29.96■■■□□ 2.39
PTPN18-213ENST00000489215 EYA2O00167 538 aa29.95■■■□□ 2.39
PTPN18-213ENST00000489215 HIBADHP31937 336 aaKnown RBP29.95■■■□□ 2.39
PTPN18-213ENST00000489215 FKBP1AP62942 108 aaKnown RBP29.95■■■□□ 2.39
PTPN18-213ENST00000489215 SASH1O94885 1247 aa29.94■■■□□ 2.38
PTPN18-213ENST00000489215 RFX5P48382 616 aaPredicted RBP29.94■■■□□ 2.38
PTPN18-213ENST00000489215 PTPN12Q05209 780 aaKnown RBP29.94■■■□□ 2.38
PTPN18-213ENST00000489215 CAVIN4Q5BKX8 364 aa29.94■■■□□ 2.38
PTPN18-213ENST00000489215 VPS37DQ86XT2 251 aa29.93■■■□□ 2.38
PTPN18-213ENST00000489215 CLUAP1Q96AJ1 413 aa29.93■■■□□ 2.38
PTPN18-213ENST00000489215 GLIS2Q9BZE0 524 aaPredicted RBP29.93■■■□□ 2.38
PTPN18-213ENST00000489215 CIAO1O76071 339 aa29.92■■■□□ 2.38
PTPN18-213ENST00000489215 EGFRP00533 1210 aa29.92■■■□□ 2.38
PTPN18-213ENST00000489215 KRT26Q7Z3Y9 468 aa29.92■■■□□ 2.38
PTPN18-213ENST00000489215 FTSJ3Q8IY81 847 aaKnown RBP29.92■■■□□ 2.38
PTPN18-213ENST00000489215 KLHDC4Q8TBB5 520 aa29.92■■■□□ 2.38
PTPN18-213ENST00000489215 ABT1Q9ULW3 272 aaKnown RBP29.92■■■□□ 2.38
PTPN18-213ENST00000489215 CNTNAP1P78357 1384 aa29.91■■■□□ 2.38
PTPN18-213ENST00000489215 TRAF5O00463 557 aa29.91■■■□□ 2.38
PTPN18-213ENST00000489215 DEFB115Q30KQ5 88 aa29.91■■■□□ 2.38
PTPN18-213ENST00000489215 SULF1Q8IWU6 871 aa29.91■■■□□ 2.38
PTPN18-213ENST00000489215 VGLL2Q8N8G2 317 aa29.91■■■□□ 2.38
PTPN18-213ENST00000489215 FAM84BQ96KN1 310 aaPredicted RBP29.91■■■□□ 2.38
PTPN18-213ENST00000489215 ZNF646O15015 1829 aaPredicted RBP29.9■■■□□ 2.38
PTPN18-213ENST00000489215 GNAI2P04899 355 aa29.9■■■□□ 2.38
PTPN18-213ENST00000489215 IFIT1P09914 478 aaKnown RBP29.9■■■□□ 2.38
PTPN18-213ENST00000489215 SCARF1Q14162 830 aa29.9■■■□□ 2.38
PTPN18-213ENST00000489215 PUM3Q15397 648 aaKnown RBP29.9■■■□□ 2.38
PTPN18-213ENST00000489215 USP48Q86UV5 1035 aa29.9■■■□□ 2.38
PTPN18-213ENST00000489215 TDRD7Q8NHU6 1098 aaKnown RBP29.9■■■□□ 2.38
PTPN18-213ENST00000489215 MKRN1Q9UHC7 482 aaKnown RBP29.9■■■□□ 2.38
PTPN18-213ENST00000489215 PITPNM2Q9BZ72 1349 aa29.9■■■□□ 2.38
PTPN18-213ENST00000489215 POLR2AP24928 1970 aaKnown RBP29.9■■■□□ 2.38
PTPN18-213ENST00000489215 RASSF10A6NK89 507 aa29.89■■■□□ 2.38
PTPN18-213ENST00000489215 MS4A1P11836 297 aa29.89■■■□□ 2.38
PTPN18-213ENST00000489215 CST9Q5W186 159 aa29.89■■■□□ 2.38
PTPN18-213ENST00000489215 DZIP1LQ8IYY4 767 aaKnown RBP29.89■■■□□ 2.38
PTPN18-213ENST00000489215 COPRSQ9NQ92 184 aa29.89■■■□□ 2.38
PTPN18-213ENST00000489215 CELF2O95319 508 aaKnown RBP29.88■■■□□ 2.37
PTPN18-213ENST00000489215 IL15P40933 162 aaPredicted RBP29.88■■■□□ 2.37
PTPN18-213ENST00000489215 GYG1P46976 350 aa29.88■■■□□ 2.37
PTPN18-213ENST00000489215 MTX1Q13505 466 aa29.88■■■□□ 2.37
PTPN18-213ENST00000489215 MXD3Q9BW11 206 aa29.88■■■□□ 2.37
PTPN18-213ENST00000489215 GGA3Q9NZ52 723 aa29.88■■■□□ 2.37
PTPN18-213ENST00000489215 CEP126Q9P2H0 1117 aa29.88■■■□□ 2.37
PTPN18-213ENST00000489215 FAM205AQ6ZU69 1335 aa29.88■■■□□ 2.37
PTPN18-213ENST00000489215 FBXO33Q7Z6M2 555 aa29.87■■■□□ 2.37
PTPN18-213ENST00000489215 KIAA0825Q8IV33 1275 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms