RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ARMC9Q7Z3E5 817 aa21■□□□□ 0.95
USP48-210ENST00000489108 OGFOD1Q8N543 542 aa21■□□□□ 0.95
USP48-210ENST00000489108 CCDC191Q8NCU4 936 aa20.99■□□□□ 0.95
USP48-210ENST00000489108 FBXW7Q969H0 707 aa20.99■□□□□ 0.95
USP48-210ENST00000489108 POTEFA5A3E0 1075 aa20.98■□□□□ 0.95
USP48-210ENST00000489108 SASH1O94885 1247 aa20.98■□□□□ 0.95
USP48-210ENST00000489108 LDLRAD1Q5T700 205 aa20.98■□□□□ 0.95
USP48-210ENST00000489108 SPRYD7Q5W111 196 aa20.98■□□□□ 0.95
USP48-210ENST00000489108 TRIM17Q9Y577 477 aa20.98■□□□□ 0.95
USP48-210ENST00000489108 CWC25Q9NXE8 425 aaPredicted RBP20.97■□□□□ 0.95
USP48-210ENST00000489108 ANGEL1Q9UNK9 670 aaKnown RBP20.97■□□□□ 0.95
USP48-210ENST00000489108 MINPP1Q9UNW1 487 aa20.97■□□□□ 0.95
USP48-210ENST00000489108 FZD1Q9UP38 647 aa20.97■□□□□ 0.95
USP48-210ENST00000489108 MKI67P46013 3256 aaKnown RBP20.96■□□□□ 0.95
USP48-210ENST00000489108 STRIP1Q5VSL9 837 aa20.96■□□□□ 0.95
USP48-210ENST00000489108 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.96■□□□□ 0.95
USP48-210ENST00000489108 MED23Q9ULK4 1368 aa20.96■□□□□ 0.95
USP48-210ENST00000489108 ZNF646O15015 1829 aaPredicted RBP20.95■□□□□ 0.94
USP48-210ENST00000489108 ALDH1A1P00352 501 aa20.95■□□□□ 0.94
USP48-210ENST00000489108 OTOP1Q7RTM1 612 aa20.95■□□□□ 0.94
USP48-210ENST00000489108 TXNRD3Q86VQ6 643 aa20.95■□□□□ 0.94
USP48-210ENST00000489108 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
USP48-210ENST00000489108 CDC5LQ99459 802 aaKnown RBP20.95■□□□□ 0.94
USP48-210ENST00000489108 MBIPQ9NS73 344 aa20.95■□□□□ 0.94
USP48-210ENST00000489108 MYO3BQ8WXR4 1341 aa20.95■□□□□ 0.94
USP48-210ENST00000489108 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
USP48-210ENST00000489108 CCT4P50991 539 aaKnown RBP20.94■□□□□ 0.94
USP48-210ENST00000489108 INTS3Q68E01 1043 aaKnown RBP20.94■□□□□ 0.94
USP48-210ENST00000489108 IFNL1Q8IU54 200 aa20.94■□□□□ 0.94
USP48-210ENST00000489108 SLC10A4Q96EP9 437 aa20.94■□□□□ 0.94
USP48-210ENST00000489108 COA1Q9GZY4 146 aa20.94■□□□□ 0.94
USP48-210ENST00000489108 BSDC1Q9NW68 430 aaPredicted RBP20.94■□□□□ 0.94
USP48-210ENST00000489108 INHBEP58166 350 aa20.93■□□□□ 0.94
USP48-210ENST00000489108 TTLL5Q6EMB2 1281 aa20.93■□□□□ 0.94
USP48-210ENST00000489108 APOBEC3FQ8IUX4 373 aaKnown RBP20.93■□□□□ 0.94
USP48-210ENST00000489108 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
USP48-210ENST00000489108 MANSC4A6NHS7 340 aaPredicted RBP20.92■□□□□ 0.94
USP48-210ENST00000489108 MMP14P50281 582 aa20.92■□□□□ 0.94
USP48-210ENST00000489108 CTSWP56202 376 aa20.92■□□□□ 0.94
USP48-210ENST00000489108 RALBP1Q15311 655 aa20.92■□□□□ 0.94
USP48-210ENST00000489108 KIAA0825Q8IV33 1275 aa20.92■□□□□ 0.94
USP48-210ENST00000489108 TTLL11Q8NHH1 800 aa20.92■□□□□ 0.94
USP48-210ENST00000489108 ZBED3Q96IU2 234 aaPredicted RBP20.92■□□□□ 0.94
USP48-210ENST00000489108 GREM2Q9H772 168 aa20.92■□□□□ 0.94
USP48-210ENST00000489108 HTTP42858 3142 aa20.91■□□□□ 0.94
USP48-210ENST00000489108 KIAA0100Q14667 2235 aaKnown RBP20.91■□□□□ 0.94
USP48-210ENST00000489108 SPEF2Q9C093 1822 aa20.91■□□□□ 0.94
USP48-210ENST00000489108 IGF2BP3O00425 579 aaKnown RBP eCLIP20.9■□□□□ 0.94
USP48-210ENST00000489108 CLMNQ96JQ2 1002 aa20.9■□□□□ 0.94
USP48-210ENST00000489108 DEFB129Q9H1M3 183 aa20.9■□□□□ 0.94
USP48-210ENST00000489108 PTPN22Q9Y2R2 807 aa20.9■□□□□ 0.94
USP48-210ENST00000489108 CENPFP49454 3210 aa20.89■□□□□ 0.94
USP48-210ENST00000489108 ZNF853P0CG23 659 aa20.89■□□□□ 0.93
USP48-210ENST00000489108 EN2P19622 333 aaPredicted RBP20.89■□□□□ 0.93
USP48-210ENST00000489108 GTF2IP78347 998 aa20.89■□□□□ 0.93
USP48-210ENST00000489108 WNK4Q96J92 1243 aa20.89■□□□□ 0.93
USP48-210ENST00000489108 MAP3K2Q9Y2U5 619 aa20.89■□□□□ 0.93
USP48-210ENST00000489108 LEMD3Q9Y2U8 911 aa20.89■□□□□ 0.93
USP48-210ENST00000489108 KLRK1P26718 216 aa20.88■□□□□ 0.93
USP48-210ENST00000489108 MAP3K11Q16584 847 aa20.88■□□□□ 0.93
USP48-210ENST00000489108 CD99L2Q8TCZ2 262 aa20.88■□□□□ 0.93
USP48-210ENST00000489108 ERO1AQ96HE7 468 aa20.88■□□□□ 0.93
USP48-210ENST00000489108 ADAMTS8Q9UP79 889 aa20.88■□□□□ 0.93
USP48-210ENST00000489108 DDX58O95786 925 aaKnown RBP20.87■□□□□ 0.93
USP48-210ENST00000489108 IGKV5-2P06315 115 aa20.87■□□□□ 0.93
USP48-210ENST00000489108 ZBTB48P10074 688 aaPredicted RBP20.87■□□□□ 0.93
USP48-210ENST00000489108 FXR1P51114 621 aaKnown RBP eCLIP20.87■□□□□ 0.93
USP48-210ENST00000489108 MYH3P11055 1940 aa20.86■□□□□ 0.93
USP48-210ENST00000489108 ZNF804BA4D1E1 1349 aa20.86■□□□□ 0.93
USP48-210ENST00000489108 PPP1R12BO60237 982 aaPredicted RBP20.86■□□□□ 0.93
USP48-210ENST00000489108 WDR43Q15061 677 aaKnown RBP eCLIP20.86■□□□□ 0.93
USP48-210ENST00000489108 DLGAP5Q15398 846 aa20.86■□□□□ 0.93
USP48-210ENST00000489108 C8orf58Q8NAV2 365 aa20.86■□□□□ 0.93
USP48-210ENST00000489108 RBBP6Q7Z6E9 1792 aaKnown RBP20.85■□□□□ 0.93
USP48-210ENST00000489108 CRHR2Q13324 411 aa20.85■□□□□ 0.93
USP48-210ENST00000489108 ARMC5Q96C12 935 aa20.85■□□□□ 0.93
USP48-210ENST00000489108 EFCC1Q9HA90 598 aa20.85■□□□□ 0.93
USP48-210ENST00000489108 PCDHAC2Q9Y5I4 1007 aa20.85■□□□□ 0.93
USP48-210ENST00000489108 GJA5P36382 358 aa20.84■□□□□ 0.93
USP48-210ENST00000489108 IGHMBP2P38935 993 aaKnown RBP20.84■□□□□ 0.93
USP48-210ENST00000489108 CAP1Q01518 475 aa20.84■□□□□ 0.93
USP48-210ENST00000489108 KSR2Q6VAB6 950 aa20.84■□□□□ 0.93
USP48-210ENST00000489108 SSC5DA1L4H1 1573 aa20.84■□□□□ 0.93
USP48-210ENST00000489108 COL1A1P02452 1464 aaPredicted RBP20.83■□□□□ 0.93
USP48-210ENST00000489108 PI4KAP2A4QPH2 592 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 OTUD7BQ6GQQ9 843 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 CERS5Q8N5B7 392 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 PI4KAP1Q8N8J0 262 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 ANKRD2Q9GZV1 360 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 CD209Q9NNX6 404 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 IFT57Q9NWB7 429 aa20.83■□□□□ 0.93
USP48-210ENST00000489108 GNAI1P63096 354 aa20.82■□□□□ 0.92
USP48-210ENST00000489108 SP3Q02447 781 aa20.82■□□□□ 0.92
USP48-210ENST00000489108 CWF19L2Q2TBE0 894 aaKnown RBP20.82■□□□□ 0.92
USP48-210ENST00000489108 SUPT20HL1Q3ZLR7 823 aa20.82■□□□□ 0.92
USP48-210ENST00000489108 NBPF12Q5TAG4 269 aaPredicted RBP20.82■□□□□ 0.92
USP48-210ENST00000489108 MTMR14Q8NCE2 650 aa20.82■□□□□ 0.92
USP48-210ENST00000489108 PTPN18Q99952 460 aa20.82■□□□□ 0.92
USP48-210ENST00000489108 BRCA2P51587 3418 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 611.8 ms