RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
SPTLC1-207ENST00000488921 VEGFBP49765 207 aa17.41■□□□□ 0.38
SPTLC1-207ENST00000488921 EPHA10Q5JZY3 1008 aa17.41■□□□□ 0.38
SPTLC1-207ENST00000488921 DCPSQ96C86 337 aaKnown RBP17.41■□□□□ 0.38
SPTLC1-207ENST00000488921 WTIPA6NIX2 430 aaPredicted RBP17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 CELF2O95319 508 aaKnown RBP17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 USP17L8P0C7I0 530 aa17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 ECE1P42892 770 aa17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 FMR1Q06787 632 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 RBM26Q5T8P6 1007 aaKnown RBP17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 STRIP1Q5VSL9 837 aa17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 LDHAL6AQ6ZMR3 332 aa17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 SUCLG2Q96I99 432 aa17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 CNNM1Q9NRU3 951 aa17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 TLL2Q9Y6L7 1015 aa17.4■□□□□ 0.38
SPTLC1-207ENST00000488921 EGFRP00533 1210 aa17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 NBPF7P0C2Y1 421 aaPredicted RBP17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 MMP14P50281 582 aa17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 CST9Q5W186 159 aa17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 DIEXFQ68CQ4 756 aaKnown RBP17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 KRT26Q7Z3Y9 468 aa17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 FBXW7Q969H0 707 aa17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 GMLQ99445 158 aa17.39■□□□□ 0.37
SPTLC1-207ENST00000488921 ECM29Q5VYK3 1845 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 DACT2Q5SW24 774 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 C15orf52Q6ZUT6 534 aaKnown RBP17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 TXNRD3Q86VQ6 643 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 ZNF408Q9H9D4 720 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 GGA3Q9NZ52 723 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
SPTLC1-207ENST00000488921 TAF5LO75529 589 aa17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 RABL6Q3YEC7 729 aaPredicted RBP17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 ZNF804AQ7Z570 1209 aa17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 AIDAQ96BJ3 306 aa17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 ZNF594Q96JF6 807 aaPredicted RBP17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 HHIPL1Q96JK4 782 aa17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
SPTLC1-207ENST00000488921 KLRK1P26718 216 aa17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 TTLL5Q6EMB2 1281 aa17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 HELBQ8NG08 1087 aaPredicted RBP17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 KAZALD1Q96I82 304 aa17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 CAPNS2Q96L46 248 aa17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 PITPNM2Q9BZ72 1349 aa17.36■□□□□ 0.37
SPTLC1-207ENST00000488921 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
SPTLC1-207ENST00000488921 CD209Q9NNX6 404 aa17.35■□□□□ 0.37
SPTLC1-207ENST00000488921 HDAC9Q9UKV0 1011 aa17.35■□□□□ 0.37
SPTLC1-207ENST00000488921 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
SPTLC1-207ENST00000488921 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
SPTLC1-207ENST00000488921 ADM5C9JUS6 153 aa17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 PLIN1O60240 522 aa17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 GTF2IP78347 998 aa17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 SCARF1Q14162 830 aa17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 MROH5Q6ZUA9 1318 aa17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
SPTLC1-207ENST00000488921 SNAP23O00161 211 aa17.33■□□□□ 0.36
SPTLC1-207ENST00000488921 UBE4AQ14139 1066 aa17.33■□□□□ 0.36
SPTLC1-207ENST00000488921 ANGEL2Q5VTE6 544 aaKnown RBP17.33■□□□□ 0.36
SPTLC1-207ENST00000488921 CYP4F22Q6NT55 531 aa17.33■□□□□ 0.36
SPTLC1-207ENST00000488921 MYH13Q9UKX3 1938 aa17.33■□□□□ 0.36
SPTLC1-207ENST00000488921 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.36
SPTLC1-207ENST00000488921 IL1R1P14778 569 aa17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 GRM1Q13255 1194 aa17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 ANKRD44Q8N8A2 993 aa17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 C2orf69Q8N8R5 385 aa17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 MXD3Q9BW11 206 aa17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
SPTLC1-207ENST00000488921 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 MAP2K2P36507 400 aa17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 CTCFP49711 727 aaPredicted RBP17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 HUNKP57058 714 aa17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 KIAA0825Q8IV33 1275 aa17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 RIPOR2Q9Y4F9 1068 aa17.31■□□□□ 0.36
SPTLC1-207ENST00000488921 FOXN1O15353 648 aa17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 METTL24Q5JXM2 366 aa17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 MIER1Q8N108 512 aa17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 CDCA5Q96FF9 252 aa17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 PUS3Q9BZE2 481 aaKnown RBP17.3■□□□□ 0.36
SPTLC1-207ENST00000488921 WNT10BO00744 389 aa17.29■□□□□ 0.36
SPTLC1-207ENST00000488921 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
SPTLC1-207ENST00000488921 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms