RNA–Protein interactions for RNA: ENST00000488779.5

EXOSC8-208, Transcript of exosome component 8, human

TSL 5

Gene EXOSC8, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC8-208	ENST00000488779	GREM2	Q9H772	168 aa		11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.66	□□□□□ -0.54
EXOSC8-208	ENST00000488779	XDH	P47989	1333 aa		11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	FZD9	O00144	591 aa		11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	TRIM27	P14373	513 aa		11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	ITGA6	P23229	1130 aa		11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	KIAA2012	Q0VF49	1180 aa		11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	JARID2	Q92833	1246 aa	Predicted RBP	11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	ANKRD2	Q9GZV1	360 aa		11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	SEC31B	Q9NQW1	1179 aa		11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.65	□□□□□ -0.54
EXOSC8-208	ENST00000488779	LTBP1	Q14766	1721 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	TIAM2	Q8IVF5	1701 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	BCAR3	O75815	825 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	GNAI3	P08754	354 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	CCDC57	Q2TAC2	916 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	FAM161A	Q3B820	660 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	LMBR1L	Q6UX01	489 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	OLFM4	Q6UX06	510 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	LARGE2	Q8N3Y3	721 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	MPHOSPH8	Q99549	860 aa		11.64	□□□□□ -0.55
EXOSC8-208	ENST00000488779	DUOX1	Q9NRD9	1551 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	PPIP5K2	O43314	1243 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	UBTFL1	P0CB47	393 aa	Predicted RBP	11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	HOXB1	P14653	301 aa	Predicted RBP	11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	ATP2B4	P23634	1241 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	NIM1K	Q8IY84	436 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	KAZALD1	Q96I82	304 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	GGA1	Q9UJY5	639 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	ZNRF3	Q9ULT6	936 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	MINPP1	Q9UNW1	487 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	LEMD3	Q9Y2U8	911 aa		11.63	□□□□□ -0.55
EXOSC8-208	ENST00000488779	CCDC88A	Q3V6T2	1871 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	EIF6	P56537	245 aa	Known RBP	11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	GPSM2	P81274	684 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	WASHC4	Q2M389	1173 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	EPHA10	Q5JZY3	1008 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	GPC2	Q8N158	579 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	ZNF710	Q8N1W2	664 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	TBC1D16	Q8TBP0	767 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	SUCLG2	Q96I99	432 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	ANKIB1	Q9P2G1	1089 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	WDR90	Q96KV7	1748 aa		11.62	□□□□□ -0.55
EXOSC8-208	ENST00000488779	IQCA1L	A6NCM1	817 aa		11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	VEGFA	P15692	232 aa	Predicted RBP	11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	C15orf52	Q6ZUT6	534 aa	Known RBP	11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	DZIP1L	Q8IYY4	767 aa	Known RBP	11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	ANKRD44	Q8N8A2	993 aa		11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	FRAT1	Q92837	279 aa	Predicted RBP	11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	BICC1	Q9H694	974 aa	Known RBP	11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	POLL	Q9UGP5	575 aa		11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	RCAN3	Q9UKA8	241 aa		11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	MED23	Q9ULK4	1368 aa		11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	TAF1	P21675	1872 aa		11.61	□□□□□ -0.55
EXOSC8-208	ENST00000488779	COL4A1	P02462	1669 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	C6orf229	H3BNL8	230 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	UFL1	O94874	794 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	MTX1	Q13505	466 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	TNIP1	Q15025	636 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	AOC3	Q16853	763 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	TAF7L	Q5H9L4	462 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	LDHAL6A	Q6ZMR3	332 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	FTSJ3	Q8IY81	847 aa	Known RBP	11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	CHMP4B	Q9H444	224 aa	Known RBP	11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	CHMP3	Q9Y3E7	222 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	ZNF609	O15014	1411 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	MROH5	Q6ZUA9	1318 aa		11.6	□□□□□ -0.55
EXOSC8-208	ENST00000488779	KIF3C	O14782	793 aa		11.59	□□□□□ -0.55
EXOSC8-208	ENST00000488779	TOMM70	O94826	608 aa		11.59	□□□□□ -0.55
EXOSC8-208	ENST00000488779	MMP14	P50281	582 aa		11.59	□□□□□ -0.55
EXOSC8-208	ENST00000488779	DOK7	Q18PE1	504 aa		11.59	□□□□□ -0.55
EXOSC8-208	ENST00000488779	PODN	Q7Z5L7	613 aa		11.59	□□□□□ -0.55
EXOSC8-208	ENST00000488779	GNAI2	P04899	355 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	CHRND	Q07001	517 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	RBM46	Q8TBY0	533 aa	Known RBP	11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	MEIS3	Q99687	375 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	CNNM1	Q9NRU3	951 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	RIPOR2	Q9Y4F9	1068 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	COL4A5	P29400	1685 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	SCN4A	P35499	1836 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	ZNF804B	A4D1E1	1349 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	ZNF541	Q9H0D2	1346 aa		11.58	□□□□□ -0.56
EXOSC8-208	ENST00000488779	CIAO1	O76071	339 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	RPS12	P25398	132 aa	Known RBP	11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	CXCL9	Q07325	125 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	FSTL1	Q12841	308 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	UBE4A	Q14139	1066 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	PDE3A	Q14432	1141 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	CIAPIN1	Q6FI81	312 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	TMEM57	Q8N5G2	664 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	ZNF526	Q8TF50	670 aa	Predicted RBP	11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	DPF2	Q92785	391 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	COA1	Q9GZY4	146 aa		11.57	□□□□□ -0.56
EXOSC8-208	ENST00000488779	NMRK2	Q9NPI5	230 aa		11.57	□□□□□ -0.56

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