RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ZNF526Q8TF50 670 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-229ENST00000488765 RIN2Q8WYP3 895 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-229ENST00000488765 SH2B1Q9NRF2 756 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-229ENST00000488765 A0A0U1RQJ8 604 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 TMEM232C9JQI7 657 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 IVLP07476 585 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 CFAP100Q494V2 611 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 PI4K2BQ8TCG2 481 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 ATRIPQ8WXE1 791 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 KAT2BQ92831 832 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 LZTFL1Q9NQ48 299 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 TDO2P48775 406 aa18.71■□□□□ 0.59
MCF2L-229ENST00000488765 CCDC12Q8WUD4 166 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-229ENST00000488765 ZSCAN31Q96LW9 406 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-229ENST00000488765 SERPINC1P01008 464 aa18.71■□□□□ 0.59
MCF2L-229ENST00000488765 SCP2P22307 547 aa18.71■□□□□ 0.59
MCF2L-229ENST00000488765 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
MCF2L-229ENST00000488765 PPP1R42Q7Z4L9 355 aa18.71■□□□□ 0.59
MCF2L-229ENST00000488765 GPR161Q8N6U8 529 aaKnown RBP18.71■□□□□ 0.59
MCF2L-229ENST00000488765 CLIC6Q96NY7 704 aa18.71■□□□□ 0.59
MCF2L-229ENST00000488765 ZSWIM6Q9HCJ5 1215 aa18.71■□□□□ 0.59
MCF2L-229ENST00000488765 CPS1P31327 1500 aa18.71■□□□□ 0.58
MCF2L-229ENST00000488765 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.58
MCF2L-229ENST00000488765 PDCP20941 246 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 ATP8B2P98198 1209 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 MCTP2Q6DN12 878 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 JPH2Q9BR39 696 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-229ENST00000488765 ABCB6Q9NP58 842 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 SRGAP3O43295 1099 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 USP28Q96RU2 1077 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 RAI14Q9P0K7 980 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 TSPYL4Q9UJ04 414 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 ADKP55263 362 aaKnown RBP18.7■□□□□ 0.58
MCF2L-229ENST00000488765 CORO7P57737 925 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 CREB3L3Q68CJ9 461 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 PNKPQ96T60 521 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 EHD4Q9H223 541 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 FAM204AQ9H8W3 233 aa18.7■□□□□ 0.58
MCF2L-229ENST00000488765 PSDA5PKW4 1024 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-229ENST00000488765 PPP2R5AQ15172 486 aa18.69■□□□□ 0.58
MCF2L-229ENST00000488765 MTHFSDQ2M296 383 aaKnown RBP18.69■□□□□ 0.58
MCF2L-229ENST00000488765 RHPN1Q8TCX5 695 aa18.69■□□□□ 0.58
MCF2L-229ENST00000488765 OSBPL5Q9H0X9 879 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-229ENST00000488765 VWA3AA6NCI4 1184 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 CCT2P78371 535 aaKnown RBP18.68■□□□□ 0.58
MCF2L-229ENST00000488765 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 BLOC1S2Q6QNY1 142 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 ZSCAN16Q9H4T2 348 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-229ENST00000488765 POLD4Q9HCU8 107 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 STAP2Q9UGK3 403 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 EDC4Q6P2E9 1401 aaKnown RBP18.68■□□□□ 0.58
MCF2L-229ENST00000488765 HSP90B2PQ58FF3 399 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 MMS22LQ6ZRQ5 1243 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 TOGARAM2Q6ZUX3 1019 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 CHGBP05060 677 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 STK11IPQ8N1F8 1099 aa18.68■□□□□ 0.58
MCF2L-229ENST00000488765 EIF2S2P20042 333 aaKnown RBP18.67■□□□□ 0.58
MCF2L-229ENST00000488765 PSME1Q06323 249 aa18.67■□□□□ 0.58
MCF2L-229ENST00000488765 JAKMIP3Q5VZ66 844 aa18.67■□□□□ 0.58
MCF2L-229ENST00000488765 CCDC150Q8NCX0 1101 aa18.67■□□□□ 0.58
MCF2L-229ENST00000488765 EYA1Q99502 592 aa18.67■□□□□ 0.58
MCF2L-229ENST00000488765 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
MCF2L-229ENST00000488765 KIAA0232Q92628 1395 aa18.67■□□□□ 0.58
MCF2L-229ENST00000488765 COL3A1P02461 1466 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-229ENST00000488765 WDHD1O75717 1129 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-229ENST00000488765 UBTFL1P0CB47 393 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-229ENST00000488765 PPP2R2CQ9Y2T4 447 aa18.67■□□□□ 0.58
MCF2L-229ENST00000488765 SOS1Q07889 1333 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-229ENST00000488765 FANCCQ00597 558 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 MTF1Q14872 753 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 TADA2BQ86TJ2 420 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 NAT10Q9H0A0 1025 aaKnown RBP18.66■□□□□ 0.58
MCF2L-229ENST00000488765 SLC24A3Q9HC58 644 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 PNPLA6Q8IY17 1366 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 FRMD3A2A2Y4 597 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 POLR3DP05423 398 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-229ENST00000488765 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 CCT5P48643 541 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 CCT4P50991 539 aaKnown RBP18.66■□□□□ 0.58
MCF2L-229ENST00000488765 UBASH3AP57075 661 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-229ENST00000488765 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 NDUFB9Q9Y6M9 179 aa18.66■□□□□ 0.58
MCF2L-229ENST00000488765 ERLIN2O94905 339 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 NDUFA8P51970 172 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 KIRREL3Q8IZU9 778 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 PHLPP2Q6ZVD8 1323 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 ADCY9O60503 1353 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 REREQ9P2R6 1566 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 SETD1BQ9UPS6 1966 aaKnown RBP18.65■□□□□ 0.58
MCF2L-229ENST00000488765 MTX1Q13505 466 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 CPLX3Q8WVH0 158 aa18.65■□□□□ 0.58
MCF2L-229ENST00000488765 ZMYND10O75800 440 aa18.64■□□□□ 0.58
MCF2L-229ENST00000488765 TXLNAP40222 546 aa18.64■□□□□ 0.58
MCF2L-229ENST00000488765 RESTQ13127 1097 aa18.64■□□□□ 0.58
MCF2L-229ENST00000488765 SF3A1Q15459 793 aaKnown RBP18.64■□□□□ 0.58
MCF2L-229ENST00000488765 STK31Q9BXU1 1019 aa18.64■□□□□ 0.58
MCF2L-229ENST00000488765 NCOA5Q9HCD5 579 aaKnown RBP18.64■□□□□ 0.58
MCF2L-229ENST00000488765 SSH2Q76I76 1423 aa18.64■□□□□ 0.57
MCF2L-229ENST00000488765 TPM1P09493 284 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms