RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 TRMT2AQ8IZ69 625 aaKnown RBP29.22■■■□□ 2.27
CUL4A-209ENST00000488558 SSH1Q8WYL5 1049 aa29.22■■■□□ 2.27
CUL4A-209ENST00000488558 HHIPL1Q96JK4 782 aa29.22■■■□□ 2.27
CUL4A-209ENST00000488558 CHMP3Q9Y3E7 222 aa29.22■■■□□ 2.27
CUL4A-209ENST00000488558 MYO3BQ8WXR4 1341 aa29.21■■■□□ 2.27
CUL4A-209ENST00000488558 CCDC57Q2TAC2 916 aa29.21■■■□□ 2.27
CUL4A-209ENST00000488558 ALDH1L2Q3SY69 923 aa29.21■■■□□ 2.27
CUL4A-209ENST00000488558 TXNRD3Q86VQ6 643 aa29.21■■■□□ 2.27
CUL4A-209ENST00000488558 POLR2AP24928 1970 aaKnown RBP29.21■■■□□ 2.27
CUL4A-209ENST00000488558 USP17L8P0C7I0 530 aa29.2■■■□□ 2.26
CUL4A-209ENST00000488558 KCNJ4P48050 445 aa29.2■■■□□ 2.26
CUL4A-209ENST00000488558 DACT2Q5SW24 774 aa29.2■■■□□ 2.26
CUL4A-209ENST00000488558 RBM26Q5T8P6 1007 aaKnown RBP29.2■■■□□ 2.26
CUL4A-209ENST00000488558 COL13A1Q5TAT6 717 aaPredicted RBP29.2■■■□□ 2.26
CUL4A-209ENST00000488558 STRIP1Q5VSL9 837 aa29.2■■■□□ 2.26
CUL4A-209ENST00000488558 C15orf52Q6ZUT6 534 aaKnown RBP29.2■■■□□ 2.26
CUL4A-209ENST00000488558 KRT26Q7Z3Y9 468 aa29.2■■■□□ 2.26
CUL4A-209ENST00000488558 SAPCD2Q86UD0 394 aa29.2■■■□□ 2.26
CUL4A-209ENST00000488558 DCPSQ96C86 337 aaKnown RBP29.2■■■□□ 2.26
CUL4A-209ENST00000488558 USP48Q86UV5 1035 aa29.19■■■□□ 2.26
CUL4A-209ENST00000488558 CDCA7LQ96GN5 454 aa29.19■■■□□ 2.26
CUL4A-209ENST00000488558 CAPNS2Q96L46 248 aa29.19■■■□□ 2.26
CUL4A-209ENST00000488558 IRS2Q9Y4H2 1338 aa29.19■■■□□ 2.26
CUL4A-209ENST00000488558 CT47B1P0C2W7 299 aaPredicted RBP29.18■■■□□ 2.26
CUL4A-209ENST00000488558 WBP1LQ9NX94 342 aa29.18■■■□□ 2.26
CUL4A-209ENST00000488558 KLRK1P26718 216 aa29.17■■■□□ 2.26
CUL4A-209ENST00000488558 MMP14P50281 582 aa29.17■■■□□ 2.26
CUL4A-209ENST00000488558 AIDAQ96BJ3 306 aa29.17■■■□□ 2.26
CUL4A-209ENST00000488558 MYOZ2Q9NPC6 264 aa29.17■■■□□ 2.26
CUL4A-209ENST00000488558 GGA3Q9NZ52 723 aa29.17■■■□□ 2.26
CUL4A-209ENST00000488558 NBPF7P0C2Y1 421 aaPredicted RBP29.16■■■□□ 2.26
CUL4A-209ENST00000488558 TAF7LQ5H9L4 462 aa29.16■■■□□ 2.26
CUL4A-209ENST00000488558 KAZALD1Q96I82 304 aa29.16■■■□□ 2.26
CUL4A-209ENST00000488558 SUCLG2Q96I99 432 aa29.16■■■□□ 2.26
CUL4A-209ENST00000488558 ZNF408Q9H9D4 720 aa29.16■■■□□ 2.26
CUL4A-209ENST00000488558 MAP2K1Q02750 393 aaPredicted RBP29.15■■■□□ 2.26
CUL4A-209ENST00000488558 CYP4F22Q6NT55 531 aa29.15■■■□□ 2.26
CUL4A-209ENST00000488558 LDHAL6AQ6ZMR3 332 aa29.15■■■□□ 2.26
CUL4A-209ENST00000488558 PAXIP1Q6ZW49 1069 aaPredicted RBP29.15■■■□□ 2.26
CUL4A-209ENST00000488558 SULF1Q8IWU6 871 aa29.15■■■□□ 2.26
CUL4A-209ENST00000488558 PITPNM2Q9BZ72 1349 aa29.15■■■□□ 2.26
CUL4A-209ENST00000488558 FOXN1O15353 648 aa29.14■■■□□ 2.26
CUL4A-209ENST00000488558 RABL6Q3YEC7 729 aaPredicted RBP29.14■■■□□ 2.26
CUL4A-209ENST00000488558 ADM5C9JUS6 153 aa29.13■■■□□ 2.25
CUL4A-209ENST00000488558 TAF5LO75529 589 aa29.13■■■□□ 2.25
CUL4A-209ENST00000488558 SCARF1Q14162 830 aa29.13■■■□□ 2.25
CUL4A-209ENST00000488558 ZNF594Q96JF6 807 aaPredicted RBP29.13■■■□□ 2.25
CUL4A-209ENST00000488558 CD209Q9NNX6 404 aa29.13■■■□□ 2.25
CUL4A-209ENST00000488558 CNNM1Q9NRU3 951 aa29.13■■■□□ 2.25
CUL4A-209ENST00000488558 TTLL5Q6EMB2 1281 aa29.12■■■□□ 2.25
CUL4A-209ENST00000488558 OGFOD1Q8N543 542 aa29.12■■■□□ 2.25
CUL4A-209ENST00000488558 HELBQ8NG08 1087 aaPredicted RBP29.12■■■□□ 2.25
CUL4A-209ENST00000488558 SMC4Q9NTJ3 1288 aa29.12■■■□□ 2.25
CUL4A-209ENST00000488558 MAP2K2P36507 400 aa29.11■■■□□ 2.25
CUL4A-209ENST00000488558 CTCFP49711 727 aaPredicted RBP29.11■■■□□ 2.25
CUL4A-209ENST00000488558 ANGEL2Q5VTE6 544 aaKnown RBP29.11■■■□□ 2.25
CUL4A-209ENST00000488558 FBXW7Q969H0 707 aa29.11■■■□□ 2.25
CUL4A-209ENST00000488558 ASTN2O75129 1339 aaPredicted RBP29.11■■■□□ 2.25
CUL4A-209ENST00000488558 ZNF804AQ7Z570 1209 aa29.1■■■□□ 2.25
CUL4A-209ENST00000488558 MXD3Q9BW11 206 aa29.1■■■□□ 2.25
CUL4A-209ENST00000488558 BICC1Q9H694 974 aaKnown RBP29.1■■■□□ 2.25
CUL4A-209ENST00000488558 PRDM10Q9NQV6 1147 aa29.1■■■□□ 2.25
CUL4A-209ENST00000488558 SNAP23O00161 211 aa29.09■■■□□ 2.25
CUL4A-209ENST00000488558 BRPF1P55201 1214 aaPredicted RBP29.09■■■□□ 2.25
CUL4A-209ENST00000488558 DLK2Q6UY11 383 aa29.09■■■□□ 2.25
CUL4A-209ENST00000488558 GBA2Q9HCG7 927 aaPredicted RBP29.09■■■□□ 2.25
CUL4A-209ENST00000488558 IL1R1P14778 569 aa29.08■■■□□ 2.25
CUL4A-209ENST00000488558 GTF2IP78347 998 aa29.08■■■□□ 2.25
CUL4A-209ENST00000488558 ANKRD44Q8N8A2 993 aa29.08■■■□□ 2.25
CUL4A-209ENST00000488558 HUNKP57058 714 aa29.07■■■□□ 2.24
CUL4A-209ENST00000488558 GRM1Q13255 1194 aa29.07■■■□□ 2.24
CUL4A-209ENST00000488558 TNS4Q8IZW8 715 aa29.07■■■□□ 2.24
CUL4A-209ENST00000488558 C2orf69Q8N8R5 385 aa29.07■■■□□ 2.24
CUL4A-209ENST00000488558 CDCA5Q96FF9 252 aa29.07■■■□□ 2.24
CUL4A-209ENST00000488558 USP44Q9H0E7 712 aa29.07■■■□□ 2.24
CUL4A-209ENST00000488558 UBE4AQ14139 1066 aa29.06■■■□□ 2.24
CUL4A-209ENST00000488558 HDAC9Q9UKV0 1011 aa29.06■■■□□ 2.24
CUL4A-209ENST00000488558 PAPPA2Q9BXP8 1791 aa29.06■■■□□ 2.24
CUL4A-209ENST00000488558 MROH5Q6ZUA9 1318 aa29.05■■■□□ 2.24
CUL4A-209ENST00000488558 FKBP1AP62942 108 aaKnown RBP29.05■■■□□ 2.24
CUL4A-209ENST00000488558 ARAP2Q8WZ64 1704 aa29.04■■■□□ 2.24
CUL4A-209ENST00000488558 WNT10BO00744 389 aa29.04■■■□□ 2.24
CUL4A-209ENST00000488558 NBPF9Q3BBW0 867 aa29.04■■■□□ 2.24
CUL4A-209ENST00000488558 RIPOR2Q9Y4F9 1068 aa29.04■■■□□ 2.24
CUL4A-209ENST00000488558 ECM29Q5VYK3 1845 aa29.04■■■□□ 2.24
CUL4A-209ENST00000488558 PLIN1O60240 522 aa29.03■■■□□ 2.24
CUL4A-209ENST00000488558 AOC2O75106 756 aa29.03■■■□□ 2.24
CUL4A-209ENST00000488558 NOGQ13253 232 aa29.03■■■□□ 2.24
CUL4A-209ENST00000488558 KIAA0825Q8IV33 1275 aa29.03■■■□□ 2.24
CUL4A-209ENST00000488558 BEGAINQ9BUH8 593 aa29.03■■■□□ 2.24
CUL4A-209ENST00000488558 PUS3Q9BZE2 481 aaKnown RBP29.03■■■□□ 2.24
CUL4A-209ENST00000488558 HSPA8P11142 646 aaKnown RBP29.02■■■□□ 2.24
CUL4A-209ENST00000488558 FKBP1BP68106 108 aa29.02■■■□□ 2.24
CUL4A-209ENST00000488558 RGMBQ6NW40 437 aa29.01■■■□□ 2.23
CUL4A-209ENST00000488558 CERS5Q8N5B7 392 aa29.01■■■□□ 2.23
CUL4A-209ENST00000488558 ZBED3Q96IU2 234 aaPredicted RBP29.01■■■□□ 2.23
CUL4A-209ENST00000488558 API5Q9BZZ5 524 aaKnown RBP29.01■■■□□ 2.23
CUL4A-209ENST00000488558 FAM205AQ6ZU69 1335 aa28.99■■■□□ 2.23
CUL4A-209ENST00000488558 COL1A1P02452 1464 aaPredicted RBP28.99■■■□□ 2.23
CUL4A-209ENST00000488558 CA12O43570 354 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms