RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 FBXW7Q969H0 707 aa22.36■■□□□ 1.17
ITGB1-215ENST00000488494 GLIS2Q9BZE0 524 aaPredicted RBP22.36■■□□□ 1.17
ITGB1-215ENST00000488494 COA1Q9GZY4 146 aa22.36■■□□□ 1.17
ITGB1-215ENST00000488494 NOB1Q9ULX3 412 aaKnown RBP22.36■■□□□ 1.17
ITGB1-215ENST00000488494 TRPM7Q96QT4 1865 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 SNAP23O00161 211 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 RARSP54136 660 aaKnown RBP22.35■■□□□ 1.17
ITGB1-215ENST00000488494 KIF4BQ2VIQ3 1234 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 LDHAL6AQ6ZMR3 332 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 ANKRD44Q8N8A2 993 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 AGBL3Q8NEM8 1001 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 CNNM1Q9NRU3 951 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 PGAP2Q9UHJ9 254 aa22.35■■□□□ 1.17
ITGB1-215ENST00000488494 ABT1Q9ULW3 272 aaKnown RBP22.35■■□□□ 1.17
ITGB1-215ENST00000488494 RABL6Q3YEC7 729 aaPredicted RBP22.34■■□□□ 1.17
ITGB1-215ENST00000488494 RBM26Q5T8P6 1007 aaKnown RBP22.34■■□□□ 1.17
ITGB1-215ENST00000488494 USP44Q9H0E7 712 aa22.33■■□□□ 1.17
ITGB1-215ENST00000488494 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
ITGB1-215ENST00000488494 IRS2Q9Y4H2 1338 aa22.32■■□□□ 1.16
ITGB1-215ENST00000488494 BRPF1P55201 1214 aaPredicted RBP22.32■■□□□ 1.16
ITGB1-215ENST00000488494 ZNF280AP59817 542 aaPredicted RBP22.32■■□□□ 1.16
ITGB1-215ENST00000488494 DACT2Q5SW24 774 aa22.32■■□□□ 1.16
ITGB1-215ENST00000488494 GMLQ99445 158 aa22.32■■□□□ 1.16
ITGB1-215ENST00000488494 MXD3Q9BW11 206 aa22.32■■□□□ 1.16
ITGB1-215ENST00000488494 API5Q9BZZ5 524 aaKnown RBP22.32■■□□□ 1.16
ITGB1-215ENST00000488494 PLIN1O60240 522 aa22.31■■□□□ 1.16
ITGB1-215ENST00000488494 RASSF10A6NK89 507 aa22.3■■□□□ 1.16
ITGB1-215ENST00000488494 USP17L8P0C7I0 530 aa22.3■■□□□ 1.16
ITGB1-215ENST00000488494 STRIP1Q5VSL9 837 aa22.3■■□□□ 1.16
ITGB1-215ENST00000488494 CST9Q5W186 159 aa22.3■■□□□ 1.16
ITGB1-215ENST00000488494 CDC37L1Q7L3B6 337 aa22.3■■□□□ 1.16
ITGB1-215ENST00000488494 PUS3Q9BZE2 481 aaKnown RBP22.3■■□□□ 1.16
ITGB1-215ENST00000488494 GGA3Q9NZ52 723 aa22.3■■□□□ 1.16
ITGB1-215ENST00000488494 ASTN2O75129 1339 aaPredicted RBP22.3■■□□□ 1.16
ITGB1-215ENST00000488494 CELF2O95319 508 aaKnown RBP22.29■■□□□ 1.16
ITGB1-215ENST00000488494 VEGFBP49765 207 aa22.29■■□□□ 1.16
ITGB1-215ENST00000488494 C15orf52Q6ZUT6 534 aaKnown RBP22.29■■□□□ 1.16
ITGB1-215ENST00000488494 KRT26Q7Z3Y9 468 aa22.29■■□□□ 1.16
ITGB1-215ENST00000488494 ZNF408Q9H9D4 720 aa22.29■■□□□ 1.16
ITGB1-215ENST00000488494 MYO3BQ8WXR4 1341 aa22.29■■□□□ 1.16
ITGB1-215ENST00000488494 ADM5C9JUS6 153 aa22.28■■□□□ 1.16
ITGB1-215ENST00000488494 ZNF804AQ7Z570 1209 aa22.28■■□□□ 1.16
ITGB1-215ENST00000488494 USP48Q86UV5 1035 aa22.28■■□□□ 1.16
ITGB1-215ENST00000488494 CD209Q9NNX6 404 aa22.28■■□□□ 1.16
ITGB1-215ENST00000488494 MYOZ2Q9NPC6 264 aa22.28■■□□□ 1.16
ITGB1-215ENST00000488494 THSD7BQ9C0I4 1608 aa22.28■■□□□ 1.16
ITGB1-215ENST00000488494 UBTFL1P0CB47 393 aaPredicted RBP22.27■■□□□ 1.16
ITGB1-215ENST00000488494 HSPA1AP0DMV8 641 aaKnown RBP22.27■■□□□ 1.16
ITGB1-215ENST00000488494 HSPA1BP0DMV9 641 aaKnown RBP22.27■■□□□ 1.16
ITGB1-215ENST00000488494 GTF2IP78347 998 aa22.27■■□□□ 1.16
ITGB1-215ENST00000488494 TTLL5Q6EMB2 1281 aa22.27■■□□□ 1.16
ITGB1-215ENST00000488494 DLK2Q6UY11 383 aa22.27■■□□□ 1.16
ITGB1-215ENST00000488494 DCPSQ96C86 337 aaKnown RBP22.27■■□□□ 1.16
ITGB1-215ENST00000488494 MROH5Q6ZUA9 1318 aa22.27■■□□□ 1.16
ITGB1-215ENST00000488494 DEFB115Q30KQ5 88 aa22.26■■□□□ 1.15
ITGB1-215ENST00000488494 LRRC24Q50LG9 513 aa22.26■■□□□ 1.15
ITGB1-215ENST00000488494 KLHDC4Q8TBB5 520 aa22.26■■□□□ 1.15
ITGB1-215ENST00000488494 TLL2Q9Y6L7 1015 aa22.26■■□□□ 1.15
ITGB1-215ENST00000488494 SCARF1Q14162 830 aa22.25■■□□□ 1.15
ITGB1-215ENST00000488494 PAXIP1Q6ZW49 1069 aaPredicted RBP22.25■■□□□ 1.15
ITGB1-215ENST00000488494 RIPOR2Q9Y4F9 1068 aa22.25■■□□□ 1.15
ITGB1-215ENST00000488494 IL1R1P14778 569 aa22.24■■□□□ 1.15
ITGB1-215ENST00000488494 UBE4AQ14139 1066 aa22.24■■□□□ 1.15
ITGB1-215ENST00000488494 METTL24Q5JXM2 366 aa22.24■■□□□ 1.15
ITGB1-215ENST00000488494 ANGEL2Q5VTE6 544 aaKnown RBP22.24■■□□□ 1.15
ITGB1-215ENST00000488494 KIAA0825Q8IV33 1275 aa22.24■■□□□ 1.15
ITGB1-215ENST00000488494 SULF1Q8IWU6 871 aa22.24■■□□□ 1.15
ITGB1-215ENST00000488494 OGFOD1Q8N543 542 aa22.24■■□□□ 1.15
ITGB1-215ENST00000488494 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
ITGB1-215ENST00000488494 BCAR3O75815 825 aa22.23■■□□□ 1.15
ITGB1-215ENST00000488494 FRAT1Q92837 279 aaPredicted RBP22.23■■□□□ 1.15
ITGB1-215ENST00000488494 ZBED9Q6R2W3 1325 aa22.23■■□□□ 1.15
ITGB1-215ENST00000488494 TRIM27P14373 513 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 GRM1Q13255 1194 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 SAPCD2Q86UD0 394 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 CERS5Q8N5B7 392 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 CAPNS2Q96L46 248 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 MEIS3Q99687 375 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 JAG2Q9Y219 1238 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
ITGB1-215ENST00000488494 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
ITGB1-215ENST00000488494 ARAP2Q8WZ64 1704 aa22.22■■□□□ 1.15
ITGB1-215ENST00000488494 SASH1O94885 1247 aa22.21■■□□□ 1.15
ITGB1-215ENST00000488494 GYG1P46976 350 aa22.21■■□□□ 1.15
ITGB1-215ENST00000488494 RFX5P48382 616 aaPredicted RBP22.21■■□□□ 1.15
ITGB1-215ENST00000488494 INTS3Q68E01 1043 aaKnown RBP22.21■■□□□ 1.15
ITGB1-215ENST00000488494 CYP4F22Q6NT55 531 aa22.21■■□□□ 1.15
ITGB1-215ENST00000488494 VGLL2Q8N8G2 317 aa22.21■■□□□ 1.15
ITGB1-215ENST00000488494 TNNQ9UQP3 1299 aa22.21■■□□□ 1.15
ITGB1-215ENST00000488494 IPO8O15397 1037 aaKnown RBP22.2■■□□□ 1.14
ITGB1-215ENST00000488494 NBPF9Q3BBW0 867 aa22.2■■□□□ 1.14
ITGB1-215ENST00000488494 HDAC9Q9UKV0 1011 aa22.2■■□□□ 1.14
ITGB1-215ENST00000488494 PITPNM2Q9BZ72 1349 aa22.2■■□□□ 1.14
ITGB1-215ENST00000488494 ECE1P42892 770 aa22.19■■□□□ 1.14
ITGB1-215ENST00000488494 ATF7IPQ6VMQ6 1270 aa22.19■■□□□ 1.14
ITGB1-215ENST00000488494 CDCA5Q96FF9 252 aa22.19■■□□□ 1.14
ITGB1-215ENST00000488494 SCAF8Q9UPN6 1271 aaKnown RBP22.19■■□□□ 1.14
ITGB1-215ENST00000488494 POLR2AP24928 1970 aaKnown RBP22.19■■□□□ 1.14
ITGB1-215ENST00000488494 WNT10BO00744 389 aa22.18■■□□□ 1.14
ITGB1-215ENST00000488494 PDE8BO95263 885 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms