RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 TRPM4Q8TD43 1214 aa17.86■□□□□ 0.45
COL9A2-208ENST00000488463 MEIS3Q99687 375 aa17.86■□□□□ 0.45
COL9A2-208ENST00000488463 PGAP2Q9UHJ9 254 aa17.86■□□□□ 0.45
COL9A2-208ENST00000488463 MAP1SQ66K74 1059 aaPredicted RBP17.85■□□□□ 0.45
COL9A2-208ENST00000488463 MICALL2Q8IY33 904 aa17.85■□□□□ 0.45
COL9A2-208ENST00000488463 COA1Q9GZY4 146 aa17.85■□□□□ 0.45
COL9A2-208ENST00000488463 IPO8O15397 1037 aaKnown RBP17.84■□□□□ 0.45
COL9A2-208ENST00000488463 EGFRP00533 1210 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-208ENST00000488463 LRRC24Q50LG9 513 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 TAF7LQ5H9L4 462 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-208ENST00000488463 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 VGLL2Q8N8G2 317 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 KLHDC4Q8TBB5 520 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 FRAT1Q92837 279 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-208ENST00000488463 CNNM1Q9NRU3 951 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 CLEC11AQ9Y240 323 aa17.84■□□□□ 0.45
COL9A2-208ENST00000488463 POLR2AP24928 1970 aaKnown RBP17.83■□□□□ 0.44
COL9A2-208ENST00000488463 USP17L3A6NCW0 530 aa17.83■□□□□ 0.44
COL9A2-208ENST00000488463 USP17L4A6NCW7 530 aa17.83■□□□□ 0.44
COL9A2-208ENST00000488463 PTPN12Q05209 780 aaKnown RBP17.83■□□□□ 0.44
COL9A2-208ENST00000488463 DACT2Q5SW24 774 aa17.83■□□□□ 0.44
COL9A2-208ENST00000488463 USP17L1Q7RTZ2 530 aa17.83■□□□□ 0.44
COL9A2-208ENST00000488463 LRRFIP2Q9Y608 721 aaKnown RBP17.83■□□□□ 0.44
COL9A2-208ENST00000488463 G3V3G9 751 aa17.82■□□□□ 0.44
COL9A2-208ENST00000488463 ZNF280AP59817 542 aaPredicted RBP17.82■□□□□ 0.44
COL9A2-208ENST00000488463 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
COL9A2-208ENST00000488463 SAMD7Q7Z3H4 446 aa17.82■□□□□ 0.44
COL9A2-208ENST00000488463 AGBL3Q8NEM8 1001 aa17.82■□□□□ 0.44
COL9A2-208ENST00000488463 MROH5Q6ZUA9 1318 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 H7C1D1 291 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 IL1R1P14778 569 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 KCNJ4P48050 445 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 FMR1Q06787 632 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL9A2-208ENST00000488463 UBE4AQ14139 1066 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 STRIP1Q5VSL9 837 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 ZC3H15Q8WU90 426 aaKnown RBP17.81■□□□□ 0.44
COL9A2-208ENST00000488463 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 CD209Q9NNX6 404 aa17.81■□□□□ 0.44
COL9A2-208ENST00000488463 TRPM7Q96QT4 1865 aa17.8■□□□□ 0.44
COL9A2-208ENST00000488463 PLIN1O60240 522 aa17.8■□□□□ 0.44
COL9A2-208ENST00000488463 RLBP1P12271 317 aa17.8■□□□□ 0.44
COL9A2-208ENST00000488463 ATG9AQ7Z3C6 839 aa17.8■□□□□ 0.44
COL9A2-208ENST00000488463 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
COL9A2-208ENST00000488463 MTX1Q13505 466 aa17.79■□□□□ 0.44
COL9A2-208ENST00000488463 TBC1D10BQ4KMP7 808 aaPredicted RBP17.79■□□□□ 0.44
COL9A2-208ENST00000488463 CREBZFQ9NS37 354 aa17.79■□□□□ 0.44
COL9A2-208ENST00000488463 EYA2O00167 538 aa17.78■□□□□ 0.44
COL9A2-208ENST00000488463 TRAF5O00463 557 aa17.78■□□□□ 0.44
COL9A2-208ENST00000488463 PDE8BO95263 885 aa17.78■□□□□ 0.44
COL9A2-208ENST00000488463 GNAI3P08754 354 aa17.78■□□□□ 0.44
COL9A2-208ENST00000488463 COL13A1Q5TAT6 717 aaPredicted RBP17.78■□□□□ 0.44
COL9A2-208ENST00000488463 FAM84BQ96KN1 310 aaPredicted RBP17.78■□□□□ 0.44
COL9A2-208ENST00000488463 USP17L8P0C7I0 530 aa17.77■□□□□ 0.44
COL9A2-208ENST00000488463 FGFR2P21802 821 aa17.77■□□□□ 0.44
COL9A2-208ENST00000488463 TTLL5Q6EMB2 1281 aa17.77■□□□□ 0.44
COL9A2-208ENST00000488463 CERS5Q8N5B7 392 aa17.77■□□□□ 0.44
COL9A2-208ENST00000488463 ASTN2O75129 1339 aaPredicted RBP17.76■□□□□ 0.43
COL9A2-208ENST00000488463 GYG1P46976 350 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 GTF2IP78347 998 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 KIF4BQ2VIQ3 1234 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 METTL24Q5JXM2 366 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 CST9Q5W186 159 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 ZNF804AQ7Z570 1209 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 FBXO33Q7Z6M2 555 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 TDRD7Q8NHU6 1098 aaKnown RBP17.76■□□□□ 0.43
COL9A2-208ENST00000488463 GLIS2Q9BZE0 524 aaPredicted RBP17.76■□□□□ 0.43
COL9A2-208ENST00000488463 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 PA2G4Q9UQ80 394 aaKnown RBP17.76■□□□□ 0.43
COL9A2-208ENST00000488463 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
COL9A2-208ENST00000488463 MYO3BQ8WXR4 1341 aa17.75■□□□□ 0.43
COL9A2-208ENST00000488463 TMEM88BA6NKF7 163 aa17.75■□□□□ 0.43
COL9A2-208ENST00000488463 CIAO1O76071 339 aa17.75■□□□□ 0.43
COL9A2-208ENST00000488463 RBM26Q5T8P6 1007 aaKnown RBP17.75■□□□□ 0.43
COL9A2-208ENST00000488463 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
COL9A2-208ENST00000488463 MYOZ2Q9NPC6 264 aa17.75■□□□□ 0.43
COL9A2-208ENST00000488463 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
COL9A2-208ENST00000488463 SASH1O94885 1247 aa17.74■□□□□ 0.43
COL9A2-208ENST00000488463 DLK2Q6UY11 383 aa17.74■□□□□ 0.43
COL9A2-208ENST00000488463 ZBED3Q96IU2 234 aaPredicted RBP17.74■□□□□ 0.43
COL9A2-208ENST00000488463 ARAP2Q8WZ64 1704 aa17.74■□□□□ 0.43
COL9A2-208ENST00000488463 ZBTB7BO15156 539 aaPredicted RBP17.73■□□□□ 0.43
COL9A2-208ENST00000488463 GNAI2P04899 355 aa17.73■□□□□ 0.43
COL9A2-208ENST00000488463 HIBADHP31937 336 aaKnown RBP17.73■□□□□ 0.43
COL9A2-208ENST00000488463 FKBP1AP62942 108 aaKnown RBP17.73■□□□□ 0.43
COL9A2-208ENST00000488463 SIL1Q9H173 461 aa17.73■□□□□ 0.43
COL9A2-208ENST00000488463 CNTNAP1P78357 1384 aa17.72■□□□□ 0.43
COL9A2-208ENST00000488463 PNMA6EA0A0J9YXQ4 647 aa17.72■□□□□ 0.43
COL9A2-208ENST00000488463 SCARF1Q14162 830 aa17.72■□□□□ 0.43
COL9A2-208ENST00000488463 PUM3Q15397 648 aaKnown RBP17.72■□□□□ 0.43
COL9A2-208ENST00000488463 CDC37L1Q7L3B6 337 aa17.72■□□□□ 0.43
COL9A2-208ENST00000488463 FBXW7Q969H0 707 aa17.72■□□□□ 0.43
COL9A2-208ENST00000488463 SRGAP3O43295 1099 aa17.71■□□□□ 0.43
COL9A2-208ENST00000488463 MMP14P50281 582 aa17.71■□□□□ 0.43
COL9A2-208ENST00000488463 NBPF9Q3BBW0 867 aa17.71■□□□□ 0.43
COL9A2-208ENST00000488463 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms