RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TFIP11Q9UBB9 837 aaKnown RBP8.16□□□□□ -1.1
CDHR3-213ENST00000488386 BTAF1O14981 1849 aa8.15□□□□□ -1.1
CDHR3-213ENST00000488386 MAP2P11137 1827 aaKnown RBP8.15□□□□□ -1.1
CDHR3-213ENST00000488386 DOT1LQ8TEK3 1739 aa8.15□□□□□ -1.1
CDHR3-213ENST00000488386 MAP7D1Q3KQU3 841 aa8.15□□□□□ -1.1
CDHR3-213ENST00000488386 ZFP42Q96MM3 310 aa8.15□□□□□ -1.1
CDHR3-213ENST00000488386 MAFBQ9Y5Q3 323 aaPredicted RBP8.15□□□□□ -1.1
CDHR3-213ENST00000488386 PARD3Q8TEW0 1356 aa8.14□□□□□ -1.11
CDHR3-213ENST00000488386 KCNQ4P56696 695 aa8.14□□□□□ -1.11
CDHR3-213ENST00000488386 TXNRD1Q16881 649 aa8.14□□□□□ -1.11
CDHR3-213ENST00000488386 SYTL4Q96C24 671 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-213ENST00000488386 ZNF395Q9H8N7 513 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-213ENST00000488386 PANK3Q9H999 370 aa8.14□□□□□ -1.11
CDHR3-213ENST00000488386 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-213ENST00000488386 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
CDHR3-213ENST00000488386 RTL1A6NKG5 1358 aa8.13□□□□□ -1.11
CDHR3-213ENST00000488386 ANKRD26Q9UPS8 1709 aa8.13□□□□□ -1.11
CDHR3-213ENST00000488386 PLSCR1O15162 318 aa8.13□□□□□ -1.11
CDHR3-213ENST00000488386 CNGB1Q14028 1251 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-213ENST00000488386 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
CDHR3-213ENST00000488386 RAB6BQ9NRW1 208 aa8.13□□□□□ -1.11
CDHR3-213ENST00000488386 BCL9O00512 1426 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 FLT4P35916 1363 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 ATP5J2-PTCD1G3V325 749 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-213ENST00000488386 BMP2P12643 396 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 PTGIRP43119 386 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 EML3Q32P44 896 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 ERICH6Q7L0X2 663 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 CCDC82Q8N4S0 544 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
CDHR3-213ENST00000488386 ARHGEF10LQ9HCE6 1279 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 CASZ1Q86V15 1759 aa8.12□□□□□ -1.11
CDHR3-213ENST00000488386 SMG6Q86US8 1419 aaKnown RBP8.12□□□□□ -1.11
CDHR3-213ENST00000488386 INSRP06213 1382 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 CGNL1Q0VF96 1302 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 SPINT1O43278 529 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 ZBTB7AO95365 584 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 SNRPBP14678 240 aaKnown RBP8.11□□□□□ -1.11
CDHR3-213ENST00000488386 CTSOP43234 321 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-213ENST00000488386 USP4Q13107 963 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 ZCRB1Q8TBF4 217 aaKnown RBP8.11□□□□□ -1.11
CDHR3-213ENST00000488386 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-213ENST00000488386 LRRC4BQ9NT99 713 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 PCDHGA11Q9Y5H2 935 aa8.11□□□□□ -1.11
CDHR3-213ENST00000488386 KIF7Q2M1P5 1343 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 TOGARAM1Q9Y4F4 1720 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 SOBPA7XYQ1 873 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-213ENST00000488386 CLDN10P78369 228 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 SCARF1Q14162 830 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 ZNF827Q17R98 1081 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 RAPGEF4Q8WZA2 1011 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 PAPPAQ13219 1627 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 NSD2O96028 1365 aa8.1□□□□□ -1.11
CDHR3-213ENST00000488386 TUBGCP6Q96RT7 1819 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 A0A1W2PRU2 124 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 UPP2O95045 317 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 IL2RAP01589 272 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 TATP17735 454 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-213ENST00000488386 RFX1P22670 979 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 SCNN1DP51172 638 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 GTF2IP78347 998 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
CDHR3-213ENST00000488386 TRIM47Q96LD4 638 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 ETNK1Q9HBU6 452 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 STK32BQ9NY57 414 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 NOD1Q9Y239 953 aa8.09□□□□□ -1.11
CDHR3-213ENST00000488386 CYP27B1O15528 508 aa8.08□□□□□ -1.12
CDHR3-213ENST00000488386 EIF4A2Q14240 407 aaKnown RBP8.08□□□□□ -1.12
CDHR3-213ENST00000488386 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
CDHR3-213ENST00000488386 DNMT3LQ9UJW3 386 aa8.08□□□□□ -1.12
CDHR3-213ENST00000488386 LY75O60449 1722 aa8.08□□□□□ -1.12
CDHR3-213ENST00000488386 PKD1L3Q7Z443 1732 aa8.08□□□□□ -1.12
CDHR3-213ENST00000488386 ITGB4P16144 1822 aa8.08□□□□□ -1.12
CDHR3-213ENST00000488386 WASHC2AQ641Q2 1341 aa8.07□□□□□ -1.12
CDHR3-213ENST00000488386 TMEM229AB2RXF0 380 aa8.07□□□□□ -1.12
CDHR3-213ENST00000488386 MEN1O00255 615 aa8.07□□□□□ -1.12
CDHR3-213ENST00000488386 LZTS3O60299 673 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-213ENST00000488386 CC2D1BQ5T0F9 858 aaKnown RBP8.07□□□□□ -1.12
CDHR3-213ENST00000488386 MPRIPQ6WCQ1 1025 aa8.07□□□□□ -1.12
CDHR3-213ENST00000488386 SMIM5Q71RC9 77 aa8.07□□□□□ -1.12
CDHR3-213ENST00000488386 MORC1Q86VD1 984 aa8.07□□□□□ -1.12
CDHR3-213ENST00000488386 CCDC97Q96F63 343 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-213ENST00000488386 SPON1Q9HCB6 807 aa8.07□□□□□ -1.12
CDHR3-213ENST00000488386 PPP1R1BQ9UD71 204 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-213ENST00000488386 PCDH11XQ9BZA7 1347 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 PCDH11YQ9BZA8 1340 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-213ENST00000488386 GNRH1P01148 92 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 CLN3Q13286 438 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 OGFOD1Q8N543 542 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 SENP2Q9HC62 589 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms