RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ABHD8Q96I13 439 aa19.56■□□□□ 0.72
TRIM50-203ENST00000488217 MYH16Q9H6N6 1097 aa19.56■□□□□ 0.72
TRIM50-203ENST00000488217 GGA3Q9NZ52 723 aa19.56■□□□□ 0.72
TRIM50-203ENST00000488217 LRRC37AA6NMS7 1700 aa19.56■□□□□ 0.72
TRIM50-203ENST00000488217 FANCIQ9NVI1 1328 aa19.55■□□□□ 0.72
TRIM50-203ENST00000488217 FAM155AB1AL88 458 aaPredicted RBP19.55■□□□□ 0.72
TRIM50-203ENST00000488217 ITGA6P23229 1130 aa19.55■□□□□ 0.72
TRIM50-203ENST00000488217 ZNF157P51786 506 aaPredicted RBP19.55■□□□□ 0.72
TRIM50-203ENST00000488217 EXOSC9Q06265 439 aaKnown RBP19.55■□□□□ 0.72
TRIM50-203ENST00000488217 MPHOSPH8Q99549 860 aa19.55■□□□□ 0.72
TRIM50-203ENST00000488217 ANKRD2Q9GZV1 360 aa19.55■□□□□ 0.72
TRIM50-203ENST00000488217 COA1Q9GZY4 146 aa19.54■□□□□ 0.72
TRIM50-203ENST00000488217 KIF23Q02241 960 aaPredicted RBP19.53■□□□□ 0.72
TRIM50-203ENST00000488217 DACT2Q5SW24 774 aa19.53■□□□□ 0.72
TRIM50-203ENST00000488217 STRIP1Q5VSL9 837 aa19.53■□□□□ 0.72
TRIM50-203ENST00000488217 TXNRD3Q86VQ6 643 aa19.53■□□□□ 0.72
TRIM50-203ENST00000488217 OGFOD1Q8N543 542 aa19.53■□□□□ 0.72
TRIM50-203ENST00000488217 CDCA5Q96FF9 252 aa19.53■□□□□ 0.72
TRIM50-203ENST00000488217 ZNF804BA4D1E1 1349 aa19.52■□□□□ 0.72
TRIM50-203ENST00000488217 MXD3Q9BW11 206 aa19.52■□□□□ 0.72
TRIM50-203ENST00000488217 MED23Q9ULK4 1368 aa19.52■□□□□ 0.72
TRIM50-203ENST00000488217 MMP14P50281 582 aa19.51■□□□□ 0.71
TRIM50-203ENST00000488217 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
TRIM50-203ENST00000488217 TTLL5Q6EMB2 1281 aa19.51■□□□□ 0.71
TRIM50-203ENST00000488217 SPINK5Q9NQ38 1064 aaPredicted RBP19.51■□□□□ 0.71
TRIM50-203ENST00000488217 ZNF609O15014 1411 aa19.51■□□□□ 0.71
TRIM50-203ENST00000488217 ANKRD18BA2A2Z9 1011 aa19.5■□□□□ 0.71
TRIM50-203ENST00000488217 NBPF9Q3BBW0 867 aa19.5■□□□□ 0.71
TRIM50-203ENST00000488217 BEND3Q5T5X7 828 aa19.5■□□□□ 0.71
TRIM50-203ENST00000488217 FBXW7Q969H0 707 aa19.5■□□□□ 0.71
TRIM50-203ENST00000488217 PITPNM2Q9BZ72 1349 aa19.5■□□□□ 0.71
TRIM50-203ENST00000488217 F6X3S4 739 aa19.49■□□□□ 0.71
TRIM50-203ENST00000488217 FKBP1BP68106 108 aa19.49■□□□□ 0.71
TRIM50-203ENST00000488217 FOXO4P98177 505 aa19.49■□□□□ 0.71
TRIM50-203ENST00000488217 CHRNDQ07001 517 aa19.49■□□□□ 0.71
TRIM50-203ENST00000488217 CSRNP1Q96S65 589 aa19.49■□□□□ 0.71
TRIM50-203ENST00000488217 MYO3BQ8WXR4 1341 aa19.49■□□□□ 0.71
TRIM50-203ENST00000488217 TRPM7Q96QT4 1865 aa19.48■□□□□ 0.71
TRIM50-203ENST00000488217 CCDC85CA6NKD9 419 aa19.48■□□□□ 0.71
TRIM50-203ENST00000488217 KCNJ4P48050 445 aa19.48■□□□□ 0.71
TRIM50-203ENST00000488217 IFIT5Q13325 482 aaKnown RBP19.48■□□□□ 0.71
TRIM50-203ENST00000488217 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
TRIM50-203ENST00000488217 SCAF8Q9UPN6 1271 aaKnown RBP19.48■□□□□ 0.71
TRIM50-203ENST00000488217 WNT10BO00744 389 aa19.47■□□□□ 0.71
TRIM50-203ENST00000488217 KLRK1P26718 216 aa19.47■□□□□ 0.71
TRIM50-203ENST00000488217 GTF2IP78347 998 aa19.47■□□□□ 0.71
TRIM50-203ENST00000488217 PRAMEF18Q5VWM3 479 aa19.47■□□□□ 0.71
TRIM50-203ENST00000488217 REM2Q8IYK8 340 aaPredicted RBP19.47■□□□□ 0.71
TRIM50-203ENST00000488217 RNF186Q9NXI6 227 aa19.47■□□□□ 0.71
TRIM50-203ENST00000488217 TAF5LO75529 589 aa19.46■□□□□ 0.71
TRIM50-203ENST00000488217 SLC10A3P09131 477 aa19.46■□□□□ 0.71
TRIM50-203ENST00000488217 HELBQ8NG08 1087 aaPredicted RBP19.46■□□□□ 0.71
TRIM50-203ENST00000488217 CD209Q9NNX6 404 aa19.46■□□□□ 0.71
TRIM50-203ENST00000488217 SAGE1Q9NXZ1 904 aa19.46■□□□□ 0.71
TRIM50-203ENST00000488217 HDAC9Q9UKV0 1011 aa19.46■□□□□ 0.71
TRIM50-203ENST00000488217 UBE2Q2LH0YL09 131 aa19.45■□□□□ 0.7
TRIM50-203ENST00000488217 SNAP23O00161 211 aa19.45■□□□□ 0.7
TRIM50-203ENST00000488217 TRPA1O75762 1119 aa19.45■□□□□ 0.7
TRIM50-203ENST00000488217 LMBR1LQ6UX01 489 aa19.45■□□□□ 0.7
TRIM50-203ENST00000488217 MCOLN1Q9GZU1 580 aa19.45■□□□□ 0.7
TRIM50-203ENST00000488217 CHMP3Q9Y3E7 222 aa19.45■□□□□ 0.7
TRIM50-203ENST00000488217 DGKZQ13574 1117 aa19.44■□□□□ 0.7
TRIM50-203ENST00000488217 C15orf52Q6ZUT6 534 aaKnown RBP19.44■□□□□ 0.7
TRIM50-203ENST00000488217 MOB2Q70IA6 237 aa19.44■□□□□ 0.7
TRIM50-203ENST00000488217 KIAA0825Q8IV33 1275 aa19.44■□□□□ 0.7
TRIM50-203ENST00000488217 C9orf78Q9NZ63 289 aaPredicted RBP19.44■□□□□ 0.7
TRIM50-203ENST00000488217 GRM8O00222 908 aa19.43■□□□□ 0.7
TRIM50-203ENST00000488217 CCDC57Q2TAC2 916 aa19.43■□□□□ 0.7
TRIM50-203ENST00000488217 EPHA10Q5JZY3 1008 aa19.43■□□□□ 0.7
TRIM50-203ENST00000488217 THSD7BQ9C0I4 1608 aa19.43■□□□□ 0.7
TRIM50-203ENST00000488217 SCN9AQ15858 1988 aa19.43■□□□□ 0.7
TRIM50-203ENST00000488217 ALDH1L1O75891 902 aa19.42■□□□□ 0.7
TRIM50-203ENST00000488217 TTLL12Q14166 644 aaPredicted RBP19.42■□□□□ 0.7
TRIM50-203ENST00000488217 LDHAL6AQ6ZMR3 332 aa19.42■□□□□ 0.7
TRIM50-203ENST00000488217 RASAL3Q86YV0 1011 aa19.42■□□□□ 0.7
TRIM50-203ENST00000488217 ZBED3Q96IU2 234 aaPredicted RBP19.42■□□□□ 0.7
TRIM50-203ENST00000488217 SASH1O94885 1247 aa19.41■□□□□ 0.7
TRIM50-203ENST00000488217 NF2P35240 595 aa19.41■□□□□ 0.7
TRIM50-203ENST00000488217 SLC4A10Q6U841 1118 aa19.41■□□□□ 0.7
TRIM50-203ENST00000488217 ZNF594Q96JF6 807 aaPredicted RBP19.41■□□□□ 0.7
TRIM50-203ENST00000488217 PLIN1O60240 522 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 IL1R1P14778 569 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 RGS19P49795 217 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 TAF7LQ5H9L4 462 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 CNNM1Q9NRU3 951 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 IRS2Q9Y4H2 1338 aa19.4■□□□□ 0.7
TRIM50-203ENST00000488217 ZNF804AQ7Z570 1209 aa19.39■□□□□ 0.69
TRIM50-203ENST00000488217 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
TRIM50-203ENST00000488217 CERS5Q8N5B7 392 aa19.39■□□□□ 0.69
TRIM50-203ENST00000488217 ARMC9Q7Z3E5 817 aa19.38■□□□□ 0.69
TRIM50-203ENST00000488217 MTMR14Q8NCE2 650 aa19.38■□□□□ 0.69
TRIM50-203ENST00000488217 POLR2AP24928 1970 aaKnown RBP19.37■□□□□ 0.69
TRIM50-203ENST00000488217 TM4SF4P48230 202 aa19.37■□□□□ 0.69
TRIM50-203ENST00000488217 FKBP1AP62942 108 aaKnown RBP19.37■□□□□ 0.69
TRIM50-203ENST00000488217 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
TRIM50-203ENST00000488217 DEFB129Q9H1M3 183 aa19.37■□□□□ 0.69
TRIM50-203ENST00000488217 F8W031 263 aaPredicted RBP19.36■□□□□ 0.69
TRIM50-203ENST00000488217 MLLT1Q03111 559 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms