RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 AKAP2Q9Y2D5 859 aa19.45■□□□□ 0.7
C9orf3-219ENST00000488186 MED23Q9ULK4 1368 aa19.44■□□□□ 0.7
C9orf3-219ENST00000488186 ECE2O60344 883 aa19.44■□□□□ 0.7
C9orf3-219ENST00000488186 TFCP2Q12800 502 aa19.44■□□□□ 0.7
C9orf3-219ENST00000488186 CAVIN4Q5BKX8 364 aa19.44■□□□□ 0.7
C9orf3-219ENST00000488186 ZNF804AQ7Z570 1209 aa19.44■□□□□ 0.7
C9orf3-219ENST00000488186 ERC1Q8IUD2 1116 aa19.44■□□□□ 0.7
C9orf3-219ENST00000488186 ATP2B3Q16720 1220 aa19.43■□□□□ 0.7
C9orf3-219ENST00000488186 SIRT2Q8IXJ6 389 aa19.43■□□□□ 0.7
C9orf3-219ENST00000488186 LPIN2Q92539 896 aa19.43■□□□□ 0.7
C9orf3-219ENST00000488186 L3MBTL3Q96JM7 780 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-219ENST00000488186 COA1Q9GZY4 146 aa19.43■□□□□ 0.7
C9orf3-219ENST00000488186 EXOC6BQ9Y2D4 811 aa19.43■□□□□ 0.7
C9orf3-219ENST00000488186 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
C9orf3-219ENST00000488186 SCN4AP35499 1836 aa19.43■□□□□ 0.7
C9orf3-219ENST00000488186 APBB1O00213 710 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 NEFLP07196 543 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 PODNQ7Z5L7 613 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 GPC2Q8N158 579 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 VGLL2Q8N8G2 317 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 ZNF526Q8TF50 670 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-219ENST00000488186 NEUROD6Q96NK8 337 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 PCDHB15Q9Y5E8 787 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 GJA3Q9Y6H8 435 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 COL4A5P29400 1685 aa19.42■□□□□ 0.7
C9orf3-219ENST00000488186 KIF3CO14782 793 aa19.41■□□□□ 0.7
C9orf3-219ENST00000488186 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
C9orf3-219ENST00000488186 VEGFAP15692 232 aaPredicted RBP19.41■□□□□ 0.7
C9orf3-219ENST00000488186 KLRK1P26718 216 aa19.41■□□□□ 0.7
C9orf3-219ENST00000488186 HIBADHP31937 336 aaKnown RBP19.41■□□□□ 0.7
C9orf3-219ENST00000488186 TNIP1Q15025 636 aa19.41■□□□□ 0.7
C9orf3-219ENST00000488186 C15orf52Q6ZUT6 534 aaKnown RBP19.41■□□□□ 0.7
C9orf3-219ENST00000488186 TXNRD3Q86VQ6 643 aa19.41■□□□□ 0.7
C9orf3-219ENST00000488186 FBXW7Q969H0 707 aa19.41■□□□□ 0.7
C9orf3-219ENST00000488186 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
C9orf3-219ENST00000488186 RAB11FIP3O75154 756 aa19.4■□□□□ 0.7
C9orf3-219ENST00000488186 RAD17O75943 681 aa19.4■□□□□ 0.7
C9orf3-219ENST00000488186 GORABQ5T7V8 394 aa19.4■□□□□ 0.7
C9orf3-219ENST00000488186 CIAPIN1Q6FI81 312 aa19.4■□□□□ 0.7
C9orf3-219ENST00000488186 SASH1O94885 1247 aa19.39■□□□□ 0.69
C9orf3-219ENST00000488186 FGFR2P21802 821 aa19.39■□□□□ 0.69
C9orf3-219ENST00000488186 GYG1P46976 350 aa19.39■□□□□ 0.69
C9orf3-219ENST00000488186 TIMM10P62072 90 aa19.39■□□□□ 0.69
C9orf3-219ENST00000488186 CXCL9Q07325 125 aa19.39■□□□□ 0.69
C9orf3-219ENST00000488186 CD209Q9NNX6 404 aa19.39■□□□□ 0.69
C9orf3-219ENST00000488186 A0A1B0GUL6 1792 aa19.38■□□□□ 0.69
C9orf3-219ENST00000488186 A0A1B0GUL7 405 aa19.38■□□□□ 0.69
C9orf3-219ENST00000488186 IQCA1LA6NCM1 817 aa19.38■□□□□ 0.69
C9orf3-219ENST00000488186 DDNO94850 711 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-219ENST00000488186 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
C9orf3-219ENST00000488186 ZNF541Q9H0D2 1346 aa19.38■□□□□ 0.69
C9orf3-219ENST00000488186 RWDD1Q9H446 243 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-219ENST00000488186 NMRK2Q9NPI5 230 aa19.38■□□□□ 0.69
C9orf3-219ENST00000488186 GNL3LQ9NVN8 582 aaKnown RBP19.38■□□□□ 0.69
C9orf3-219ENST00000488186 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-219ENST00000488186 USP17L3A6NCW0 530 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 USP17L4A6NCW7 530 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 YDJCA8MPS7 323 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 POTECB2RU33 542 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 TOMM70O94826 608 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 BCAMP50895 628 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 USP17L1Q7RTZ2 530 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 FAM84BQ96KN1 310 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-219ENST00000488186 GPR108Q9NPR9 543 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 PSME4Q14997 1843 aa19.37■□□□□ 0.69
C9orf3-219ENST00000488186 TTLL5Q6EMB2 1281 aa19.36■□□□□ 0.69
C9orf3-219ENST00000488186 FBXO33Q7Z6M2 555 aa19.36■□□□□ 0.69
C9orf3-219ENST00000488186 CLASRPQ8N2M8 674 aaKnown RBP19.36■□□□□ 0.69
C9orf3-219ENST00000488186 RHPN1Q8TCX5 695 aa19.36■□□□□ 0.69
C9orf3-219ENST00000488186 RRAGCQ9HB90 399 aa19.36■□□□□ 0.69
C9orf3-219ENST00000488186 KCNQ5Q9NR82 932 aa19.36■□□□□ 0.69
C9orf3-219ENST00000488186 PSMD14O00487 310 aa19.35■□□□□ 0.69
C9orf3-219ENST00000488186 GTF2IP78347 998 aa19.35■□□□□ 0.69
C9orf3-219ENST00000488186 TNNI3KQ59H18 835 aa19.35■□□□□ 0.69
C9orf3-219ENST00000488186 XAGE2Q96GT9 111 aa19.35■□□□□ 0.69
C9orf3-219ENST00000488186 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
C9orf3-219ENST00000488186 IL1RAPL2Q9NP60 686 aa19.35■□□□□ 0.69
C9orf3-219ENST00000488186 FPGT-TNNI3KV9GXZ4 949 aa19.35■□□□□ 0.69
C9orf3-219ENST00000488186 ZNF609O15014 1411 aa19.34■□□□□ 0.69
C9orf3-219ENST00000488186 IRS2Q9Y4H2 1338 aa19.34■□□□□ 0.69
C9orf3-219ENST00000488186 IL1R1P14778 569 aa19.34■□□□□ 0.69
C9orf3-219ENST00000488186 LMOD1P29536 600 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-219ENST00000488186 RBM46Q8TBY0 533 aaKnown RBP19.34■□□□□ 0.69
C9orf3-219ENST00000488186 LRRCC1Q9C099 1032 aa19.34■□□□□ 0.69
C9orf3-219ENST00000488186 IQSEC3Q9UPP2 1182 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-219ENST00000488186 IFIT2P09913 472 aaKnown RBP19.33■□□□□ 0.68
C9orf3-219ENST00000488186 ADORA1P30542 326 aa19.33■□□□□ 0.68
C9orf3-219ENST00000488186 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.68
C9orf3-219ENST00000488186 CCDC158Q5M9N0 1113 aa19.33■□□□□ 0.68
C9orf3-219ENST00000488186 STRIP1Q5VSL9 837 aa19.33■□□□□ 0.68
C9orf3-219ENST00000488186 AACSQ86V21 672 aa19.33■□□□□ 0.68
C9orf3-219ENST00000488186 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.68
C9orf3-219ENST00000488186 SCN9AQ15858 1988 aa19.32■□□□□ 0.68
C9orf3-219ENST00000488186 VIL1P09327 827 aaKnown RBP19.32■□□□□ 0.68
C9orf3-219ENST00000488186 C1QTNF8P60827 252 aa19.32■□□□□ 0.68
C9orf3-219ENST00000488186 CHAF1AQ13111 956 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-219ENST00000488186 TDRD7Q8NHU6 1098 aaKnown RBP19.32■□□□□ 0.68
C9orf3-219ENST00000488186 DPF2Q92785 391 aa19.32■□□□□ 0.68
C9orf3-219ENST00000488186 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
C9orf3-219ENST00000488186 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms