RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 PLA2G12BQ9BX93 195 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 RBSNQ9H1K0 784 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 TOMM22Q9NS69 142 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 HOOK1Q9UJC3 728 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 THRAP3Q9Y2W1 955 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 RGPD5Q99666 1765 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ARFGEF2Q9Y6D5 1785 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 BECN2A8MW95 431 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 NBPF26B4DH59 902 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ERVV-1B6SEH8 477 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 PFKFB2O60825 505 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 IDH1O75874 414 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 AKAP17AQ02040 695 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 PUM3Q15397 648 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 SAFBQ15424 915 aaKnown RBP eCLIP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 NBPF14Q5TI25 921 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 NAA16Q6N069 864 aaPredicted RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 NBPF10Q6P3W6 841 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 GIGYF2Q6Y7W6 1299 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 NBPF15Q8N660 670 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 KAZALD1Q96I82 304 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF594Q96JF6 807 aaPredicted RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 CDC5LQ99459 802 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 TMEM63CQ9P1W3 806 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 MTMR6Q9Y217 621 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 GOLGA8BA8MQT2 603 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 GNAT2P19087 354 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ATP6V1AP38606 617 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 IL6STP40189 918 aaPredicted RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 TIMM10P62072 90 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 TRIM28Q13263 835 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 DHX8Q14562 1220 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 STK38Q15208 465 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 LRRC24Q50LG9 513 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 USPL1Q5W0Q7 1092 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF589Q86UQ0 364 aaPredicted RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 FERMT3Q86UX7 667 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 GAS2L3Q86XJ1 694 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 JMYQ8N9B5 988 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 FAM89AQ96GI7 184 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 CNNM2Q9H8M5 875 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC87Q9NVE4 849 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ELP1O95163 1332 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 STRCQ7RTU9 1775 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 PTPDC1A2A3K4 754 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 E7EWF7 191 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 PRC1O43663 620 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 GADD45BO75293 160 aaPredicted RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 XBP1P17861 261 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ATG9AQ7Z3C6 839 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 AMOTL1Q8IY63 956 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 PIGBQ92521 554 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF274Q96GC6 653 aaPredicted RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 C8orf76Q96K31 380 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 KRT23Q9C075 422 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 COL18A1P39060 1754 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 COL14A1Q05707 1796 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 FAM177BA6PVY3 158 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 SLC3A2P08195 630 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 HSPD1P10809 573 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 ME1P48163 572 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 TDO2P48775 406 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 CASP7P55210 303 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 APOBRQ0VD83 1088 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 CDC37L1Q7L3B6 337 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 TRIM22Q8IYM9 498 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 LPIN2Q92539 896 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 EDC3Q96F86 508 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 TCEANC2Q96MN5 208 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 NOL10Q9BSC4 688 aaKnown RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 NAPBQ9H115 298 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 IL25Q9H293 177 aa3.1□□□□□ -1.91
C9orf72-205ENST00000488117 RNF41Q9H4P4 317 aaPredicted RBP3.1□□□□□ -1.91
C9orf72-205ENST00000488117 TNS2Q63HR2 1409 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 MAST3O60307 1309 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 KLF18A0A0U1RQI7 1052 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 NUTM2BA6NNL0 878 aaPredicted RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 NUTM2EB1AL46 878 aaPredicted RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 M0R2C6 588 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 LARGE1O95461 756 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 CCT2P78371 535 aaKnown RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 TOB2Q14106 344 aaPredicted RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 STX1AQ16623 288 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 CAVIN4Q5BKX8 364 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 SLC9C2Q5TAH2 1124 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 NUTM2AQ8IVF1 878 aaPredicted RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 ASAP1Q9ULH1 1129 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 KCPQ6ZWJ8 1503 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 WDR19Q8NEZ3 1342 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 CRYBG1Q9Y4K1 1723 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 ADAMTS2O95450 1211 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 HMGB2P26583 209 aaKnown RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 ZAP70P43403 619 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 METAP2P50579 478 aaKnown RBP eCLIP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 CEBPZQ03701 1054 aaKnown RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 BRAPQ7Z569 592 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 NLRP10Q86W26 655 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 CCAR1Q8IX12 1150 aaKnown RBP3.09□□□□□ -1.91
C9orf72-205ENST00000488117 NYXQ9GZU5 481 aa3.09□□□□□ -1.91
C9orf72-205ENST00000488117 BRMS1Q9HCU9 246 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms