RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 PODNQ7Z5L7 613 aa29.63■■■□□ 2.33
RHBDD3-205ENST00000488106 FTSJ3Q8IY81 847 aaKnown RBP29.63■■■□□ 2.33
RHBDD3-205ENST00000488106 TMEM57Q8N5G2 664 aa29.63■■■□□ 2.33
RHBDD3-205ENST00000488106 FBXW7Q969H0 707 aa29.63■■■□□ 2.33
RHBDD3-205ENST00000488106 CNOT7Q9UIV1 285 aaKnown RBP29.63■■■□□ 2.33
RHBDD3-205ENST00000488106 GNAI3P08754 354 aa29.62■■■□□ 2.33
RHBDD3-205ENST00000488106 USP50Q70EL3 339 aaPredicted RBP29.62■■■□□ 2.33
RHBDD3-205ENST00000488106 COA1Q9GZY4 146 aa29.62■■■□□ 2.33
RHBDD3-205ENST00000488106 HDAC5Q9UQL6 1122 aa29.62■■■□□ 2.33
RHBDD3-205ENST00000488106 VIL1P09327 827 aaKnown RBP29.61■■■□□ 2.33
RHBDD3-205ENST00000488106 RPS12P25398 132 aaKnown RBP29.61■■■□□ 2.33
RHBDD3-205ENST00000488106 MAP1SQ66K74 1059 aaPredicted RBP29.61■■■□□ 2.33
RHBDD3-205ENST00000488106 DPF2Q92785 391 aa29.61■■■□□ 2.33
RHBDD3-205ENST00000488106 RIPOR2Q9Y4F9 1068 aa29.61■■■□□ 2.33
RHBDD3-205ENST00000488106 MROH5Q6ZUA9 1318 aa29.61■■■□□ 2.33
RHBDD3-205ENST00000488106 IRS2Q9Y4H2 1338 aa29.61■■■□□ 2.33
RHBDD3-205ENST00000488106 USP17L3A6NCW0 530 aa29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 USP17L4A6NCW7 530 aa29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 H7C1D1 291 aa29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 RFX5P48382 616 aaPredicted RBP29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 HTRA3P83110 453 aa29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 METTL24Q5JXM2 366 aa29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 USP17L1Q7RTZ2 530 aa29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 TRPM4Q8TD43 1214 aa29.6■■■□□ 2.33
RHBDD3-205ENST00000488106 RSBN1LQ6PCB5 846 aaPredicted RBP29.59■■■□□ 2.33
RHBDD3-205ENST00000488106 ZNF609O15014 1411 aa29.59■■■□□ 2.33
RHBDD3-205ENST00000488106 DZIP1LQ8IYY4 767 aaKnown RBP29.58■■■□□ 2.33
RHBDD3-205ENST00000488106 ECM29Q5VYK3 1845 aa29.57■■■□□ 2.32
RHBDD3-205ENST00000488106 C15orf52Q6ZUT6 534 aaKnown RBP29.57■■■□□ 2.32
RHBDD3-205ENST00000488106 ZNF804AQ7Z570 1209 aa29.57■■■□□ 2.32
RHBDD3-205ENST00000488106 SIL1Q9H173 461 aa29.57■■■□□ 2.32
RHBDD3-205ENST00000488106 RLBP1P12271 317 aa29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 PTPN12Q05209 780 aaKnown RBP29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 TBC1D10BQ4KMP7 808 aaPredicted RBP29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 SAMD7Q7Z3H4 446 aa29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 ITPRIPQ8IWB1 547 aa29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 CNTROBQ8N137 903 aa29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 MXD3Q9BW11 206 aa29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 CD209Q9NNX6 404 aa29.56■■■□□ 2.32
RHBDD3-205ENST00000488106 EYA2O00167 538 aa29.55■■■□□ 2.32
RHBDD3-205ENST00000488106 UBE4AQ14139 1066 aa29.55■■■□□ 2.32
RHBDD3-205ENST00000488106 DACT2Q5SW24 774 aa29.54■■■□□ 2.32
RHBDD3-205ENST00000488106 RBM26Q5T8P6 1007 aaKnown RBP29.54■■■□□ 2.32
RHBDD3-205ENST00000488106 AGBL3Q8NEM8 1001 aa29.54■■■□□ 2.32
RHBDD3-205ENST00000488106 PASKQ96RG2 1323 aa29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 ITGBL1O95965 494 aaPredicted RBP29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 EGFRP00533 1210 aa29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 GNAI2P04899 355 aa29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 HIRAP54198 1017 aaPredicted RBP29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 STRIP1Q5VSL9 837 aa29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 VGLL2Q8N8G2 317 aa29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 YTHDC1Q96MU7 727 aaKnown RBP29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 RCAN3Q9UKA8 241 aa29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 PA2G4Q9UQ80 394 aaKnown RBP29.53■■■□□ 2.32
RHBDD3-205ENST00000488106 GYG1P46976 350 aa29.52■■■□□ 2.32
RHBDD3-205ENST00000488106 GTF2IP78347 998 aa29.52■■■□□ 2.32
RHBDD3-205ENST00000488106 TTLL5Q6EMB2 1281 aa29.52■■■□□ 2.32
RHBDD3-205ENST00000488106 SRGAP3O43295 1099 aa29.51■■■□□ 2.31
RHBDD3-205ENST00000488106 PDE8BO95263 885 aa29.51■■■□□ 2.31
RHBDD3-205ENST00000488106 KIF4BQ2VIQ3 1234 aa29.51■■■□□ 2.31
RHBDD3-205ENST00000488106 PANK1Q8TE04 598 aa29.51■■■□□ 2.31
RHBDD3-205ENST00000488106 GMLQ99445 158 aa29.51■■■□□ 2.31
RHBDD3-205ENST00000488106 ATG9AQ7Z3C6 839 aa29.5■■■□□ 2.31
RHBDD3-205ENST00000488106 MYO3BQ8WXR4 1341 aa29.49■■■□□ 2.31
RHBDD3-205ENST00000488106 USP17L8P0C7I0 530 aa29.49■■■□□ 2.31
RHBDD3-205ENST00000488106 IL1R1P14778 569 aa29.49■■■□□ 2.31
RHBDD3-205ENST00000488106 JAG2Q9Y219 1238 aa29.49■■■□□ 2.31
RHBDD3-205ENST00000488106 PUM3Q15397 648 aaKnown RBP29.48■■■□□ 2.31
RHBDD3-205ENST00000488106 C1orf115Q9H7X2 142 aa29.48■■■□□ 2.31
RHBDD3-205ENST00000488106 CIAO1O76071 339 aa29.47■■■□□ 2.31
RHBDD3-205ENST00000488106 HIBADHP31937 336 aaKnown RBP29.47■■■□□ 2.31
RHBDD3-205ENST00000488106 ZNF280AP59817 542 aaPredicted RBP29.47■■■□□ 2.31
RHBDD3-205ENST00000488106 MTX1Q13505 466 aa29.47■■■□□ 2.31
RHBDD3-205ENST00000488106 ZC3H15Q8WU90 426 aaKnown RBP29.47■■■□□ 2.31
RHBDD3-205ENST00000488106 FAM84BQ96KN1 310 aaPredicted RBP29.47■■■□□ 2.31
RHBDD3-205ENST00000488106 PCNTO95613 3336 aa29.47■■■□□ 2.31
RHBDD3-205ENST00000488106 TRAF5O00463 557 aa29.46■■■□□ 2.31
RHBDD3-205ENST00000488106 FMR1Q06787 632 aaKnown RBP eCLIP29.46■■■□□ 2.31
RHBDD3-205ENST00000488106 VPS37DQ86XT2 251 aa29.46■■■□□ 2.31
RHBDD3-205ENST00000488106 GLIS2Q9BZE0 524 aaPredicted RBP29.46■■■□□ 2.31
RHBDD3-205ENST00000488106 COPRSQ9NQ92 184 aa29.46■■■□□ 2.31
RHBDD3-205ENST00000488106 FBXO3Q9UK99 471 aa29.46■■■□□ 2.31
RHBDD3-205ENST00000488106 KIAA0825Q8IV33 1275 aa29.45■■■□□ 2.31
RHBDD3-205ENST00000488106 MYOZ2Q9NPC6 264 aa29.45■■■□□ 2.31
RHBDD3-205ENST00000488106 PGAP2Q9UHJ9 254 aa29.45■■■□□ 2.31
RHBDD3-205ENST00000488106 PNMA6EA0A0J9YXQ4 647 aa29.44■■■□□ 2.3
RHBDD3-205ENST00000488106 CREBZFQ9NS37 354 aa29.44■■■□□ 2.3
RHBDD3-205ENST00000488106 IQSEC3Q9UPP2 1182 aaPredicted RBP29.44■■■□□ 2.3
RHBDD3-205ENST00000488106 ASTN2O75129 1339 aaPredicted RBP29.44■■■□□ 2.3
RHBDD3-205ENST00000488106 IFIT1P09914 478 aaKnown RBP29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 SLC5A1P13866 664 aa29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 FGFR2P21802 821 aa29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 IL15P40933 162 aaPredicted RBP29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 CAVIN4Q5BKX8 364 aa29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 OGFOD1Q8N543 542 aa29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 CERS5Q8N5B7 392 aa29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 TDRD7Q8NHU6 1098 aaKnown RBP29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 GGA3Q9NZ52 723 aa29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 CEP126Q9P2H0 1117 aa29.43■■■□□ 2.3
RHBDD3-205ENST00000488106 TMEM88BA6NKF7 163 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms