RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 RIPOR2Q9Y4F9 1068 aa21.36■■□□□ 1.01
HMG20B-212ENST00000487894 VIL1P09327 827 aaKnown RBP21.35■■□□□ 1.01
HMG20B-212ENST00000487894 LRRC24Q50LG9 513 aa21.35■■□□□ 1.01
HMG20B-212ENST00000487894 C15orf52Q6ZUT6 534 aaKnown RBP21.35■■□□□ 1.01
HMG20B-212ENST00000487894 USP50Q70EL3 339 aaPredicted RBP21.35■■□□□ 1.01
HMG20B-212ENST00000487894 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
HMG20B-212ENST00000487894 DPF2Q92785 391 aa21.35■■□□□ 1.01
HMG20B-212ENST00000487894 COA1Q9GZY4 146 aa21.35■■□□□ 1.01
HMG20B-212ENST00000487894 POLR2AP24928 1970 aaKnown RBP21.35■■□□□ 1.01
HMG20B-212ENST00000487894 PLIN1O60240 522 aa21.34■■□□□ 1.01
HMG20B-212ENST00000487894 GNAI3P08754 354 aa21.34■■□□□ 1.01
HMG20B-212ENST00000487894 RPS12P25398 132 aaKnown RBP21.34■■□□□ 1.01
HMG20B-212ENST00000487894 APLP1P51693 650 aa21.34■■□□□ 1.01
HMG20B-212ENST00000487894 MICALL2Q8IY33 904 aa21.34■■□□□ 1.01
HMG20B-212ENST00000487894 CNOT7Q9UIV1 285 aaKnown RBP21.34■■□□□ 1.01
HMG20B-212ENST00000487894 CLEC11AQ9Y240 323 aa21.34■■□□□ 1.01
HMG20B-212ENST00000487894 MROH5Q6ZUA9 1318 aa21.33■■□□□ 1.01
HMG20B-212ENST00000487894 HDAC5Q9UQL6 1122 aa21.33■■□□□ 1.01
HMG20B-212ENST00000487894 PTPN12Q05209 780 aaKnown RBP21.32■■□□□ 1
HMG20B-212ENST00000487894 RSBN1LQ6PCB5 846 aaPredicted RBP21.32■■□□□ 1
HMG20B-212ENST00000487894 VGLL2Q8N8G2 317 aa21.32■■□□□ 1
HMG20B-212ENST00000487894 TRPM4Q8TD43 1214 aa21.32■■□□□ 1
HMG20B-212ENST00000487894 PASKQ96RG2 1323 aa21.31■■□□□ 1
HMG20B-212ENST00000487894 USP17L3A6NCW0 530 aa21.31■■□□□ 1
HMG20B-212ENST00000487894 USP17L4A6NCW7 530 aa21.31■■□□□ 1
HMG20B-212ENST00000487894 RLBP1P12271 317 aa21.31■■□□□ 1
HMG20B-212ENST00000487894 UBE4AQ14139 1066 aa21.31■■□□□ 1
HMG20B-212ENST00000487894 MAP1SQ66K74 1059 aaPredicted RBP21.31■■□□□ 1
HMG20B-212ENST00000487894 USP17L1Q7RTZ2 530 aa21.31■■□□□ 1
HMG20B-212ENST00000487894 DZIP1LQ8IYY4 767 aaKnown RBP21.31■■□□□ 1
HMG20B-212ENST00000487894 ECM29Q5VYK3 1845 aa21.31■■□□□ 1
HMG20B-212ENST00000487894 H7C1D1 291 aa21.3■■□□□ 1
HMG20B-212ENST00000487894 ITGBL1O95965 494 aaPredicted RBP21.3■■□□□ 1
HMG20B-212ENST00000487894 METTL24Q5JXM2 366 aa21.3■■□□□ 1
HMG20B-212ENST00000487894 DACT2Q5SW24 774 aa21.3■■□□□ 1
HMG20B-212ENST00000487894 FTSJ3Q8IY81 847 aaKnown RBP21.3■■□□□ 1
HMG20B-212ENST00000487894 AGBL3Q8NEM8 1001 aa21.3■■□□□ 1
HMG20B-212ENST00000487894 GMLQ99445 158 aa21.3■■□□□ 1
HMG20B-212ENST00000487894 CD209Q9NNX6 404 aa21.3■■□□□ 1
HMG20B-212ENST00000487894 EYA2O00167 538 aa21.29■■□□□ 1
HMG20B-212ENST00000487894 EGFRP00533 1210 aa21.29■■□□□ 1
HMG20B-212ENST00000487894 HIRAP54198 1017 aaPredicted RBP21.29■■□□□ 1
HMG20B-212ENST00000487894 HTRA3P83110 453 aa21.29■■□□□ 1
HMG20B-212ENST00000487894 MTX1Q13505 466 aa21.28■■□□□ 1
HMG20B-212ENST00000487894 STRIP1Q5VSL9 837 aa21.28■■□□□ 1
HMG20B-212ENST00000487894 ATG9AQ7Z3C6 839 aa21.28■■□□□ 1
HMG20B-212ENST00000487894 SAMD7Q7Z3H4 446 aa21.28■■□□□ 1
HMG20B-212ENST00000487894 ZNF804AQ7Z570 1209 aa21.28■■□□□ 1
HMG20B-212ENST00000487894 CNTROBQ8N137 903 aa21.28■■□□□ 1
HMG20B-212ENST00000487894 PDE8BO95263 885 aa21.27■■□□□ 1
HMG20B-212ENST00000487894 GNAI2P04899 355 aa21.27■■□□□ 1
HMG20B-212ENST00000487894 IL1R1P14778 569 aa21.27■■□□□ 1
HMG20B-212ENST00000487894 TBC1D10BQ4KMP7 808 aaPredicted RBP21.27■■□□□ 1
HMG20B-212ENST00000487894 FBXW7Q969H0 707 aa21.27■■□□□ 1
HMG20B-212ENST00000487894 MXD3Q9BW11 206 aa21.27■■□□□ 1
HMG20B-212ENST00000487894 RCAN3Q9UKA8 241 aa21.27■■□□□ 1
HMG20B-212ENST00000487894 ZNF280AP59817 542 aaPredicted RBP21.26■□□□□ 0.99
HMG20B-212ENST00000487894 ITPRIPQ8IWB1 547 aa21.26■□□□□ 0.99
HMG20B-212ENST00000487894 SIL1Q9H173 461 aa21.26■□□□□ 0.99
HMG20B-212ENST00000487894 PGAP2Q9UHJ9 254 aa21.26■□□□□ 0.99
HMG20B-212ENST00000487894 FBXO3Q9UK99 471 aa21.26■□□□□ 0.99
HMG20B-212ENST00000487894 PA2G4Q9UQ80 394 aaKnown RBP21.26■□□□□ 0.99
HMG20B-212ENST00000487894 MYO3BQ8WXR4 1341 aa21.26■□□□□ 0.99
HMG20B-212ENST00000487894 NPM3O75607 178 aaKnown RBP21.25■□□□□ 0.99
HMG20B-212ENST00000487894 CIAO1O76071 339 aa21.25■□□□□ 0.99
HMG20B-212ENST00000487894 GYG1P46976 350 aa21.25■□□□□ 0.99
HMG20B-212ENST00000487894 GTF2IP78347 998 aa21.25■□□□□ 0.99
HMG20B-212ENST00000487894 TTLL5Q6EMB2 1281 aa21.25■□□□□ 0.99
HMG20B-212ENST00000487894 COPRSQ9NQ92 184 aa21.25■□□□□ 0.99
HMG20B-212ENST00000487894 SRGAP3O43295 1099 aa21.24■□□□□ 0.99
HMG20B-212ENST00000487894 FGFR2P21802 821 aa21.24■□□□□ 0.99
HMG20B-212ENST00000487894 KIF4BQ2VIQ3 1234 aa21.24■□□□□ 0.99
HMG20B-212ENST00000487894 PANK1Q8TE04 598 aa21.24■□□□□ 0.99
HMG20B-212ENST00000487894 ZC3H15Q8WU90 426 aaKnown RBP21.24■□□□□ 0.99
HMG20B-212ENST00000487894 FAM84BQ96KN1 310 aaPredicted RBP21.24■□□□□ 0.99
HMG20B-212ENST00000487894 USP17L8P0C7I0 530 aa21.23■□□□□ 0.99
HMG20B-212ENST00000487894 PUM3Q15397 648 aaKnown RBP21.23■□□□□ 0.99
HMG20B-212ENST00000487894 ZBTB7BO15156 539 aaPredicted RBP21.22■□□□□ 0.99
HMG20B-212ENST00000487894 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
HMG20B-212ENST00000487894 RBM26Q5T8P6 1007 aaKnown RBP21.22■□□□□ 0.99
HMG20B-212ENST00000487894 IFFO2Q5TF58 517 aa21.22■□□□□ 0.99
HMG20B-212ENST00000487894 DNAJC5GQ8N7S2 189 aa21.22■□□□□ 0.99
HMG20B-212ENST00000487894 TDRD7Q8NHU6 1098 aaKnown RBP21.22■□□□□ 0.99
HMG20B-212ENST00000487894 PNMA6EA0A0J9YXQ4 647 aa21.21■□□□□ 0.99
HMG20B-212ENST00000487894 IL15P40933 162 aaPredicted RBP21.21■□□□□ 0.99
HMG20B-212ENST00000487894 FMR1Q06787 632 aaKnown RBP eCLIP21.21■□□□□ 0.99
HMG20B-212ENST00000487894 FBXO33Q7Z6M2 555 aa21.21■□□□□ 0.99
HMG20B-212ENST00000487894 CERS5Q8N5B7 392 aa21.21■□□□□ 0.99
HMG20B-212ENST00000487894 C1orf115Q9H7X2 142 aa21.21■□□□□ 0.99
HMG20B-212ENST00000487894 MYOZ2Q9NPC6 264 aa21.21■□□□□ 0.99
HMG20B-212ENST00000487894 CREBZFQ9NS37 354 aa21.21■□□□□ 0.99
HMG20B-212ENST00000487894 TRAF5O00463 557 aa21.2■□□□□ 0.98
HMG20B-212ENST00000487894 GLIS2Q9BZE0 524 aaPredicted RBP21.2■□□□□ 0.98
HMG20B-212ENST00000487894 JAG2Q9Y219 1238 aa21.2■□□□□ 0.98
HMG20B-212ENST00000487894 FAM205AQ6ZU69 1335 aa21.2■□□□□ 0.98
HMG20B-212ENST00000487894 SASH1O94885 1247 aa21.19■□□□□ 0.98
HMG20B-212ENST00000487894 IFIT1P09914 478 aaKnown RBP21.19■□□□□ 0.98
HMG20B-212ENST00000487894 MS4A1P11836 297 aa21.19■□□□□ 0.98
HMG20B-212ENST00000487894 FKBP1AP62942 108 aaKnown RBP21.19■□□□□ 0.98
HMG20B-212ENST00000487894 KIAA0825Q8IV33 1275 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms